RNA–Protein interactions for RNA: ENST00000373836.4

PHACTR4-201, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PHACTR4, Length 3,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-201ENST00000373836 SHANK3Q9BYB0 1731 aa7.11□□□□□ -1.27
PHACTR4-201ENST00000373836 NPHP1O15259 732 aa7.11□□□□□ -1.27
PHACTR4-201ENST00000373836 GNAI1P63096 354 aa7.11□□□□□ -1.27
PHACTR4-201ENST00000373836 CCDC184Q52MB2 194 aa7.11□□□□□ -1.27
PHACTR4-201ENST00000373836 HEG1Q9ULI3 1381 aa7.11□□□□□ -1.27
PHACTR4-201ENST00000373836 MSL1Q68DK7 614 aa7.11□□□□□ -1.27
PHACTR4-201ENST00000373836 SLC4A9Q96Q91 983 aa7.11□□□□□ -1.27
PHACTR4-201ENST00000373836 PDGFDQ9GZP0 370 aaPredicted RBP7.11□□□□□ -1.27
PHACTR4-201ENST00000373836 RGPD3A6NKT7 1758 aaPredicted RBP7.11□□□□□ -1.27
PHACTR4-201ENST00000373836 RGPD4Q7Z3J3 1758 aa7.11□□□□□ -1.27
PHACTR4-201ENST00000373836 KCNQ3O43525 872 aa7.1□□□□□ -1.27
PHACTR4-201ENST00000373836 CYP19A1P11511 503 aaPredicted RBP7.1□□□□□ -1.27
PHACTR4-201ENST00000373836 NGEFQ8N5V2 710 aa7.1□□□□□ -1.27
PHACTR4-201ENST00000373836 ITGB4P16144 1822 aa7.1□□□□□ -1.27
PHACTR4-201ENST00000373836 CCER2I3L3R5 266 aa7.1□□□□□ -1.27
PHACTR4-201ENST00000373836 EIF2S2P20042 333 aaKnown RBP7.1□□□□□ -1.27
PHACTR4-201ENST00000373836 ARHGEF1Q92888 912 aaKnown RBP7.1□□□□□ -1.27
PHACTR4-201ENST00000373836 PARP3Q9Y6F1 533 aa7.1□□□□□ -1.27
PHACTR4-201ENST00000373836 SENP3-EIF4A1A0A087X0R7 540 aa7.09□□□□□ -1.27
PHACTR4-201ENST00000373836 ZBTB1Q9Y2K1 713 aa7.09□□□□□ -1.27
PHACTR4-201ENST00000373836 RREB1Q92766 1687 aa7.09□□□□□ -1.27
PHACTR4-201ENST00000373836 A1BGP04217 495 aa7.09□□□□□ -1.27
PHACTR4-201ENST00000373836 IL6STP40189 918 aaPredicted RBP7.09□□□□□ -1.27
PHACTR4-201ENST00000373836 ZNF652Q9Y2D9 606 aa7.09□□□□□ -1.27
PHACTR4-201ENST00000373836 USP16Q9Y5T5 823 aa7.09□□□□□ -1.27
PHACTR4-201ENST00000373836 NUP188Q5SRE5 1749 aa7.09□□□□□ -1.27
PHACTR4-201ENST00000373836 TOGARAM1Q9Y4F4 1720 aa7.08□□□□□ -1.28
PHACTR4-201ENST00000373836 EIF4A1P60842 406 aaKnown RBP7.08□□□□□ -1.28
PHACTR4-201ENST00000373836 SMIM5Q71RC9 77 aa7.08□□□□□ -1.28
PHACTR4-201ENST00000373836 TRIM35Q9UPQ4 493 aa7.08□□□□□ -1.28
PHACTR4-201ENST00000373836 SCN11AQ9UI33 1791 aa7.08□□□□□ -1.28
PHACTR4-201ENST00000373836 INTS5Q6P9B9 1019 aaKnown RBP7.08□□□□□ -1.28
PHACTR4-201ENST00000373836 IFT57Q9NWB7 429 aa7.08□□□□□ -1.28
PHACTR4-201ENST00000373836 CHL1O00533 1208 aa7.07□□□□□ -1.28
PHACTR4-201ENST00000373836 GIGYF1O75420 1035 aaPredicted RBP7.07□□□□□ -1.28
PHACTR4-201ENST00000373836 MMP10P09238 476 aa7.07□□□□□ -1.28
PHACTR4-201ENST00000373836 MRC1P22897 1456 aa7.07□□□□□ -1.28
PHACTR4-201ENST00000373836 KIF6Q6ZMV9 814 aa7.07□□□□□ -1.28
PHACTR4-201ENST00000373836 PELP1Q8IZL8 1130 aaKnown RBP7.07□□□□□ -1.28
PHACTR4-201ENST00000373836 NARFQ9UHQ1 456 aa7.07□□□□□ -1.28
PHACTR4-201ENST00000373836 TBC1D2BQ9UPU7 963 aa7.07□□□□□ -1.28
PHACTR4-201ENST00000373836 MYL6BP14649 208 aa7.07□□□□□ -1.28
PHACTR4-201ENST00000373836 GTF2E1P29083 439 aaPredicted RBP7.07□□□□□ -1.28
PHACTR4-201ENST00000373836 USPL1Q5W0Q7 1092 aa7.07□□□□□ -1.28
PHACTR4-201ENST00000373836 DZIP3Q86Y13 1208 aaKnown RBP7.07□□□□□ -1.28
PHACTR4-201ENST00000373836 SOS1Q07889 1333 aaPredicted RBP7.07□□□□□ -1.28
PHACTR4-201ENST00000373836 CCDC27Q2M243 656 aa7.07□□□□□ -1.28
PHACTR4-201ENST00000373836 HDGFL1Q5TGJ6 251 aa7.07□□□□□ -1.28
PHACTR4-201ENST00000373836 BICDL1Q6ZP65 573 aa7.07□□□□□ -1.28
PHACTR4-201ENST00000373836 NECTIN2Q92692 538 aa7.07□□□□□ -1.28
PHACTR4-201ENST00000373836 FHDC1Q9C0D6 1143 aaPredicted RBP7.07□□□□□ -1.28
PHACTR4-201ENST00000373836 LY75O60449 1722 aa7.07□□□□□ -1.28
PHACTR4-201ENST00000373836 COL15A1P39059 1388 aa7.06□□□□□ -1.28
PHACTR4-201ENST00000373836 ELL2O00472 640 aaPredicted RBP7.06□□□□□ -1.28
PHACTR4-201ENST00000373836 EIF5P55010 431 aaKnown RBP7.06□□□□□ -1.28
PHACTR4-201ENST00000373836 GOLGA2Q08379 1002 aa7.06□□□□□ -1.28
PHACTR4-201ENST00000373836 WWC1Q8IX03 1113 aa7.06□□□□□ -1.28
PHACTR4-201ENST00000373836 SETDB2Q96T68 719 aa7.06□□□□□ -1.28
PHACTR4-201ENST00000373836 MYH16Q9H6N6 1097 aa7.06□□□□□ -1.28
PHACTR4-201ENST00000373836 SRP68Q9UHB9 627 aaKnown RBP7.06□□□□□ -1.28
PHACTR4-201ENST00000373836 USP42Q9H9J4 1324 aaKnown RBP7.06□□□□□ -1.28
PHACTR4-201ENST00000373836 GYS1P13807 737 aa7.06□□□□□ -1.28
PHACTR4-201ENST00000373836 PTGER2P43116 358 aa7.06□□□□□ -1.28
PHACTR4-201ENST00000373836 GPR162Q16538 588 aa7.06□□□□□ -1.28
PHACTR4-201ENST00000373836 WDR63Q8IWG1 891 aa7.06□□□□□ -1.28
PHACTR4-201ENST00000373836 MIER1Q8N108 512 aa7.06□□□□□ -1.28
PHACTR4-201ENST00000373836 STK31Q9BXU1 1019 aa7.06□□□□□ -1.28
PHACTR4-201ENST00000373836 C4BP0C0L5 1744 aa7.06□□□□□ -1.28
PHACTR4-201ENST00000373836 ERBB4Q15303 1308 aa7.06□□□□□ -1.28
PHACTR4-201ENST00000373836 PRAMEF22A3QJZ6 481 aa7.05□□□□□ -1.28
PHACTR4-201ENST00000373836 PIP4K2AP48426 406 aaPredicted RBP7.05□□□□□ -1.28
PHACTR4-201ENST00000373836 DUSP27Q5VZP5 1158 aa7.05□□□□□ -1.28
PHACTR4-201ENST00000373836 SYT17Q9BSW7 474 aa7.05□□□□□ -1.28
PHACTR4-201ENST00000373836 MBIPQ9NS73 344 aa7.05□□□□□ -1.28
PHACTR4-201ENST00000373836 HOXB7P09629 217 aa7.05□□□□□ -1.28
PHACTR4-201ENST00000373836 CD2APQ9Y5K6 639 aa7.05□□□□□ -1.28
PHACTR4-201ENST00000373836 C5P01031 1676 aa7.05□□□□□ -1.28
PHACTR4-201ENST00000373836 AIMP1Q12904 312 aaKnown RBP7.05□□□□□ -1.28
PHACTR4-201ENST00000373836 CCDC30Q5VVM6 783 aa7.05□□□□□ -1.28
PHACTR4-201ENST00000373836 AMIGO3Q86WK7 504 aa7.05□□□□□ -1.28
PHACTR4-201ENST00000373836 DBF4Q9UBU7 674 aaPredicted RBP7.05□□□□□ -1.28
PHACTR4-201ENST00000373836 IL16Q14005 1332 aa7.04□□□□□ -1.28
PHACTR4-201ENST00000373836 VASPP50552 380 aaPredicted RBP7.04□□□□□ -1.28
PHACTR4-201ENST00000373836 CLEC4GQ6UXB4 293 aa7.04□□□□□ -1.28
PHACTR4-201ENST00000373836 DDX58O95786 925 aaKnown RBP7.03□□□□□ -1.28
PHACTR4-201ENST00000373836 DDX21Q9NR30 783 aaKnown RBP eCLIP7.03□□□□□ -1.28
PHACTR4-201ENST00000373836 HYPKQ9NX55 129 aa7.03□□□□□ -1.28
PHACTR4-201ENST00000373836 NIP7Q9Y221 180 aaKnown RBP eCLIP7.03□□□□□ -1.28
PHACTR4-201ENST00000373836 KCPQ6ZWJ8 1503 aa7.03□□□□□ -1.28
PHACTR4-201ENST00000373836 PAPPAQ13219 1627 aa7.03□□□□□ -1.28
PHACTR4-201ENST00000373836 SERPINB2P05120 415 aa7.03□□□□□ -1.28
PHACTR4-201ENST00000373836 ST5P78524 1137 aa7.03□□□□□ -1.28
PHACTR4-201ENST00000373836 NFIXQ14938 502 aa7.03□□□□□ -1.28
PHACTR4-201ENST00000373836 HSP90AB3PQ58FF7 597 aa7.03□□□□□ -1.28
PHACTR4-201ENST00000373836 TPTE2Q6XPS3 522 aa7.03□□□□□ -1.28
PHACTR4-201ENST00000373836 NBPF5PQ86XG9 351 aaPredicted RBP7.03□□□□□ -1.28
PHACTR4-201ENST00000373836 TSR2Q969E8 191 aaKnown RBP7.03□□□□□ -1.28
PHACTR4-201ENST00000373836 SGIP1Q9BQI5 828 aa7.03□□□□□ -1.28
PHACTR4-201ENST00000373836 ZBTB3Q9H5J0 574 aa7.03□□□□□ -1.28
PHACTR4-201ENST00000373836 GTF3C3Q9Y5Q9 886 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms