RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 EVI5LQ96CN4 794 aa23.01■■□□□ 1.27
LMO4-202ENST00000370544 ITSN2Q9NZM3 1697 aa23.01■■□□□ 1.27
LMO4-202ENST00000370544 CAMK4Q16566 473 aa23■■□□□ 1.27
LMO4-202ENST00000370544 SEC63Q9UGP8 760 aaKnown RBP23■■□□□ 1.27
LMO4-202ENST00000370544 CCDC196A0A1B0GTZ2 297 aa23■■□□□ 1.27
LMO4-202ENST00000370544 ATP10BO94823 1461 aa23■■□□□ 1.27
LMO4-202ENST00000370544 ECHDC1Q9NTX5 307 aa22.99■■□□□ 1.27
LMO4-202ENST00000370544 ZNF213O14771 459 aa22.99■■□□□ 1.27
LMO4-202ENST00000370544 GPTP24298 496 aa22.99■■□□□ 1.27
LMO4-202ENST00000370544 NOM1Q5C9Z4 860 aaKnown RBP22.99■■□□□ 1.27
LMO4-202ENST00000370544 CCDC112Q8NEF3 446 aa22.99■■□□□ 1.27
LMO4-202ENST00000370544 TEX13AQ9BXU3 409 aaPredicted RBP22.99■■□□□ 1.27
LMO4-202ENST00000370544 FBXO3Q9UK99 471 aa22.98■■□□□ 1.27
LMO4-202ENST00000370544 LIMCH1Q9UPQ0 1083 aa22.98■■□□□ 1.27
LMO4-202ENST00000370544 SCAND2PQ9GZW5 306 aaPredicted RBP22.98■■□□□ 1.27
LMO4-202ENST00000370544 CWC25Q9NXE8 425 aaPredicted RBP22.98■■□□□ 1.27
LMO4-202ENST00000370544 ASXL1Q8IXJ9 1541 aa22.98■■□□□ 1.27
LMO4-202ENST00000370544 CCDC181Q5TID7 509 aa22.98■■□□□ 1.27
LMO4-202ENST00000370544 C8orf76Q96K31 380 aa22.98■■□□□ 1.27
LMO4-202ENST00000370544 CRACR2BQ8N4Y2 399 aaPredicted RBP22.97■■□□□ 1.27
LMO4-202ENST00000370544 SYCP2Q9BX26 1530 aa22.97■■□□□ 1.27
LMO4-202ENST00000370544 FILIP1Q7Z7B0 1213 aa22.97■■□□□ 1.27
LMO4-202ENST00000370544 PTPRKQ15262 1439 aa22.97■■□□□ 1.27
LMO4-202ENST00000370544 PI4KAP2A4QPH2 592 aa22.97■■□□□ 1.27
LMO4-202ENST00000370544 SKIDA1Q1XH10 827 aa22.97■■□□□ 1.27
LMO4-202ENST00000370544 FAM177A1Q8N128 213 aaPredicted RBP22.97■■□□□ 1.27
LMO4-202ENST00000370544 PI4KAP1Q8N8J0 262 aa22.97■■□□□ 1.27
LMO4-202ENST00000370544 SLC12A7Q9Y666 1083 aa22.97■■□□□ 1.27
LMO4-202ENST00000370544 CTCFLQ8NI51 663 aaPredicted RBP22.96■■□□□ 1.27
LMO4-202ENST00000370544 TTC21AQ8NDW8 1320 aa22.96■■□□□ 1.27
LMO4-202ENST00000370544 BMP2KLQ5H9B9 411 aa22.96■■□□□ 1.27
LMO4-202ENST00000370544 RANBP6O60518 1105 aaKnown RBP22.96■■□□□ 1.27
LMO4-202ENST00000370544 TBC1D9Q6ZT07 1266 aa22.96■■□□□ 1.27
LMO4-202ENST00000370544 PPP1R42Q7Z4L9 355 aa22.96■■□□□ 1.27
LMO4-202ENST00000370544 NUP160Q12769 1436 aa22.96■■□□□ 1.27
LMO4-202ENST00000370544 ATP5J2-PTCD1G3V325 749 aa22.95■■□□□ 1.27
LMO4-202ENST00000370544 FBLN1P23142 703 aa22.95■■□□□ 1.27
LMO4-202ENST00000370544 RNF41Q9H4P4 317 aaPredicted RBP22.95■■□□□ 1.26
LMO4-202ENST00000370544 RPGRQ92834 1020 aaKnown RBP22.95■■□□□ 1.26
LMO4-202ENST00000370544 A2MP01023 1474 aa22.95■■□□□ 1.26
LMO4-202ENST00000370544 ASXL2Q76L83 1435 aa22.95■■□□□ 1.26
LMO4-202ENST00000370544 IQCA1Q86XH1 822 aa22.95■■□□□ 1.26
LMO4-202ENST00000370544 PPIP5K1Q6PFW1 1433 aa22.95■■□□□ 1.26
LMO4-202ENST00000370544 SNRPA1P09661 255 aaKnown RBP22.94■■□□□ 1.26
LMO4-202ENST00000370544 ERLIN2O94905 339 aa22.94■■□□□ 1.26
LMO4-202ENST00000370544 TBC1D2Q9BYX2 928 aa22.94■■□□□ 1.26
LMO4-202ENST00000370544 NUP153P49790 1475 aaKnown RBP22.94■■□□□ 1.26
LMO4-202ENST00000370544 NGLY1Q96IV0 654 aa22.94■■□□□ 1.26
LMO4-202ENST00000370544 GOLIM4O00461 696 aa22.94■■□□□ 1.26
LMO4-202ENST00000370544 CCDC183Q5T5S1 534 aa22.94■■□□□ 1.26
LMO4-202ENST00000370544 UBE3BQ7Z3V4 1068 aa22.93■■□□□ 1.26
LMO4-202ENST00000370544 CADPS2Q86UW7 1296 aa22.93■■□□□ 1.26
LMO4-202ENST00000370544 CFAP100Q494V2 611 aa22.93■■□□□ 1.26
LMO4-202ENST00000370544 EIF5P55010 431 aaKnown RBP22.93■■□□□ 1.26
LMO4-202ENST00000370544 TTC22Q5TAA0 569 aa22.93■■□□□ 1.26
LMO4-202ENST00000370544 GOLGA8BA8MQT2 603 aa22.93■■□□□ 1.26
LMO4-202ENST00000370544 IGHDP01880 384 aa22.93■■□□□ 1.26
LMO4-202ENST00000370544 GUCY1B3Q02153 619 aa22.93■■□□□ 1.26
LMO4-202ENST00000370544 TTF1Q15361 905 aaPredicted RBP22.93■■□□□ 1.26
LMO4-202ENST00000370544 ZNF444Q8N0Y2 327 aaPredicted RBP22.93■■□□□ 1.26
LMO4-202ENST00000370544 CHRNA2Q15822 529 aa22.92■■□□□ 1.26
LMO4-202ENST00000370544 GOLGA8AA7E2F4 631 aa22.92■■□□□ 1.26
LMO4-202ENST00000370544 AXDND1Q5T1B0 1012 aaPredicted RBP22.92■■□□□ 1.26
LMO4-202ENST00000370544 UHRF1BP1LA0JNW5 1464 aa22.92■■□□□ 1.26
LMO4-202ENST00000370544 SSFA2P28290 1259 aa22.92■■□□□ 1.26
LMO4-202ENST00000370544 ARHGAP45Q92619 1136 aa22.92■■□□□ 1.26
LMO4-202ENST00000370544 SEPT11Q9NVA2 429 aaKnown RBP22.92■■□□□ 1.26
LMO4-202ENST00000370544 IFIT3O14879 490 aaKnown RBP22.92■■□□□ 1.26
LMO4-202ENST00000370544 LDHAL6AQ6ZMR3 332 aa22.92■■□□□ 1.26
LMO4-202ENST00000370544 PRAG1Q86YV5 1406 aa22.92■■□□□ 1.26
LMO4-202ENST00000370544 SSRP1Q08945 709 aaKnown RBP22.91■■□□□ 1.26
LMO4-202ENST00000370544 PHAXQ9H814 394 aaKnown RBP22.91■■□□□ 1.26
LMO4-202ENST00000370544 CCDC82Q8N4S0 544 aa22.91■■□□□ 1.26
LMO4-202ENST00000370544 ANO10Q9NW15 660 aa22.91■■□□□ 1.26
LMO4-202ENST00000370544 MAPKBP1O60336 1514 aa22.9■■□□□ 1.26
LMO4-202ENST00000370544 CWC15Q9P013 229 aaKnown RBP22.9■■□□□ 1.26
LMO4-202ENST00000370544 IL27Q8NEV9 243 aa22.9■■□□□ 1.26
LMO4-202ENST00000370544 ZNF518AQ6AHZ1 1483 aa22.9■■□□□ 1.26
LMO4-202ENST00000370544 SLF2Q8IX21 1173 aa22.9■■□□□ 1.26
LMO4-202ENST00000370544 CDC5LQ99459 802 aaKnown RBP22.9■■□□□ 1.26
LMO4-202ENST00000370544 EPB41L2O43491 1005 aaKnown RBP22.9■■□□□ 1.26
LMO4-202ENST00000370544 RBM10P98175 930 aaKnown RBP22.89■■□□□ 1.26
LMO4-202ENST00000370544 RIMS2Q9UQ26 1411 aa22.89■■□□□ 1.26
LMO4-202ENST00000370544 ANXA1P04083 346 aa22.89■■□□□ 1.26
LMO4-202ENST00000370544 CCT2P78371 535 aaKnown RBP22.89■■□□□ 1.26
LMO4-202ENST00000370544 TSHZ3Q63HK5 1081 aa22.89■■□□□ 1.26
LMO4-202ENST00000370544 TEX14Q8IWB6 1497 aa22.89■■□□□ 1.25
LMO4-202ENST00000370544 LARP6Q9BRS8 491 aaKnown RBP22.88■■□□□ 1.25
LMO4-202ENST00000370544 TNPO1Q92973 898 aaKnown RBP22.88■■□□□ 1.25
LMO4-202ENST00000370544 MATR3P43243 847 aaKnown RBP eCLIP22.88■■□□□ 1.25
LMO4-202ENST00000370544 ANKRD13DQ6ZTN6 518 aa22.88■■□□□ 1.25
LMO4-202ENST00000370544 CHPF2Q9P2E5 772 aa22.88■■□□□ 1.25
LMO4-202ENST00000370544 SNRKQ9NRH2 765 aa22.88■■□□□ 1.25
LMO4-202ENST00000370544 ERLIN1O75477 346 aa22.87■■□□□ 1.25
LMO4-202ENST00000370544 HDAC1Q13547 482 aaPredicted RBP22.87■■□□□ 1.25
LMO4-202ENST00000370544 CCDC96Q2M329 555 aa22.87■■□□□ 1.25
LMO4-202ENST00000370544 ESPNB1AK53 854 aa22.87■■□□□ 1.25
LMO4-202ENST00000370544 TNIP1Q15025 636 aa22.87■■□□□ 1.25
LMO4-202ENST00000370544 CATIPQ7Z7H3 387 aa22.87■■□□□ 1.25
LMO4-202ENST00000370544 GOLGA6L10A6NI86 522 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms