RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 TMEM164Q5U3C3 297 aa6.38□□□□□ -1.39
RNU4-48P-201ENST00000365559 GPAMQ9HCL2 828 aa6.38□□□□□ -1.39
RNU4-48P-201ENST00000365559 ERBB4Q15303 1308 aa6.38□□□□□ -1.39
RNU4-48P-201ENST00000365559 A0A1B0GTH6 734 aa6.37□□□□□ -1.39
RNU4-48P-201ENST00000365559 PPP1R15AO75807 674 aaPredicted RBP6.37□□□□□ -1.39
RNU4-48P-201ENST00000365559 WFS1O76024 890 aa6.37□□□□□ -1.39
RNU4-48P-201ENST00000365559 F11P03951 625 aa6.37□□□□□ -1.39
RNU4-48P-201ENST00000365559 MSX1P28360 303 aa6.37□□□□□ -1.39
RNU4-48P-201ENST00000365559 TEAD4Q15561 434 aa6.37□□□□□ -1.39
RNU4-48P-201ENST00000365559 LCE2AQ5TA79 106 aaPredicted RBP6.37□□□□□ -1.39
RNU4-48P-201ENST00000365559 SH3PXD2AQ5TCZ1 1133 aa6.37□□□□□ -1.39
RNU4-48P-201ENST00000365559 TREML4Q6UXN2 200 aa6.37□□□□□ -1.39
RNU4-48P-201ENST00000365559 RIPOR1Q6ZS17 1223 aa6.37□□□□□ -1.39
RNU4-48P-201ENST00000365559 SCG3Q8WXD2 468 aaKnown RBP6.37□□□□□ -1.39
RNU4-48P-201ENST00000365559 L3MBTL2Q969R5 705 aa6.37□□□□□ -1.39
RNU4-48P-201ENST00000365559 AIDAQ96BJ3 306 aa6.37□□□□□ -1.39
RNU4-48P-201ENST00000365559 ATAD2Q6PL18 1390 aa6.36□□□□□ -1.39
RNU4-48P-201ENST00000365559 ACIN1Q9UKV3 1341 aaKnown RBP6.36□□□□□ -1.39
RNU4-48P-201ENST00000365559 PPP1R12BO60237 982 aaPredicted RBP6.36□□□□□ -1.39
RNU4-48P-201ENST00000365559 ATP4AP20648 1035 aa6.36□□□□□ -1.39
RNU4-48P-201ENST00000365559 NOS2P35228 1153 aa6.36□□□□□ -1.39
RNU4-48P-201ENST00000365559 TXLNAP40222 546 aa6.36□□□□□ -1.39
RNU4-48P-201ENST00000365559 DBN1Q16643 649 aa6.36□□□□□ -1.39
RNU4-48P-201ENST00000365559 VWA5B2Q8N398 1253 aa6.36□□□□□ -1.39
RNU4-48P-201ENST00000365559 SLC16A10Q8TF71 515 aa6.36□□□□□ -1.39
RNU4-48P-201ENST00000365559 RUBCNLQ9H714 662 aa6.36□□□□□ -1.39
RNU4-48P-201ENST00000365559 ZNF232Q9UNY5 417 aa6.36□□□□□ -1.39
RNU4-48P-201ENST00000365559 SERTM1A2A2V5 107 aa6.35□□□□□ -1.39
RNU4-48P-201ENST00000365559 CDC14CA4D256 554 aa6.35□□□□□ -1.39
RNU4-48P-201ENST00000365559 EML1O00423 815 aa6.35□□□□□ -1.39
RNU4-48P-201ENST00000365559 THBS1P07996 1170 aa6.35□□□□□ -1.39
RNU4-48P-201ENST00000365559 PSMA6P60900 246 aaKnown RBP6.35□□□□□ -1.39
RNU4-48P-201ENST00000365559 TRIM22Q8IYM9 498 aa6.35□□□□□ -1.39
RNU4-48P-201ENST00000365559 GPR161Q8N6U8 529 aaKnown RBP6.35□□□□□ -1.39
RNU4-48P-201ENST00000365559 CHMP7Q8WUX9 453 aaPredicted RBP6.35□□□□□ -1.39
RNU4-48P-201ENST00000365559 PRMT3O60678 531 aa6.34□□□□□ -1.39
RNU4-48P-201ENST00000365559 VSIG8P0DPA2 414 aa6.34□□□□□ -1.39
RNU4-48P-201ENST00000365559 WEE1P30291 646 aa6.34□□□□□ -1.39
RNU4-48P-201ENST00000365559 SWI5Q1ZZU3 235 aa6.34□□□□□ -1.39
RNU4-48P-201ENST00000365559 NBPF1Q3BBV0 1214 aa6.34□□□□□ -1.39
RNU4-48P-201ENST00000365559 POTEAQ6S8J7 498 aa6.34□□□□□ -1.39
RNU4-48P-201ENST00000365559 NANOS1Q8WY41 292 aaKnown RBP6.34□□□□□ -1.39
RNU4-48P-201ENST00000365559 IRF7Q92985 503 aa6.34□□□□□ -1.39
RNU4-48P-201ENST00000365559 ZNF837Q96EG3 531 aaPredicted RBP6.34□□□□□ -1.39
RNU4-48P-201ENST00000365559 PRIMPOLQ96LW4 560 aa6.34□□□□□ -1.39
RNU4-48P-201ENST00000365559 C2orf49Q9BVC5 232 aaPredicted RBP6.34□□□□□ -1.39
RNU4-48P-201ENST00000365559 SLAIN2Q9P270 581 aa6.34□□□□□ -1.39
RNU4-48P-201ENST00000365559 CARNS1A5YM72 827 aa6.33□□□□□ -1.4
RNU4-48P-201ENST00000365559 IGFBP4P22692 258 aa6.33□□□□□ -1.4
RNU4-48P-201ENST00000365559 HIRAP54198 1017 aaPredicted RBP6.33□□□□□ -1.4
RNU4-48P-201ENST00000365559 OCLNQ16625 522 aa6.33□□□□□ -1.4
RNU4-48P-201ENST00000365559 SV2AQ7L0J3 742 aa6.33□□□□□ -1.4
RNU4-48P-201ENST00000365559 STAG2Q8N3U4 1231 aa6.33□□□□□ -1.4
RNU4-48P-201ENST00000365559 C1orf216Q8TAB5 229 aa6.33□□□□□ -1.4
RNU4-48P-201ENST00000365559 KLRG1Q96E93 195 aa6.33□□□□□ -1.4
RNU4-48P-201ENST00000365559 ZDHHC3Q9NYG2 299 aa6.33□□□□□ -1.4
RNU4-48P-201ENST00000365559 HCN4Q9Y3Q4 1203 aa6.33□□□□□ -1.4
RNU4-48P-201ENST00000365559 TMEM88BA6NKF7 163 aa6.32□□□□□ -1.4
RNU4-48P-201ENST00000365559 H7C1W4 665 aa6.32□□□□□ -1.4
RNU4-48P-201ENST00000365559 CSB-PGBD3P0DP91 1061 aa6.32□□□□□ -1.4
RNU4-48P-201ENST00000365559 GMPRP36959 345 aa6.32□□□□□ -1.4
RNU4-48P-201ENST00000365559 PGBD3Q8N328 593 aa6.32□□□□□ -1.4
RNU4-48P-201ENST00000365559 C7orf43Q8WVR3 580 aa6.32□□□□□ -1.4
RNU4-48P-201ENST00000365559 GTPBP3Q969Y2 492 aaKnown RBP6.32□□□□□ -1.4
RNU4-48P-201ENST00000365559 NUCKS1Q9H1E3 243 aaKnown RBP6.32□□□□□ -1.4
RNU4-48P-201ENST00000365559 CRISPLD1Q9H336 500 aa6.32□□□□□ -1.4
RNU4-48P-201ENST00000365559 A0A1W2PNR3 127 aa6.31□□□□□ -1.4
RNU4-48P-201ENST00000365559 GPR25O00155 361 aa6.31□□□□□ -1.4
RNU4-48P-201ENST00000365559 TATP17735 454 aaPredicted RBP6.31□□□□□ -1.4
RNU4-48P-201ENST00000365559 UBAP2LQ14157 1087 aaKnown RBP6.31□□□□□ -1.4
RNU4-48P-201ENST00000365559 ARSJQ5FYB0 599 aaPredicted RBP6.31□□□□□ -1.4
RNU4-48P-201ENST00000365559 CLP1Q92989 425 aaKnown RBP6.31□□□□□ -1.4
RNU4-48P-201ENST00000365559 GMCL1Q96IK5 515 aa6.31□□□□□ -1.4
RNU4-48P-201ENST00000365559 NGLY1Q96IV0 654 aa6.31□□□□□ -1.4
RNU4-48P-201ENST00000365559 ZIC5Q96T25 663 aa6.31□□□□□ -1.4
RNU4-48P-201ENST00000365559 PHACTR1Q9C0D0 580 aa6.31□□□□□ -1.4
RNU4-48P-201ENST00000365559 CHMP3Q9Y3E7 222 aa6.31□□□□□ -1.4
RNU4-48P-201ENST00000365559 FKBP5Q13451 457 aaPredicted RBP6.3□□□□□ -1.4
RNU4-48P-201ENST00000365559 RNFT1Q5M7Z0 435 aa6.3□□□□□ -1.4
RNU4-48P-201ENST00000365559 BICDL1Q6ZP65 573 aa6.3□□□□□ -1.4
RNU4-48P-201ENST00000365559 FOXO3O43524 673 aa6.29□□□□□ -1.4
RNU4-48P-201ENST00000365559 KRT76Q01546 638 aa6.29□□□□□ -1.4
RNU4-48P-201ENST00000365559 GAS6Q14393 721 aa6.29□□□□□ -1.4
RNU4-48P-201ENST00000365559 EFHC2Q5JST6 749 aa6.29□□□□□ -1.4
RNU4-48P-201ENST00000365559 C1orf53Q5VUE5 145 aa6.29□□□□□ -1.4
RNU4-48P-201ENST00000365559 ALDH16A1Q8IZ83 802 aa6.29□□□□□ -1.4
RNU4-48P-201ENST00000365559 COL25A1Q9BXS0 654 aaPredicted RBP6.29□□□□□ -1.4
RNU4-48P-201ENST00000365559 CXXC1Q9P0U4 656 aaPredicted RBP6.29□□□□□ -1.4
RNU4-48P-201ENST00000365559 ATP2B4P23634 1241 aa6.28□□□□□ -1.4
RNU4-48P-201ENST00000365559 LBRQ14739 615 aaKnown RBP6.28□□□□□ -1.4
RNU4-48P-201ENST00000365559 LRRC69Q6ZNQ3 347 aa6.28□□□□□ -1.4
RNU4-48P-201ENST00000365559 CAPN12Q6ZSI9 719 aa6.28□□□□□ -1.4
RNU4-48P-201ENST00000365559 NLRP8Q86W28 1048 aa6.28□□□□□ -1.4
RNU4-48P-201ENST00000365559 RETREG2Q8NC44 543 aa6.28□□□□□ -1.4
RNU4-48P-201ENST00000365559 RHPN1Q8TCX5 695 aa6.28□□□□□ -1.4
RNU4-48P-201ENST00000365559 ZCCHC2Q9C0B9 1178 aaKnown RBP6.28□□□□□ -1.4
RNU4-48P-201ENST00000365559 QTRT2Q9H974 415 aaKnown RBP6.28□□□□□ -1.4
RNU4-48P-201ENST00000365559 FOXR1Q6PIV2 292 aa6.27□□□□□ -1.41
RNU4-48P-201ENST00000365559 ZNF280CQ8ND82 737 aa6.27□□□□□ -1.41
RNU4-48P-201ENST00000365559 HSH2DQ96JZ2 352 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms