RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 SUPT5HO00267 1087 aaKnown RBP9.29□□□□□ -0.92
RNU4-28P-201ENST00000364739 USP17L24Q0WX57 530 aa9.29□□□□□ -0.92
RNU4-28P-201ENST00000364739 ZNF295-AS1Q8N0V1 137 aa9.29□□□□□ -0.92
RNU4-28P-201ENST00000364739 CCDC82Q8N4S0 544 aa9.29□□□□□ -0.92
RNU4-28P-201ENST00000364739 KCTD17Q8N5Z5 321 aa9.29□□□□□ -0.92
RNU4-28P-201ENST00000364739 CCDC97Q96F63 343 aaPredicted RBP9.29□□□□□ -0.92
RNU4-28P-201ENST00000364739 NIFKQ9BYG3 293 aaKnown RBP9.29□□□□□ -0.92
RNU4-28P-201ENST00000364739 RUBCNLQ9H714 662 aa9.29□□□□□ -0.92
RNU4-28P-201ENST00000364739 GPR25O00155 361 aa9.28□□□□□ -0.92
RNU4-28P-201ENST00000364739 F11P03951 625 aa9.28□□□□□ -0.92
RNU4-28P-201ENST00000364739 MSX1P28360 303 aa9.28□□□□□ -0.92
RNU4-28P-201ENST00000364739 SV2AQ7L0J3 742 aa9.28□□□□□ -0.92
RNU4-28P-201ENST00000364739 SLC9A9Q8IVB4 645 aa9.28□□□□□ -0.92
RNU4-28P-201ENST00000364739 CNTNAP3BQ96NU0 1288 aa9.28□□□□□ -0.92
RNU4-28P-201ENST00000364739 CNTNAP3Q9BZ76 1288 aa9.28□□□□□ -0.92
RNU4-28P-201ENST00000364739 TSPAN10Q9H1Z9 355 aaPredicted RBP9.28□□□□□ -0.92
RNU4-28P-201ENST00000364739 RBM19Q9Y4C8 960 aaKnown RBP9.28□□□□□ -0.92
RNU4-28P-201ENST00000364739 SEC13P55735 322 aa9.27□□□□□ -0.93
RNU4-28P-201ENST00000364739 FOXK2Q01167 660 aa9.27□□□□□ -0.93
RNU4-28P-201ENST00000364739 RASSF7Q02833 373 aa9.27□□□□□ -0.93
RNU4-28P-201ENST00000364739 SH3PXD2AQ5TCZ1 1133 aa9.27□□□□□ -0.93
RNU4-28P-201ENST00000364739 ANKMY2Q8IV38 441 aa9.27□□□□□ -0.93
RNU4-28P-201ENST00000364739 ZDHHC1Q8WTX9 485 aa9.27□□□□□ -0.93
RNU4-28P-201ENST00000364739 HINFPQ9BQA5 517 aa9.27□□□□□ -0.93
RNU4-28P-201ENST00000364739 ADAMTS8Q9UP79 889 aa9.27□□□□□ -0.93
RNU4-28P-201ENST00000364739 A0A1B0GTH6 734 aa9.26□□□□□ -0.93
RNU4-28P-201ENST00000364739 FAM196BA6NMK8 535 aa9.26□□□□□ -0.93
RNU4-28P-201ENST00000364739 GDF11O95390 407 aa9.26□□□□□ -0.93
RNU4-28P-201ENST00000364739 THBS1P07996 1170 aa9.26□□□□□ -0.93
RNU4-28P-201ENST00000364739 SRPK2P78362 688 aaKnown RBP9.26□□□□□ -0.93
RNU4-28P-201ENST00000364739 RNFT1Q5M7Z0 435 aa9.26□□□□□ -0.93
RNU4-28P-201ENST00000364739 TRIM22Q8IYM9 498 aa9.26□□□□□ -0.93
RNU4-28P-201ENST00000364739 GTPBP3Q969Y2 492 aaKnown RBP9.26□□□□□ -0.93
RNU4-28P-201ENST00000364739 ZNF837Q96EG3 531 aaPredicted RBP9.26□□□□□ -0.93
RNU4-28P-201ENST00000364739 ARXQ96QS3 562 aa9.26□□□□□ -0.93
RNU4-28P-201ENST00000364739 COL25A1Q9BXS0 654 aaPredicted RBP9.26□□□□□ -0.93
RNU4-28P-201ENST00000364739 SERPINA10Q9UK55 444 aa9.26□□□□□ -0.93
RNU4-28P-201ENST00000364739 NOS2P35228 1153 aa9.24□□□□□ -0.93
RNU4-28P-201ENST00000364739 TXLNAP40222 546 aa9.24□□□□□ -0.93
RNU4-28P-201ENST00000364739 L3MBTL2Q969R5 705 aa9.24□□□□□ -0.93
RNU4-28P-201ENST00000364739 ZNF232Q9UNY5 417 aa9.24□□□□□ -0.93
RNU4-28P-201ENST00000364739 C21orf2O43822 256 aa9.23□□□□□ -0.93
RNU4-28P-201ENST00000364739 ATP4AP20648 1035 aa9.23□□□□□ -0.93
RNU4-28P-201ENST00000364739 CHMP7Q8WUX9 453 aaPredicted RBP9.23□□□□□ -0.93
RNU4-28P-201ENST00000364739 NUCKS1Q9H1E3 243 aaKnown RBP9.23□□□□□ -0.93
RNU4-28P-201ENST00000364739 NOVA2Q9UNW9 492 aaKnown RBP9.23□□□□□ -0.93
RNU4-28P-201ENST00000364739 M0R2N6 131 aa9.22□□□□□ -0.93
RNU4-28P-201ENST00000364739 ZNF385CQ66K41 422 aaPredicted RBP9.22□□□□□ -0.93
RNU4-28P-201ENST00000364739 FAM200AQ8TCP9 573 aa9.22□□□□□ -0.93
RNU4-28P-201ENST00000364739 SCG3Q8WXD2 468 aaKnown RBP9.22□□□□□ -0.93
RNU4-28P-201ENST00000364739 KLRG1Q96E93 195 aa9.22□□□□□ -0.93
RNU4-28P-201ENST00000364739 HCN4Q9Y3Q4 1203 aa9.22□□□□□ -0.93
RNU4-28P-201ENST00000364739 ATAD2Q6PL18 1390 aa9.22□□□□□ -0.93
RNU4-28P-201ENST00000364739 H7C1W4 665 aa9.21□□□□□ -0.94
RNU4-28P-201ENST00000364739 SLURP2P0DP57 97 aa9.21□□□□□ -0.94
RNU4-28P-201ENST00000364739 CSB-PGBD3P0DP91 1061 aa9.21□□□□□ -0.94
RNU4-28P-201ENST00000364739 TEAD4Q15561 434 aa9.21□□□□□ -0.94
RNU4-28P-201ENST00000364739 ARSJQ5FYB0 599 aaPredicted RBP9.21□□□□□ -0.94
RNU4-28P-201ENST00000364739 PGBD3Q8N328 593 aa9.21□□□□□ -0.94
RNU4-28P-201ENST00000364739 ZMIZ1Q9ULJ6 1067 aa9.21□□□□□ -0.94
RNU4-28P-201ENST00000364739 SERTM1A2A2V5 107 aa9.2□□□□□ -0.94
RNU4-28P-201ENST00000364739 PPP1R12BO60237 982 aaPredicted RBP9.2□□□□□ -0.94
RNU4-28P-201ENST00000364739 GAS6Q14393 721 aa9.2□□□□□ -0.94
RNU4-28P-201ENST00000364739 SVOPQ8N4V2 548 aa9.2□□□□□ -0.94
RNU4-28P-201ENST00000364739 STK32AQ8WU08 396 aa9.2□□□□□ -0.94
RNU4-28P-201ENST00000364739 ARID3AQ99856 593 aa9.2□□□□□ -0.94
RNU4-28P-201ENST00000364739 EML1O00423 815 aa9.19□□□□□ -0.94
RNU4-28P-201ENST00000364739 NBPF1Q3BBV0 1214 aa9.19□□□□□ -0.94
RNU4-28P-201ENST00000364739 A0A1W2PNR3 127 aa9.18□□□□□ -0.94
RNU4-28P-201ENST00000364739 ARHGEF15O94989 841 aa9.18□□□□□ -0.94
RNU4-28P-201ENST00000364739 UBAP2LQ14157 1087 aaKnown RBP9.18□□□□□ -0.94
RNU4-28P-201ENST00000364739 BICDL1Q6ZP65 573 aa9.18□□□□□ -0.94
RNU4-28P-201ENST00000364739 PBXIP1Q96AQ6 731 aa9.18□□□□□ -0.94
RNU4-28P-201ENST00000364739 ZIC5Q96T25 663 aa9.18□□□□□ -0.94
RNU4-28P-201ENST00000364739 TATP17735 454 aaPredicted RBP9.17□□□□□ -0.94
RNU4-28P-201ENST00000364739 PSMA6P60900 246 aaKnown RBP9.17□□□□□ -0.94
RNU4-28P-201ENST00000364739 EFHC2Q5JST6 749 aa9.17□□□□□ -0.94
RNU4-28P-201ENST00000364739 FOXR1Q6PIV2 292 aa9.17□□□□□ -0.94
RNU4-28P-201ENST00000364739 GMCL1Q96IK5 515 aa9.17□□□□□ -0.94
RNU4-28P-201ENST00000364739 PRIMPOLQ96LW4 560 aa9.17□□□□□ -0.94
RNU4-28P-201ENST00000364739 CRISPLD1Q9H336 500 aa9.17□□□□□ -0.94
RNU4-28P-201ENST00000364739 DNMT3AQ9Y6K1 912 aaPredicted RBP9.17□□□□□ -0.94
RNU4-28P-201ENST00000364739 C7orf43Q8WVR3 580 aa9.16□□□□□ -0.94
RNU4-28P-201ENST00000364739 NGLY1Q96IV0 654 aa9.16□□□□□ -0.94
RNU4-28P-201ENST00000364739 ZCCHC2Q9C0B9 1178 aaKnown RBP9.16□□□□□ -0.94
RNU4-28P-201ENST00000364739 ZDHHC3Q9NYG2 299 aa9.16□□□□□ -0.94
RNU4-28P-201ENST00000364739 BNIP3LO60238 219 aa9.15□□□□□ -0.94
RNU4-28P-201ENST00000364739 ATG7O95352 703 aa9.15□□□□□ -0.94
RNU4-28P-201ENST00000364739 IGHA1P01876 353 aa9.15□□□□□ -0.94
RNU4-28P-201ENST00000364739 TMEM164Q5U3C3 297 aa9.15□□□□□ -0.94
RNU4-28P-201ENST00000364739 KANK3Q6NY19 840 aa9.15□□□□□ -0.94
RNU4-28P-201ENST00000364739 C1orf216Q8TAB5 229 aa9.15□□□□□ -0.94
RNU4-28P-201ENST00000364739 ABHD17AQ96GS6 310 aa9.15□□□□□ -0.94
RNU4-28P-201ENST00000364739 C2orf49Q9BVC5 232 aaPredicted RBP9.15□□□□□ -0.94
RNU4-28P-201ENST00000364739 PHACTR1Q9C0D0 580 aa9.15□□□□□ -0.94
RNU4-28P-201ENST00000364739 PRMT3O60678 531 aa9.14□□□□□ -0.95
RNU4-28P-201ENST00000364739 FAM69CQ0P6D2 419 aa9.14□□□□□ -0.95
RNU4-28P-201ENST00000364739 LRRC69Q6ZNQ3 347 aa9.14□□□□□ -0.95
RNU4-28P-201ENST00000364739 ERICH6Q7L0X2 663 aa9.14□□□□□ -0.95
RNU4-28P-201ENST00000364739 WHAMMQ8TF30 809 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms