RNA–Protein interactions for RNA: ENST00000361690.7

SRPK1-202, Transcript of SRSF protein kinase 1, humanhuman

TSL 1 (best)

Gene SRPK1, Length 4,286 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-202ENST00000361690 HDAC5Q9UQL6 1122 aa12.54□□□□□ -0.4
SRPK1-202ENST00000361690 NEXNQ0ZGT2 675 aa12.53□□□□□ -0.4
SRPK1-202ENST00000361690 C9orf78Q9NZ63 289 aaPredicted RBP12.53□□□□□ -0.4
SRPK1-202ENST00000361690 CDCA7Q9BWT1 371 aaPredicted RBP12.53□□□□□ -0.4
SRPK1-202ENST00000361690 USP16Q9Y5T5 823 aa12.53□□□□□ -0.4
SRPK1-202ENST00000361690 COL14A1Q05707 1796 aaKnown RBP12.53□□□□□ -0.4
SRPK1-202ENST00000361690 CACNA1FO60840 1977 aa12.53□□□□□ -0.4
SRPK1-202ENST00000361690 PKD1L3Q7Z443 1732 aa12.52□□□□□ -0.4
SRPK1-202ENST00000361690 SYTL4Q96C24 671 aaPredicted RBP12.52□□□□□ -0.4
SRPK1-202ENST00000361690 DCTPP1Q9H773 170 aa12.52□□□□□ -0.4
SRPK1-202ENST00000361690 SCN11AQ9UI33 1791 aa12.52□□□□□ -0.4
SRPK1-202ENST00000361690 NGLY1Q96IV0 654 aa12.52□□□□□ -0.41
SRPK1-202ENST00000361690 LRRFIP2Q9Y608 721 aaKnown RBP12.52□□□□□ -0.41
SRPK1-202ENST00000361690 XAGE3Q8WTP9 111 aa12.51□□□□□ -0.41
SRPK1-202ENST00000361690 C8orf34Q49A92 452 aa12.51□□□□□ -0.41
SRPK1-202ENST00000361690 USP44Q9H0E7 712 aa12.51□□□□□ -0.41
SRPK1-202ENST00000361690 UPF2Q9HAU5 1272 aaKnown RBP12.51□□□□□ -0.41
SRPK1-202ENST00000361690 PXDNLA1KZ92 1463 aa12.51□□□□□ -0.41
SRPK1-202ENST00000361690 BEND3Q5T5X7 828 aa12.51□□□□□ -0.41
SRPK1-202ENST00000361690 COPS6Q7L5N1 327 aa12.51□□□□□ -0.41
SRPK1-202ENST00000361690 ALDH1L1O75891 902 aa12.51□□□□□ -0.41
SRPK1-202ENST00000361690 ADAMTS7Q9UKP4 1686 aa12.5□□□□□ -0.41
SRPK1-202ENST00000361690 MRC1P22897 1456 aa12.5□□□□□ -0.41
SRPK1-202ENST00000361690 DDB1Q16531 1140 aa12.5□□□□□ -0.41
SRPK1-202ENST00000361690 ERICH6Q7L0X2 663 aa12.5□□□□□ -0.41
SRPK1-202ENST00000361690 C8orf37Q96NL8 207 aa12.5□□□□□ -0.41
SRPK1-202ENST00000361690 PIP4K2AP48426 406 aaPredicted RBP12.5□□□□□ -0.41
SRPK1-202ENST00000361690 THRAP3Q9Y2W1 955 aaKnown RBP12.5□□□□□ -0.41
SRPK1-202ENST00000361690 MYT1Q01538 1121 aa12.5□□□□□ -0.41
SRPK1-202ENST00000361690 RBM42Q9BTD8 480 aaKnown RBP12.5□□□□□ -0.41
SRPK1-202ENST00000361690 ATP10DQ9P241 1426 aa12.49□□□□□ -0.41
SRPK1-202ENST00000361690 COL22A1Q8NFW1 1626 aaPredicted RBP12.49□□□□□ -0.41
SRPK1-202ENST00000361690 ATP8B2P98198 1209 aa12.49□□□□□ -0.41
SRPK1-202ENST00000361690 LINS1Q8NG48 757 aa12.49□□□□□ -0.41
SRPK1-202ENST00000361690 VIRMAQ69YN4 1812 aaKnown RBP12.49□□□□□ -0.41
SRPK1-202ENST00000361690 ADCY9O60503 1353 aa12.49□□□□□ -0.41
SRPK1-202ENST00000361690 COL16A1Q07092 1604 aaPredicted RBP12.49□□□□□ -0.41
SRPK1-202ENST00000361690 JCADQ9P266 1359 aa12.49□□□□□ -0.41
SRPK1-202ENST00000361690 ANKRD13DQ6ZTN6 518 aa12.49□□□□□ -0.41
SRPK1-202ENST00000361690 PDIA6Q15084 440 aa12.48□□□□□ -0.41
SRPK1-202ENST00000361690 CERKQ8TCT0 537 aa12.48□□□□□ -0.41
SRPK1-202ENST00000361690 ZNF330Q9Y3S2 320 aaPredicted RBP12.48□□□□□ -0.41
SRPK1-202ENST00000361690 SPATA31A1Q5TZJ5 1347 aa12.48□□□□□ -0.41
SRPK1-202ENST00000361690 KAT6BQ8WYB5 2073 aa12.48□□□□□ -0.41
SRPK1-202ENST00000361690 SIPA1L3O60292 1781 aaPredicted RBP12.48□□□□□ -0.41
SRPK1-202ENST00000361690 ERBB4Q15303 1308 aa12.48□□□□□ -0.41
SRPK1-202ENST00000361690 CWF19L2Q2TBE0 894 aaKnown RBP12.47□□□□□ -0.41
SRPK1-202ENST00000361690 PIGBQ92521 554 aa12.47□□□□□ -0.41
SRPK1-202ENST00000361690 ARXQ96QS3 562 aa12.47□□□□□ -0.41
SRPK1-202ENST00000361690 MYD88Q99836 296 aa12.47□□□□□ -0.41
SRPK1-202ENST00000361690 TEX13AQ9BXU3 409 aaPredicted RBP12.47□□□□□ -0.41
SRPK1-202ENST00000361690 EXOC6BQ9Y2D4 811 aa12.47□□□□□ -0.41
SRPK1-202ENST00000361690 MEX3CQ5U5Q3 659 aaKnown RBP12.47□□□□□ -0.41
SRPK1-202ENST00000361690 NBPF7P0C2Y1 421 aaPredicted RBP12.47□□□□□ -0.41
SRPK1-202ENST00000361690 SRGAP3O43295 1099 aa12.46□□□□□ -0.41
SRPK1-202ENST00000361690 ASAP1Q9ULH1 1129 aa12.46□□□□□ -0.41
SRPK1-202ENST00000361690 OS9Q13438 667 aaPredicted RBP12.46□□□□□ -0.41
SRPK1-202ENST00000361690 UNC5CLQ8IV45 518 aa12.46□□□□□ -0.41
SRPK1-202ENST00000361690 PNMA6EA0A0J9YXQ4 647 aa12.46□□□□□ -0.42
SRPK1-202ENST00000361690 STARD3NLO95772 234 aa12.46□□□□□ -0.42
SRPK1-202ENST00000361690 A1BGP04217 495 aa12.46□□□□□ -0.42
SRPK1-202ENST00000361690 PPP1R42Q7Z4L9 355 aa12.46□□□□□ -0.42
SRPK1-202ENST00000361690 METTL22Q9BUU2 404 aaPredicted RBP12.46□□□□□ -0.42
SRPK1-202ENST00000361690 DAXXQ9UER7 740 aaPredicted RBP12.46□□□□□ -0.42
SRPK1-202ENST00000361690 DISP2A7MBM2 1401 aa12.46□□□□□ -0.42
SRPK1-202ENST00000361690 SPATA31A5Q5VU36 1347 aa12.46□□□□□ -0.42
SRPK1-202ENST00000361690 SPATA31A7Q8IWB4 1347 aa12.46□□□□□ -0.42
SRPK1-202ENST00000361690 GRM8O00222 908 aa12.45□□□□□ -0.42
SRPK1-202ENST00000361690 SMARCA5O60264 1052 aaPredicted RBP12.45□□□□□ -0.42
SRPK1-202ENST00000361690 SURF6O75683 361 aaKnown RBP12.45□□□□□ -0.42
SRPK1-202ENST00000361690 LRRCC1Q9C099 1032 aa12.45□□□□□ -0.42
SRPK1-202ENST00000361690 PRIM1P49642 420 aaKnown RBP12.45□□□□□ -0.42
SRPK1-202ENST00000361690 DDRGK1Q96HY6 314 aa12.45□□□□□ -0.42
SRPK1-202ENST00000361690 IPO9Q96P70 1041 aaKnown RBP12.44□□□□□ -0.42
SRPK1-202ENST00000361690 PLBD2Q8NHP8 589 aa12.44□□□□□ -0.42
SRPK1-202ENST00000361690 HSP90AB4PQ58FF6 505 aa12.44□□□□□ -0.42
SRPK1-202ENST00000361690 BMP2KLQ5H9B9 411 aa12.44□□□□□ -0.42
SRPK1-202ENST00000361690 DNAJC10Q8IXB1 793 aa12.44□□□□□ -0.42
SRPK1-202ENST00000361690 ATG3Q9NT62 314 aa12.44□□□□□ -0.42
SRPK1-202ENST00000361690 TNS2Q63HR2 1409 aa12.44□□□□□ -0.42
SRPK1-202ENST00000361690 FAM98CQ17RN3 349 aaKnown RBP12.43□□□□□ -0.42
SRPK1-202ENST00000361690 ACSBG1Q96GR2 724 aa12.43□□□□□ -0.42
SRPK1-202ENST00000361690 BARGINQ6ZT62 677 aa12.43□□□□□ -0.42
SRPK1-202ENST00000361690 C16orf71Q8IYS4 520 aaPredicted RBP12.43□□□□□ -0.42
SRPK1-202ENST00000361690 VSIG10Q8N0Z9 540 aa12.43□□□□□ -0.42
SRPK1-202ENST00000361690 SSH3Q8TE77 659 aa12.43□□□□□ -0.42
SRPK1-202ENST00000361690 SPATA31A6Q5VVP1 1343 aa12.43□□□□□ -0.42
SRPK1-202ENST00000361690 NEURL1BA8MQ27 555 aa12.42□□□□□ -0.42
SRPK1-202ENST00000361690 NBPF26B4DH59 902 aa12.42□□□□□ -0.42
SRPK1-202ENST00000361690 NBPF14Q5TI25 921 aa12.42□□□□□ -0.42
SRPK1-202ENST00000361690 NBPF10Q6P3W6 841 aaKnown RBP12.42□□□□□ -0.42
SRPK1-202ENST00000361690 NBPF15Q8N660 670 aa12.42□□□□□ -0.42
SRPK1-202ENST00000361690 ATP5J2-PTCD1G3V325 749 aa12.42□□□□□ -0.42
SRPK1-202ENST00000361690 RAB11FIP3O75154 756 aa12.42□□□□□ -0.42
SRPK1-202ENST00000361690 PLEKHM2Q8IWE5 1019 aa12.42□□□□□ -0.42
SRPK1-202ENST00000361690 MFAP1P55081 439 aaKnown RBP12.42□□□□□ -0.42
SRPK1-202ENST00000361690 ZBTB3Q9H5J0 574 aa12.42□□□□□ -0.42
SRPK1-202ENST00000361690 USP21Q9UK80 565 aa12.42□□□□□ -0.42
SRPK1-202ENST00000361690 IGKV5-2P06315 115 aa12.42□□□□□ -0.42
SRPK1-202ENST00000361690 GCKRQ14397 625 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms