RNA–Protein interactions for RNA: ENST00000336418.8

AP3S2-201, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S2, Length 5,891 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-201ENST00000336418 CDKL5O76039 1030 aa13.35□□□□□ -0.27
AP3S2-201ENST00000336418 TDRD12Q587J7 1177 aaKnown RBP13.35□□□□□ -0.27
AP3S2-201ENST00000336418 CNNM3Q8NE01 707 aa13.35□□□□□ -0.27
AP3S2-201ENST00000336418 THUMPD2Q9BTF0 503 aaKnown RBP13.35□□□□□ -0.27
AP3S2-201ENST00000336418 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.35□□□□□ -0.27
AP3S2-201ENST00000336418 CCDC171Q6TFL3 1326 aa13.35□□□□□ -0.27
AP3S2-201ENST00000336418 YEATS4O95619 227 aa13.35□□□□□ -0.27
AP3S2-201ENST00000336418 CFAP70Q5T0N1 1121 aa13.35□□□□□ -0.27
AP3S2-201ENST00000336418 OGFRQ9NZT2 677 aa13.35□□□□□ -0.27
AP3S2-201ENST00000336418 USP48Q86UV5 1035 aa13.34□□□□□ -0.27
AP3S2-201ENST00000336418 SPG7Q9UQ90 795 aa13.34□□□□□ -0.27
AP3S2-201ENST00000336418 PTGS1P23219 599 aa13.34□□□□□ -0.27
AP3S2-201ENST00000336418 PRPF4BQ13523 1007 aaKnown RBP13.34□□□□□ -0.27
AP3S2-201ENST00000336418 CCDC57Q2TAC2 916 aa13.34□□□□□ -0.27
AP3S2-201ENST00000336418 FKBP15Q5T1M5 1219 aa13.34□□□□□ -0.27
AP3S2-201ENST00000336418 GIGYF2Q6Y7W6 1299 aaKnown RBP13.34□□□□□ -0.27
AP3S2-201ENST00000336418 SULT6B1Q6IMI4 303 aa13.34□□□□□ -0.27
AP3S2-201ENST00000336418 SLC3A2P08195 630 aaKnown RBP13.33□□□□□ -0.27
AP3S2-201ENST00000336418 RAB11FIP4Q86YS3 637 aa13.33□□□□□ -0.28
AP3S2-201ENST00000336418 DDX19AQ9NUU7 478 aaKnown RBP13.33□□□□□ -0.28
AP3S2-201ENST00000336418 MACROD2A1Z1Q3 448 aa13.33□□□□□ -0.28
AP3S2-201ENST00000336418 ATF3P18847 181 aa13.33□□□□□ -0.28
AP3S2-201ENST00000336418 RARSP54136 660 aaKnown RBP13.33□□□□□ -0.28
AP3S2-201ENST00000336418 NAA25Q14CX7 972 aa13.33□□□□□ -0.28
AP3S2-201ENST00000336418 C17orf53Q8N3J3 647 aaPredicted RBP13.33□□□□□ -0.28
AP3S2-201ENST00000336418 SPECC1LQ69YQ0 1117 aa13.33□□□□□ -0.28
AP3S2-201ENST00000336418 PUF60Q9UHX1 559 aaKnown RBP13.33□□□□□ -0.28
AP3S2-201ENST00000336418 LIMCH1Q9UPQ0 1083 aa13.33□□□□□ -0.28
AP3S2-201ENST00000336418 USO1O60763 962 aaKnown RBP13.33□□□□□ -0.28
AP3S2-201ENST00000336418 SLU7O95391 586 aaKnown RBP13.33□□□□□ -0.28
AP3S2-201ENST00000336418 CCDC96Q2M329 555 aa13.33□□□□□ -0.28
AP3S2-201ENST00000336418 SOGA3Q5TF21 947 aa13.33□□□□□ -0.28
AP3S2-201ENST00000336418 CEP112Q8N8E3 955 aa13.33□□□□□ -0.28
AP3S2-201ENST00000336418 RAB11FIP3O75154 756 aa13.32□□□□□ -0.28
AP3S2-201ENST00000336418 POLR3DP05423 398 aaPredicted RBP13.32□□□□□ -0.28
AP3S2-201ENST00000336418 UBE2HP62256 183 aa13.32□□□□□ -0.28
AP3S2-201ENST00000336418 CCDC150Q8NCX0 1101 aa13.32□□□□□ -0.28
AP3S2-201ENST00000336418 C8orf76Q96K31 380 aa13.32□□□□□ -0.28
AP3S2-201ENST00000336418 CCDC85AQ96PX6 553 aaPredicted RBP13.32□□□□□ -0.28
AP3S2-201ENST00000336418 PAIP2Q9BPZ3 127 aaKnown RBP13.32□□□□□ -0.28
AP3S2-201ENST00000336418 BOLA2Q9H3K6 86 aa13.32□□□□□ -0.28
AP3S2-201ENST00000336418 FGD5Q6ZNL6 1462 aa13.32□□□□□ -0.28
AP3S2-201ENST00000336418 PUS7Q96PZ0 661 aaKnown RBP13.32□□□□□ -0.28
AP3S2-201ENST00000336418 RABEP2Q9H5N1 569 aa13.32□□□□□ -0.28
AP3S2-201ENST00000336418 KRT32Q14532 448 aa13.32□□□□□ -0.28
AP3S2-201ENST00000336418 GBP6Q6ZN66 633 aa13.32□□□□□ -0.28
AP3S2-201ENST00000336418 RAPGEF4Q8WZA2 1011 aa13.32□□□□□ -0.28
AP3S2-201ENST00000336418 NLRP2Q9NX02 1062 aa13.32□□□□□ -0.28
AP3S2-201ENST00000336418 CTAGE5O15320 804 aa13.31□□□□□ -0.28
AP3S2-201ENST00000336418 FAM160A1Q05DH4 1040 aa13.31□□□□□ -0.28
AP3S2-201ENST00000336418 DNAJC25Q9H1X3 360 aa13.31□□□□□ -0.28
AP3S2-201ENST00000336418 ZEB2O60315 1214 aa13.31□□□□□ -0.28
AP3S2-201ENST00000336418 RHOXF2BP0C7M4 288 aa13.31□□□□□ -0.28
AP3S2-201ENST00000336418 TERF1P54274 439 aa13.31□□□□□ -0.28
AP3S2-201ENST00000336418 PPARDQ03181 441 aa13.31□□□□□ -0.28
AP3S2-201ENST00000336418 CCDC6Q16204 474 aa13.31□□□□□ -0.28
AP3S2-201ENST00000336418 SSH1Q8WYL5 1049 aa13.31□□□□□ -0.28
AP3S2-201ENST00000336418 RHOXF2Q9BQY4 288 aa13.31□□□□□ -0.28
AP3S2-201ENST00000336418 RBM42Q9BTD8 480 aaKnown RBP13.31□□□□□ -0.28
AP3S2-201ENST00000336418 KIF21BO75037 1637 aa13.31□□□□□ -0.28
AP3S2-201ENST00000336418 UBAC1Q9BSL1 405 aa13.31□□□□□ -0.28
AP3S2-201ENST00000336418 SYT10Q6XYQ8 523 aa13.31□□□□□ -0.28
AP3S2-201ENST00000336418 CAPZA3Q96KX2 299 aa13.31□□□□□ -0.28
AP3S2-201ENST00000336418 CEP131Q9UPN4 1083 aa13.31□□□□□ -0.28
AP3S2-201ENST00000336418 CCDC144CPQ8IYA2 1237 aa13.3□□□□□ -0.28
AP3S2-201ENST00000336418 RPAP2Q8IXW5 612 aaPredicted RBP13.3□□□□□ -0.28
AP3S2-201ENST00000336418 OTUD6BQ8N6M0 293 aa13.3□□□□□ -0.28
AP3S2-201ENST00000336418 FBF1Q8TES7 1133 aa13.3□□□□□ -0.28
AP3S2-201ENST00000336418 ALS2CR12Q96Q35 445 aa13.3□□□□□ -0.28
AP3S2-201ENST00000336418 NACAP1Q9BZK3 213 aa13.3□□□□□ -0.28
AP3S2-201ENST00000336418 PLEKHH1Q9ULM0 1364 aa13.3□□□□□ -0.28
AP3S2-201ENST00000336418 CTAGE15A4D2H0 777 aa13.3□□□□□ -0.28
AP3S2-201ENST00000336418 CTAGE8P0CG41 777 aa13.3□□□□□ -0.28
AP3S2-201ENST00000336418 CCDC121Q6ZUS5 278 aa13.3□□□□□ -0.28
AP3S2-201ENST00000336418 CTAGE6Q86UF2 777 aa13.3□□□□□ -0.28
AP3S2-201ENST00000336418 CTAGE4Q8IX94 777 aa13.3□□□□□ -0.28
AP3S2-201ENST00000336418 GAS2L2Q8NHY3 880 aa13.3□□□□□ -0.28
AP3S2-201ENST00000336418 UBA5Q9GZZ9 404 aa13.3□□□□□ -0.28
AP3S2-201ENST00000336418 MYO1BO43795 1136 aa13.3□□□□□ -0.28
AP3S2-201ENST00000336418 USP5P45974 858 aa13.3□□□□□ -0.28
AP3S2-201ENST00000336418 KARSQ15046 597 aaKnown RBP13.3□□□□□ -0.28
AP3S2-201ENST00000336418 BMP2KQ9NSY1 1161 aaPredicted RBP13.3□□□□□ -0.28
AP3S2-201ENST00000336418 A0A1B0GUL7 405 aa13.29□□□□□ -0.28
AP3S2-201ENST00000336418 NECAB1Q8N987 351 aa13.29□□□□□ -0.28
AP3S2-201ENST00000336418 UBASH3AP57075 661 aa13.29□□□□□ -0.28
AP3S2-201ENST00000336418 AOPEPQ8N6M6 819 aa13.29□□□□□ -0.28
AP3S2-201ENST00000336418 DNAJC5BQ9UF47 199 aa13.29□□□□□ -0.28
AP3S2-201ENST00000336418 C8orf34Q49A92 452 aa13.29□□□□□ -0.28
AP3S2-201ENST00000336418 NBPF11Q86T75 865 aa13.29□□□□□ -0.28
AP3S2-201ENST00000336418 SH2B1Q9NRF2 756 aaPredicted RBP13.29□□□□□ -0.28
AP3S2-201ENST00000336418 NESP48681 1621 aa13.29□□□□□ -0.28
AP3S2-201ENST00000336418 CERS3Q8IU89 383 aa13.29□□□□□ -0.28
AP3S2-201ENST00000336418 TMX3Q96JJ7 454 aa13.29□□□□□ -0.28
AP3S2-201ENST00000336418 PDIA4P13667 645 aaKnown RBP13.28□□□□□ -0.28
AP3S2-201ENST00000336418 NLRP6P59044 892 aa13.28□□□□□ -0.28
AP3S2-201ENST00000336418 NAA15Q9BXJ9 866 aaKnown RBP13.28□□□□□ -0.28
AP3S2-201ENST00000336418 NKTRP30414 1462 aaKnown RBP13.28□□□□□ -0.28
AP3S2-201ENST00000336418 NOP2P46087 812 aaKnown RBP13.28□□□□□ -0.28
AP3S2-201ENST00000336418 MYOM3Q5VTT5 1437 aa13.28□□□□□ -0.28
AP3S2-201ENST00000336418 LARP1Q6PKG0 1096 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms