RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 SLIT3O75094 1523 aa21.63■■□□□ 1.05
LRCH3-201ENST00000334859 NCAPD2Q15021 1401 aa21.63■■□□□ 1.05
LRCH3-201ENST00000334859 BEND3Q5T5X7 828 aa21.63■■□□□ 1.05
LRCH3-201ENST00000334859 FAM43AQ8N2R8 423 aa21.63■■□□□ 1.05
LRCH3-201ENST00000334859 ZGPATQ8N5A5 531 aaKnown RBP21.63■■□□□ 1.05
LRCH3-201ENST00000334859 RNMTO43148 476 aaKnown RBP21.62■■□□□ 1.05
LRCH3-201ENST00000334859 RAB11FIP3O75154 756 aa21.62■■□□□ 1.05
LRCH3-201ENST00000334859 CLEC17AQ6ZS10 378 aa21.62■■□□□ 1.05
LRCH3-201ENST00000334859 GRPEL1Q9HAV7 217 aa21.62■■□□□ 1.05
LRCH3-201ENST00000334859 AOX1Q06278 1338 aa21.62■■□□□ 1.05
LRCH3-201ENST00000334859 PKP1Q13835 747 aa21.62■■□□□ 1.05
LRCH3-201ENST00000334859 POLA2Q14181 598 aa21.62■■□□□ 1.05
LRCH3-201ENST00000334859 CWC22Q9HCG8 908 aaKnown RBP21.62■■□□□ 1.05
LRCH3-201ENST00000334859 RHPN1Q8TCX5 695 aa21.61■■□□□ 1.05
LRCH3-201ENST00000334859 ADCY9O60503 1353 aa21.61■■□□□ 1.05
LRCH3-201ENST00000334859 DBF4Q9UBU7 674 aaPredicted RBP21.6■■□□□ 1.05
LRCH3-201ENST00000334859 ISY1Q9ULR0 285 aaKnown RBP21.6■■□□□ 1.05
LRCH3-201ENST00000334859 PALD1Q9ULE6 856 aa21.6■■□□□ 1.05
LRCH3-201ENST00000334859 ADAMTSL3P82987 1691 aa21.59■■□□□ 1.05
LRCH3-201ENST00000334859 MCTP1Q6DN14 999 aa21.59■■□□□ 1.05
LRCH3-201ENST00000334859 MAP4K4O95819 1239 aaPredicted RBP21.59■■□□□ 1.05
LRCH3-201ENST00000334859 CYP2E1P05181 493 aaPredicted RBP21.59■■□□□ 1.05
LRCH3-201ENST00000334859 KIF1BPQ96EK5 621 aa21.59■■□□□ 1.05
LRCH3-201ENST00000334859 DDX49Q9Y6V7 483 aaKnown RBP21.59■■□□□ 1.05
LRCH3-201ENST00000334859 OVOS2A0A0G2JMS6 1433 aa21.57■■□□□ 1.04
LRCH3-201ENST00000334859 OS9Q13438 667 aaPredicted RBP21.57■■□□□ 1.04
LRCH3-201ENST00000334859 KRT28Q7Z3Y7 464 aa21.57■■□□□ 1.04
LRCH3-201ENST00000334859 AXIN2Q9Y2T1 843 aa21.57■■□□□ 1.04
LRCH3-201ENST00000334859 PROSER3Q2NL68 480 aa21.57■■□□□ 1.04
LRCH3-201ENST00000334859 TMX3Q96JJ7 454 aa21.57■■□□□ 1.04
LRCH3-201ENST00000334859 MAP3K2Q9Y2U5 619 aa21.57■■□□□ 1.04
LRCH3-201ENST00000334859 TRPM3Q9HCF6 1732 aaPredicted RBP21.56■■□□□ 1.04
LRCH3-201ENST00000334859 GIGYF1O75420 1035 aaPredicted RBP21.56■■□□□ 1.04
LRCH3-201ENST00000334859 ANAPC15P60006 121 aa21.56■■□□□ 1.04
LRCH3-201ENST00000334859 KLHL40Q2TBA0 621 aa21.56■■□□□ 1.04
LRCH3-201ENST00000334859 NOL8Q76FK4 1167 aaKnown RBP21.56■■□□□ 1.04
LRCH3-201ENST00000334859 PROSER2Q86WR7 435 aaPredicted RBP21.56■■□□□ 1.04
LRCH3-201ENST00000334859 C9orf78Q9NZ63 289 aaPredicted RBP21.55■■□□□ 1.04
LRCH3-201ENST00000334859 MCM2P49736 904 aa21.55■■□□□ 1.04
LRCH3-201ENST00000334859 HSP90AB4PQ58FF6 505 aa21.55■■□□□ 1.04
LRCH3-201ENST00000334859 GAS2L3Q86XJ1 694 aa21.55■■□□□ 1.04
LRCH3-201ENST00000334859 PI4K2BQ8TCG2 481 aa21.55■■□□□ 1.04
LRCH3-201ENST00000334859 PRAMEF22A3QJZ6 481 aa21.54■■□□□ 1.04
LRCH3-201ENST00000334859 IL25Q9H293 177 aa21.54■■□□□ 1.04
LRCH3-201ENST00000334859 CAMTA1Q9Y6Y1 1673 aa21.54■■□□□ 1.04
LRCH3-201ENST00000334859 ZC3H6P61129 1189 aaKnown RBP21.53■■□□□ 1.04
LRCH3-201ENST00000334859 UPF3BQ9BZI7 483 aaKnown RBP21.53■■□□□ 1.04
LRCH3-201ENST00000334859 RGPD5Q99666 1765 aa21.53■■□□□ 1.04
LRCH3-201ENST00000334859 KIF1AQ12756 1690 aa21.52■■□□□ 1.04
LRCH3-201ENST00000334859 KSR2Q6VAB6 950 aa21.52■■□□□ 1.04
LRCH3-201ENST00000334859 C1orf167Q5SNV9 1468 aa21.52■■□□□ 1.04
LRCH3-201ENST00000334859 ERBB3P21860 1342 aa21.52■■□□□ 1.04
LRCH3-201ENST00000334859 NCLP19338 710 aaKnown RBP21.52■■□□□ 1.03
LRCH3-201ENST00000334859 CWF19L2Q2TBE0 894 aaKnown RBP21.52■■□□□ 1.03
LRCH3-201ENST00000334859 CNTROBQ8N137 903 aa21.52■■□□□ 1.03
LRCH3-201ENST00000334859 ALDH1L1O75891 902 aa21.51■■□□□ 1.03
LRCH3-201ENST00000334859 FOXD4L5Q5VV16 416 aaPredicted RBP21.51■■□□□ 1.03
LRCH3-201ENST00000334859 FOXD4L4Q8WXT5 416 aaPredicted RBP21.51■■□□□ 1.03
LRCH3-201ENST00000334859 ZDHHC9Q9Y397 364 aa21.51■■□□□ 1.03
LRCH3-201ENST00000334859 SIPA1L3O60292 1781 aaPredicted RBP21.5■■□□□ 1.03
LRCH3-201ENST00000334859 HEG1Q9ULI3 1381 aa21.5■■□□□ 1.03
LRCH3-201ENST00000334859 LMBRD1Q9NUN5 540 aa21.5■■□□□ 1.03
LRCH3-201ENST00000334859 HYPKQ9NX55 129 aa21.5■■□□□ 1.03
LRCH3-201ENST00000334859 MTX1Q13505 466 aa21.49■■□□□ 1.03
LRCH3-201ENST00000334859 RAPGEF4Q8WZA2 1011 aa21.49■■□□□ 1.03
LRCH3-201ENST00000334859 RRAGDQ9NQL2 400 aaPredicted RBP21.49■■□□□ 1.03
LRCH3-201ENST00000334859 AIMP1Q12904 312 aaKnown RBP21.49■■□□□ 1.03
LRCH3-201ENST00000334859 NLRP2Q9NX02 1062 aa21.49■■□□□ 1.03
LRCH3-201ENST00000334859 SGSM2O43147 1006 aa21.48■■□□□ 1.03
LRCH3-201ENST00000334859 CAVIN1Q6NZI2 390 aaKnown RBP21.48■■□□□ 1.03
LRCH3-201ENST00000334859 CLASRPQ8N2M8 674 aaKnown RBP21.48■■□□□ 1.03
LRCH3-201ENST00000334859 RAD50Q92878 1312 aa21.48■■□□□ 1.03
LRCH3-201ENST00000334859 PRPF40AO75400 957 aaKnown RBP21.48■■□□□ 1.03
LRCH3-201ENST00000334859 HSPA4P34932 840 aa21.48■■□□□ 1.03
LRCH3-201ENST00000334859 C19orf44Q9H6X5 657 aa21.48■■□□□ 1.03
LRCH3-201ENST00000334859 PA2G4Q9UQ80 394 aaKnown RBP21.48■■□□□ 1.03
LRCH3-201ENST00000334859 GLRX3O76003 335 aaKnown RBP21.47■■□□□ 1.03
LRCH3-201ENST00000334859 DDX58O95786 925 aaKnown RBP21.47■■□□□ 1.03
LRCH3-201ENST00000334859 CUL4AQ13619 759 aa21.47■■□□□ 1.03
LRCH3-201ENST00000334859 HDAC5Q9UQL6 1122 aa21.47■■□□□ 1.03
LRCH3-201ENST00000334859 EPB41L2O43491 1005 aaKnown RBP21.46■■□□□ 1.03
LRCH3-201ENST00000334859 CWC27Q6UX04 472 aaKnown RBP21.46■■□□□ 1.03
LRCH3-201ENST00000334859 CHAMP1Q96JM3 812 aa21.46■■□□□ 1.03
LRCH3-201ENST00000334859 TTC41PQ6P2S7 1318 aa21.46■■□□□ 1.03
LRCH3-201ENST00000334859 SLC39A6Q13433 755 aa21.46■■□□□ 1.03
LRCH3-201ENST00000334859 LINS1Q8NG48 757 aa21.46■■□□□ 1.03
LRCH3-201ENST00000334859 USP42Q9H9J4 1324 aaKnown RBP21.46■■□□□ 1.03
LRCH3-201ENST00000334859 GRM8O00222 908 aa21.45■■□□□ 1.02
LRCH3-201ENST00000334859 KIAA1211Q6ZU35 1233 aa21.45■■□□□ 1.02
LRCH3-201ENST00000334859 IL17RAQ96F46 866 aa21.45■■□□□ 1.02
LRCH3-201ENST00000334859 GPATCH3Q96I76 525 aa21.45■■□□□ 1.02
LRCH3-201ENST00000334859 DDX21Q9NR30 783 aaKnown RBP eCLIP21.45■■□□□ 1.02
LRCH3-201ENST00000334859 ALS2Q96Q42 1657 aa21.45■■□□□ 1.02
LRCH3-201ENST00000334859 ADAMTS7Q9UKP4 1686 aa21.45■■□□□ 1.02
LRCH3-201ENST00000334859 IFIT2P09913 472 aaKnown RBP21.45■■□□□ 1.02
LRCH3-201ENST00000334859 ERC1Q8IUD2 1116 aa21.45■■□□□ 1.02
LRCH3-201ENST00000334859 INTS4Q96HW7 963 aaKnown RBP21.45■■□□□ 1.02
LRCH3-201ENST00000334859 DIAPH3Q9NSV4 1193 aa21.45■■□□□ 1.02
LRCH3-201ENST00000334859 CRYBG1Q9Y4K1 1723 aa21.44■■□□□ 1.02
LRCH3-201ENST00000334859 ZNF790Q6PG37 636 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms