RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 PRPF40AO75400 957 aaKnown RBP16.39■□□□□ 0.21
TUBA1B-201ENST00000332858 CAVIN1Q6NZI2 390 aaKnown RBP16.39■□□□□ 0.21
TUBA1B-201ENST00000332858 SRCIN1Q9C0H9 1055 aa16.39■□□□□ 0.21
TUBA1B-201ENST00000332858 CWC22Q9HCG8 908 aaKnown RBP16.39■□□□□ 0.21
TUBA1B-201ENST00000332858 BABAM1Q9NWV8 329 aa16.39■□□□□ 0.21
TUBA1B-201ENST00000332858 SRGAP3O43295 1099 aa16.38■□□□□ 0.21
TUBA1B-201ENST00000332858 PTMSP20962 102 aa16.38■□□□□ 0.21
TUBA1B-201ENST00000332858 PSME1Q06323 249 aa16.38■□□□□ 0.21
TUBA1B-201ENST00000332858 BEND3Q5T5X7 828 aa16.38■□□□□ 0.21
TUBA1B-201ENST00000332858 GPT2Q8TD30 523 aa16.38■□□□□ 0.21
TUBA1B-201ENST00000332858 RGPD2P0DJD1 1756 aa16.38■□□□□ 0.21
TUBA1B-201ENST00000332858 POLA2Q14181 598 aa16.37■□□□□ 0.21
TUBA1B-201ENST00000332858 RBM27Q9P2N5 1060 aaKnown RBP16.37■□□□□ 0.21
TUBA1B-201ENST00000332858 NSFL1CQ9UNZ2 370 aaKnown RBP16.37■□□□□ 0.21
TUBA1B-201ENST00000332858 PRAMEF22A3QJZ6 481 aa16.37■□□□□ 0.21
TUBA1B-201ENST00000332858 RHPN1Q8TCX5 695 aa16.37■□□□□ 0.21
TUBA1B-201ENST00000332858 ZNF530Q6P9A1 599 aaPredicted RBP16.36■□□□□ 0.21
TUBA1B-201ENST00000332858 PI4K2BQ8TCG2 481 aa16.36■□□□□ 0.21
TUBA1B-201ENST00000332858 DNAAF4Q8WXU2 420 aa16.36■□□□□ 0.21
TUBA1B-201ENST00000332858 ORAI2Q96SN7 254 aa16.36■□□□□ 0.21
TUBA1B-201ENST00000332858 BTBD11A6QL63 1104 aa16.36■□□□□ 0.21
TUBA1B-201ENST00000332858 PROSER3Q2NL68 480 aa16.36■□□□□ 0.21
TUBA1B-201ENST00000332858 ZSCAN23Q3MJ62 389 aa16.36■□□□□ 0.21
TUBA1B-201ENST00000332858 NFAT5O94916 1531 aa16.35■□□□□ 0.21
TUBA1B-201ENST00000332858 PXDNLA1KZ92 1463 aa16.35■□□□□ 0.21
TUBA1B-201ENST00000332858 TEFQ10587 303 aa16.34■□□□□ 0.21
TUBA1B-201ENST00000332858 USP54Q70EL1 1684 aa16.34■□□□□ 0.21
TUBA1B-201ENST00000332858 CLCN1P35523 988 aa16.34■□□□□ 0.21
TUBA1B-201ENST00000332858 ADCY9O60503 1353 aa16.34■□□□□ 0.21
TUBA1B-201ENST00000332858 NASPP49321 788 aaPredicted RBP16.34■□□□□ 0.21
TUBA1B-201ENST00000332858 FOXD4L6Q3SYB3 417 aaPredicted RBP16.34■□□□□ 0.21
TUBA1B-201ENST00000332858 LMOD2Q6P5Q4 547 aa16.34■□□□□ 0.21
TUBA1B-201ENST00000332858 FOXD4L3Q6VB84 417 aaPredicted RBP16.34■□□□□ 0.21
TUBA1B-201ENST00000332858 PKNOX2Q96KN3 472 aa16.33■□□□□ 0.21
TUBA1B-201ENST00000332858 ESPNB1AK53 854 aa16.33■□□□□ 0.2
TUBA1B-201ENST00000332858 CUL4AQ13619 759 aa16.33■□□□□ 0.2
TUBA1B-201ENST00000332858 ANKLE2Q86XL3 938 aa16.33■□□□□ 0.2
TUBA1B-201ENST00000332858 LARP6Q9BRS8 491 aaKnown RBP16.33■□□□□ 0.2
TUBA1B-201ENST00000332858 MCCP23508 829 aa16.32■□□□□ 0.2
TUBA1B-201ENST00000332858 AXIN2Q9Y2T1 843 aa16.32■□□□□ 0.2
TUBA1B-201ENST00000332858 PXDNQ92626 1479 aa16.32■□□□□ 0.2
TUBA1B-201ENST00000332858 N4BP2Q86UW6 1770 aaPredicted RBP16.32■□□□□ 0.2
TUBA1B-201ENST00000332858 GCP02774 474 aa16.32■□□□□ 0.2
TUBA1B-201ENST00000332858 TMEM132AQ24JP5 1023 aa16.32■□□□□ 0.2
TUBA1B-201ENST00000332858 AKAP4Q5JQC9 854 aa16.32■□□□□ 0.2
TUBA1B-201ENST00000332858 RAB11FIP3O75154 756 aa16.32■□□□□ 0.2
TUBA1B-201ENST00000332858 PRIM1P49642 420 aaKnown RBP16.32■□□□□ 0.2
TUBA1B-201ENST00000332858 ANAPC15P60006 121 aa16.32■□□□□ 0.2
TUBA1B-201ENST00000332858 MED1Q15648 1581 aaPredicted RBP16.32■□□□□ 0.2
TUBA1B-201ENST00000332858 DTNBO60941 627 aa16.31■□□□□ 0.2
TUBA1B-201ENST00000332858 ZNF445P59923 1031 aa16.31■□□□□ 0.2
TUBA1B-201ENST00000332858 CWF19L2Q2TBE0 894 aaKnown RBP16.31■□□□□ 0.2
TUBA1B-201ENST00000332858 KIF1BPQ96EK5 621 aa16.31■□□□□ 0.2
TUBA1B-201ENST00000332858 TMEM63CQ9P1W3 806 aa16.31■□□□□ 0.2
TUBA1B-201ENST00000332858 CHD2O14647 1828 aaKnown RBP16.31■□□□□ 0.2
TUBA1B-201ENST00000332858 BRD1O95696 1058 aa16.31■□□□□ 0.2
TUBA1B-201ENST00000332858 HSPA4P34932 840 aa16.31■□□□□ 0.2
TUBA1B-201ENST00000332858 RBSNQ9H1K0 784 aa16.31■□□□□ 0.2
TUBA1B-201ENST00000332858 PA2G4Q9UQ80 394 aaKnown RBP16.31■□□□□ 0.2
TUBA1B-201ENST00000332858 RNMTO43148 476 aaKnown RBP16.3■□□□□ 0.2
TUBA1B-201ENST00000332858 RASEFQ8IZ41 740 aa16.3■□□□□ 0.2
TUBA1B-201ENST00000332858 SPG7Q9UQ90 795 aa16.3■□□□□ 0.2
TUBA1B-201ENST00000332858 MAP3K2Q9Y2U5 619 aa16.3■□□□□ 0.2
TUBA1B-201ENST00000332858 CWC27Q6UX04 472 aaKnown RBP16.3■□□□□ 0.2
TUBA1B-201ENST00000332858 KCNH5Q8NCM2 988 aa16.3■□□□□ 0.2
TUBA1B-201ENST00000332858 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.3■□□□□ 0.2
TUBA1B-201ENST00000332858 AOX1Q06278 1338 aa16.3■□□□□ 0.2
TUBA1B-201ENST00000332858 SGSM2O43147 1006 aa16.3■□□□□ 0.2
TUBA1B-201ENST00000332858 PLEKHO1Q53GL0 409 aaPredicted RBP16.3■□□□□ 0.2
TUBA1B-201ENST00000332858 ARHGEF25Q86VW2 580 aa16.3■□□□□ 0.2
TUBA1B-201ENST00000332858 TRIM44Q96DX7 344 aaPredicted RBP16.3■□□□□ 0.2
TUBA1B-201ENST00000332858 GIGYF1O75420 1035 aaPredicted RBP16.29■□□□□ 0.2
TUBA1B-201ENST00000332858 HOXB7P09629 217 aa16.29■□□□□ 0.2
TUBA1B-201ENST00000332858 KDM3BQ7LBC6 1761 aa16.29■□□□□ 0.2
TUBA1B-201ENST00000332858 MCM2P49736 904 aa16.29■□□□□ 0.2
TUBA1B-201ENST00000332858 CPA1P15085 419 aa16.28■□□□□ 0.2
TUBA1B-201ENST00000332858 GDPD2Q9HCC8 539 aa16.28■□□□□ 0.2
TUBA1B-201ENST00000332858 TRHP20396 242 aaPredicted RBP16.28■□□□□ 0.2
TUBA1B-201ENST00000332858 ANKRD24Q8TF21 1146 aa16.28■□□□□ 0.2
TUBA1B-201ENST00000332858 LSG1Q9H089 658 aaKnown RBP16.28■□□□□ 0.2
TUBA1B-201ENST00000332858 DBF4Q9UBU7 674 aaPredicted RBP16.28■□□□□ 0.2
TUBA1B-201ENST00000332858 OS9Q13438 667 aaPredicted RBP16.28■□□□□ 0.2
TUBA1B-201ENST00000332858 IL17RAQ96F46 866 aa16.28■□□□□ 0.2
TUBA1B-201ENST00000332858 SNX14Q9Y5W7 946 aa16.28■□□□□ 0.2
TUBA1B-201ENST00000332858 SYCE3A1L190 88 aa16.27■□□□□ 0.2
TUBA1B-201ENST00000332858 PPP1R9BQ96SB3 815 aa16.27■□□□□ 0.2
TUBA1B-201ENST00000332858 C1orf141Q5JVX7 400 aa16.27■□□□□ 0.19
TUBA1B-201ENST00000332858 C9orf78Q9NZ63 289 aaPredicted RBP16.27■□□□□ 0.19
TUBA1B-201ENST00000332858 RAD50Q92878 1312 aa16.26■□□□□ 0.19
TUBA1B-201ENST00000332858 AIMP1Q12904 312 aaKnown RBP16.26■□□□□ 0.19
TUBA1B-201ENST00000332858 INTS4Q96HW7 963 aaKnown RBP16.26■□□□□ 0.19
TUBA1B-201ENST00000332858 ADGRL3Q9HAR2 1447 aa16.26■□□□□ 0.19
TUBA1B-201ENST00000332858 KAZALD1Q96I82 304 aa16.26■□□□□ 0.19
TUBA1B-201ENST00000332858 CCDC173Q0VFZ6 552 aa16.25■□□□□ 0.19
TUBA1B-201ENST00000332858 CNTROBQ8N137 903 aa16.25■□□□□ 0.19
TUBA1B-201ENST00000332858 PTH1RQ03431 593 aa16.25■□□□□ 0.19
TUBA1B-201ENST00000332858 SLC39A6Q13433 755 aa16.25■□□□□ 0.19
TUBA1B-201ENST00000332858 AMOTQ4VCS5 1084 aa16.25■□□□□ 0.19
TUBA1B-201ENST00000332858 KSR2Q6VAB6 950 aa16.25■□□□□ 0.19
TUBA1B-201ENST00000332858 GADD45BO75293 160 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 178.8 ms