RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 BCAR3O75815 825 aa15.48■□□□□ 0.07
TRAK1-201ENST00000327628 CRACR2BQ8N4Y2 399 aaPredicted RBP15.48■□□□□ 0.07
TRAK1-201ENST00000327628 CDC5LQ99459 802 aaKnown RBP15.48■□□□□ 0.07
TRAK1-201ENST00000327628 STK3Q13188 491 aa15.48■□□□□ 0.07
TRAK1-201ENST00000327628 IDH1O75874 414 aaKnown RBP15.48■□□□□ 0.07
TRAK1-201ENST00000327628 MCM4P33991 863 aa15.48■□□□□ 0.07
TRAK1-201ENST00000327628 CWC27Q6UX04 472 aaKnown RBP15.48■□□□□ 0.07
TRAK1-201ENST00000327628 FEZ1Q99689 392 aa15.48■□□□□ 0.07
TRAK1-201ENST00000327628 MKNK2Q9HBH9 465 aa15.48■□□□□ 0.07
TRAK1-201ENST00000327628 PIK3R4Q99570 1358 aa15.48■□□□□ 0.07
TRAK1-201ENST00000327628 DZIP1Q86YF9 867 aaKnown RBP15.47■□□□□ 0.07
TRAK1-201ENST00000327628 TAOK3Q9H2K8 898 aa15.47■□□□□ 0.07
TRAK1-201ENST00000327628 UQCRFS1P1P0C7P4 283 aa15.47■□□□□ 0.07
TRAK1-201ENST00000327628 SFPQP23246 707 aaKnown RBP eCLIP15.47■□□□□ 0.07
TRAK1-201ENST00000327628 DENND4BO75064 1496 aaPredicted RBP15.47■□□□□ 0.07
TRAK1-201ENST00000327628 CASTP20810 708 aaKnown RBP15.47■□□□□ 0.07
TRAK1-201ENST00000327628 MATR3P43243 847 aaKnown RBP eCLIP15.47■□□□□ 0.071e-7■■■■□ 20.4
TRAK1-201ENST00000327628 NBPF8Q3BBV2 869 aa15.47■□□□□ 0.07
TRAK1-201ENST00000327628 GCOM1H8Y6P7 765 aaPredicted RBP15.47■□□□□ 0.07
TRAK1-201ENST00000327628 KIF5CO60282 957 aa15.47■□□□□ 0.07
TRAK1-201ENST00000327628 MYZAPP0CAP1 466 aa15.47■□□□□ 0.07
TRAK1-201ENST00000327628 CEBPZQ03701 1054 aaKnown RBP15.47■□□□□ 0.07
TRAK1-201ENST00000327628 ZNF444Q8N0Y2 327 aaPredicted RBP15.47■□□□□ 0.07
TRAK1-201ENST00000327628 DNAAF4Q8WXU2 420 aa15.47■□□□□ 0.07
TRAK1-201ENST00000327628 NUP160Q12769 1436 aa15.47■□□□□ 0.07
TRAK1-201ENST00000327628 GOLGA6L10A0A0M3HER8 536 aa15.46■□□□□ 0.07
TRAK1-201ENST00000327628 CCDC172P0C7W6 258 aa15.46■□□□□ 0.07
TRAK1-201ENST00000327628 MCM5P33992 734 aa15.46■□□□□ 0.07
TRAK1-201ENST00000327628 SSRP1Q08945 709 aaKnown RBP15.46■□□□□ 0.07
TRAK1-201ENST00000327628 NAA15Q9BXJ9 866 aaKnown RBP15.46■□□□□ 0.07
TRAK1-201ENST00000327628 SSBP05455 408 aaKnown RBP eCLIP15.46■□□□□ 0.07
TRAK1-201ENST00000327628 CATIPQ7Z7H3 387 aa15.46■□□□□ 0.07
TRAK1-201ENST00000327628 PHF8Q9UPP1 1060 aa15.46■□□□□ 0.07
TRAK1-201ENST00000327628 GOLIM4O00461 696 aa15.46■□□□□ 0.06
TRAK1-201ENST00000327628 C8orf76Q96K31 380 aa15.46■□□□□ 0.06
TRAK1-201ENST00000327628 FERMT1Q9BQL6 677 aa15.46■□□□□ 0.06
TRAK1-201ENST00000327628 STAMBPO95630 424 aa15.45■□□□□ 0.06
TRAK1-201ENST00000327628 BAG3O95817 575 aa15.45■□□□□ 0.06
TRAK1-201ENST00000327628 SOS1Q07889 1333 aaPredicted RBP15.45■□□□□ 0.06
TRAK1-201ENST00000327628 EHBP1Q8NDI1 1231 aa15.45■□□□□ 0.06
TRAK1-201ENST00000327628 SLC12A7Q9Y666 1083 aa15.45■□□□□ 0.06
TRAK1-201ENST00000327628 YEATS4O95619 227 aa15.45■□□□□ 0.06
TRAK1-201ENST00000327628 FILIP1Q7Z7B0 1213 aa15.45■□□□□ 0.06
TRAK1-201ENST00000327628 ZGPATQ8N5A5 531 aaKnown RBP15.45■□□□□ 0.06
TRAK1-201ENST00000327628 UBXN4Q92575 508 aa15.45■□□□□ 0.06
TRAK1-201ENST00000327628 TUBB4AP04350 444 aa15.45■□□□□ 0.06
TRAK1-201ENST00000327628 IFI16Q16666 785 aaKnown RBP15.45■□□□□ 0.06
TRAK1-201ENST00000327628 ZNF213O14771 459 aa15.45■□□□□ 0.06
TRAK1-201ENST00000327628 ZFYP08048 801 aaPredicted RBP15.45■□□□□ 0.06
TRAK1-201ENST00000327628 PPP1R42Q7Z4L9 355 aa15.45■□□□□ 0.06
TRAK1-201ENST00000327628 ARHGAP45Q92619 1136 aa15.45■□□□□ 0.06
TRAK1-201ENST00000327628 PUS7Q96PZ0 661 aaKnown RBP15.45■□□□□ 0.06
TRAK1-201ENST00000327628 LIMCH1Q9UPQ0 1083 aa15.45■□□□□ 0.06
TRAK1-201ENST00000327628 WASLO00401 505 aaPredicted RBP15.44■□□□□ 0.06
TRAK1-201ENST00000327628 USP37Q86T82 979 aa15.44■□□□□ 0.06
TRAK1-201ENST00000327628 CRACR2AQ9BSW2 395 aa15.44■□□□□ 0.06
TRAK1-201ENST00000327628 SEPT11Q9NVA2 429 aaKnown RBP15.44■□□□□ 0.06
TRAK1-201ENST00000327628 UVSSAQ2YD98 709 aa15.44■□□□□ 0.06
TRAK1-201ENST00000327628 CFAP100Q494V2 611 aa15.44■□□□□ 0.06
TRAK1-201ENST00000327628 TMEM57Q8N5G2 664 aa15.44■□□□□ 0.06
TRAK1-201ENST00000327628 PLB1Q6P1J6 1458 aa15.44■□□□□ 0.06
TRAK1-201ENST00000327628 CCDC194A0A1B0GVG4 234 aa15.44■□□□□ 0.06
TRAK1-201ENST00000327628 RPGRQ92834 1020 aaKnown RBP15.44■□□□□ 0.06
TRAK1-201ENST00000327628 MICALCLQ6ZW33 695 aa15.44■□□□□ 0.06
TRAK1-201ENST00000327628 CALML4Q96GE6 196 aa15.44■□□□□ 0.06
TRAK1-201ENST00000327628 RMND1Q9NWS8 449 aa15.44■□□□□ 0.06
TRAK1-201ENST00000327628 TEX14Q8IWB6 1497 aa15.43■□□□□ 0.06
TRAK1-201ENST00000327628 PDE4BQ07343 736 aa15.43■□□□□ 0.06
TRAK1-201ENST00000327628 HOOK3Q86VS8 718 aa15.43■□□□□ 0.06
TRAK1-201ENST00000327628 ALS2CR12Q96Q35 445 aa15.43■□□□□ 0.06
TRAK1-201ENST00000327628 RBM27Q9P2N5 1060 aaKnown RBP15.43■□□□□ 0.06
TRAK1-201ENST00000327628 TMTC2Q8N394 836 aa15.43■□□□□ 0.06
TRAK1-201ENST00000327628 SPC24Q8NBT2 197 aa15.43■□□□□ 0.06
TRAK1-201ENST00000327628 ANKRD62A6NC57 917 aa15.43■□□□□ 0.06
TRAK1-201ENST00000327628 GRIN2AQ12879 1464 aa15.43■□□□□ 0.06
TRAK1-201ENST00000327628 SHTN1A0MZ66 631 aa15.43■□□□□ 0.06
TRAK1-201ENST00000327628 PAFAH1B1P43034 410 aa15.43■□□□□ 0.06
TRAK1-201ENST00000327628 HLA-DOAP06340 250 aa15.42■□□□□ 0.06
TRAK1-201ENST00000327628 CACNA2D4Q7Z3S7 1137 aa15.42■□□□□ 0.06
TRAK1-201ENST00000327628 ZSCAN30Q86W11 494 aa15.42■□□□□ 0.06
TRAK1-201ENST00000327628 IFNL2Q8IZJ0 200 aa15.42■□□□□ 0.06
TRAK1-201ENST00000327628 TMCO3Q6UWJ1 677 aa15.42■□□□□ 0.06
TRAK1-201ENST00000327628 LRRC45Q96CN5 670 aa15.42■□□□□ 0.06
TRAK1-201ENST00000327628 PCF11O94913 1555 aaKnown RBP15.42■□□□□ 0.06
TRAK1-201ENST00000327628 KIF18AQ8NI77 898 aa15.42■□□□□ 0.06
TRAK1-201ENST00000327628 NUTM2BA6NNL0 878 aaPredicted RBP15.41■□□□□ 0.06
TRAK1-201ENST00000327628 NUTM2EB1AL46 878 aaPredicted RBP15.41■□□□□ 0.06
TRAK1-201ENST00000327628 RARSP54136 660 aaKnown RBP15.41■□□□□ 0.06
TRAK1-201ENST00000327628 NUTM2AQ8IVF1 878 aaPredicted RBP15.41■□□□□ 0.06
TRAK1-201ENST00000327628 ZSCAN16Q9H4T2 348 aaPredicted RBP15.41■□□□□ 0.06
TRAK1-201ENST00000327628 TCP11L1Q9NUJ3 509 aa15.41■□□□□ 0.06
TRAK1-201ENST00000327628 ARHGEF11O15085 1522 aa15.41■□□□□ 0.06
TRAK1-201ENST00000327628 RRS1Q15050 365 aaKnown RBP15.41■□□□□ 0.06
TRAK1-201ENST00000327628 ABCC5O15440 1437 aa15.41■□□□□ 0.06
TRAK1-201ENST00000327628 GOLGA8AA7E2F4 631 aa15.41■□□□□ 0.06
TRAK1-201ENST00000327628 GOLGA8BA8MQT2 603 aa15.41■□□□□ 0.06
TRAK1-201ENST00000327628 TOP1P11387 765 aaKnown RBP15.41■□□□□ 0.06
TRAK1-201ENST00000327628 SMC1AQ14683 1233 aaKnown RBP15.41■□□□□ 0.06
TRAK1-201ENST00000327628 MYD88Q99836 296 aa15.41■□□□□ 0.06
TRAK1-201ENST00000327628 ECHDC1Q9NTX5 307 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms