RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 FHDC1Q9C0D6 1143 aaPredicted RBP6.56□□□□□ -1.36
SMCO3-201ENST00000316048 ZNF395Q9H8N7 513 aaPredicted RBP6.56□□□□□ -1.36
SMCO3-201ENST00000316048 J3QL48 77 aa6.55□□□□□ -1.36
SMCO3-201ENST00000316048 RELBQ01201 579 aa6.55□□□□□ -1.36
SMCO3-201ENST00000316048 ZSCAN29Q8IWY8 852 aaPredicted RBP6.55□□□□□ -1.36
SMCO3-201ENST00000316048 KLF16Q9BXK1 252 aaPredicted RBP6.55□□□□□ -1.36
SMCO3-201ENST00000316048 RNF19AQ9NV58 838 aa6.55□□□□□ -1.36
SMCO3-201ENST00000316048 MEN1O00255 615 aa6.55□□□□□ -1.36
SMCO3-201ENST00000316048 ZIC2O95409 532 aaPredicted RBP6.55□□□□□ -1.36
SMCO3-201ENST00000316048 CENPCQ03188 943 aa6.55□□□□□ -1.36
SMCO3-201ENST00000316048 CLN3Q13286 438 aa6.55□□□□□ -1.36
SMCO3-201ENST00000316048 STIM2Q9P246 746 aa6.55□□□□□ -1.36
SMCO3-201ENST00000316048 HCN4Q9Y3Q4 1203 aa6.55□□□□□ -1.36
SMCO3-201ENST00000316048 WASF2Q9Y6W5 498 aa6.55□□□□□ -1.36
SMCO3-201ENST00000316048 GPR182O15218 404 aa6.54□□□□□ -1.36
SMCO3-201ENST00000316048 IGHA2P01877 340 aa6.54□□□□□ -1.36
SMCO3-201ENST00000316048 AAMPQ13685 434 aa6.54□□□□□ -1.36
SMCO3-201ENST00000316048 POTEAQ6S8J7 498 aa6.54□□□□□ -1.36
SMCO3-201ENST00000316048 STAG2Q8N3U4 1231 aa6.54□□□□□ -1.36
SMCO3-201ENST00000316048 RBCK1Q9BYM8 510 aa6.54□□□□□ -1.36
SMCO3-201ENST00000316048 KLK14Q9P0G3 267 aa6.54□□□□□ -1.36
SMCO3-201ENST00000316048 CDK2AP1O14519 115 aa6.53□□□□□ -1.36
SMCO3-201ENST00000316048 RECKO95980 971 aa6.53□□□□□ -1.36
SMCO3-201ENST00000316048 Q6ZVU0 165 aa6.53□□□□□ -1.36
SMCO3-201ENST00000316048 ETFBKMTQ8IXQ9 262 aa6.53□□□□□ -1.36
SMCO3-201ENST00000316048 ALDH16A1Q8IZ83 802 aa6.53□□□□□ -1.36
SMCO3-201ENST00000316048 KLRG1Q96E93 195 aa6.53□□□□□ -1.36
SMCO3-201ENST00000316048 SETDB2Q96T68 719 aa6.53□□□□□ -1.36
SMCO3-201ENST00000316048 CABP1Q9NZU7 370 aa6.53□□□□□ -1.36
SMCO3-201ENST00000316048 ZNF232Q9UNY5 417 aa6.53□□□□□ -1.36
SMCO3-201ENST00000316048 SERTM1A2A2V5 107 aa6.53□□□□□ -1.36
SMCO3-201ENST00000316048 TNFRSF10AO00220 468 aa6.53□□□□□ -1.36
SMCO3-201ENST00000316048 NDUFB5O43674 189 aa6.53□□□□□ -1.36
SMCO3-201ENST00000316048 NOS2P35228 1153 aa6.53□□□□□ -1.36
SMCO3-201ENST00000316048 WDR4P57081 412 aaKnown RBP6.53□□□□□ -1.36
SMCO3-201ENST00000316048 DGKZQ13574 1117 aa6.53□□□□□ -1.36
SMCO3-201ENST00000316048 EAPPQ56P03 285 aaPredicted RBP6.53□□□□□ -1.36
SMCO3-201ENST00000316048 ZNF326Q5BKZ1 582 aaKnown RBP6.53□□□□□ -1.36
SMCO3-201ENST00000316048 L3MBTL2Q969R5 705 aa6.53□□□□□ -1.36
SMCO3-201ENST00000316048 BRPF3Q9ULD4 1205 aa6.53□□□□□ -1.36
SMCO3-201ENST00000316048 TREHO43280 583 aa6.52□□□□□ -1.37
SMCO3-201ENST00000316048 TIMP2P16035 220 aa6.52□□□□□ -1.37
SMCO3-201ENST00000316048 PTGIRP43119 386 aa6.52□□□□□ -1.37
SMCO3-201ENST00000316048 ZNF598Q86UK7 904 aaKnown RBP6.52□□□□□ -1.37
SMCO3-201ENST00000316048 TMC1Q8TDI8 760 aa6.52□□□□□ -1.37
SMCO3-201ENST00000316048 MYO19Q96H55 970 aa6.52□□□□□ -1.37
SMCO3-201ENST00000316048 FAM161BQ96MY7 647 aa6.52□□□□□ -1.37
SMCO3-201ENST00000316048 FMR1Q06787 632 aaKnown RBP eCLIP6.52□□□□□ -1.37
SMCO3-201ENST00000316048 TEAD4Q15561 434 aa6.52□□□□□ -1.37
SMCO3-201ENST00000316048 LOC105371045A0A1W2PR82 267 aa6.51□□□□□ -1.37
SMCO3-201ENST00000316048 TXLNAP40222 546 aa6.51□□□□□ -1.37
SMCO3-201ENST00000316048 MAPK8P45983 427 aa6.51□□□□□ -1.37
SMCO3-201ENST00000316048 DSC3Q14574 896 aa6.51□□□□□ -1.37
SMCO3-201ENST00000316048 PHACTR1Q9C0D0 580 aa6.51□□□□□ -1.37
SMCO3-201ENST00000316048 WWC3Q9ULE0 1092 aa6.51□□□□□ -1.37
SMCO3-201ENST00000316048 POLIQ9UNA4 740 aa6.51□□□□□ -1.37
SMCO3-201ENST00000316048 TCF3P15923 654 aa6.5□□□□□ -1.37
SMCO3-201ENST00000316048 HIRAP54198 1017 aaPredicted RBP6.5□□□□□ -1.37
SMCO3-201ENST00000316048 SNIP1Q8TAD8 396 aaKnown RBP6.5□□□□□ -1.37
SMCO3-201ENST00000316048 CHMP3Q9Y3E7 222 aa6.5□□□□□ -1.37
SMCO3-201ENST00000316048 TSNAXIP1Q2TAA8 658 aa6.5□□□□□ -1.37
SMCO3-201ENST00000316048 PPARGC1BQ86YN6 1023 aaKnown RBP6.5□□□□□ -1.37
SMCO3-201ENST00000316048 ZSCAN10Q96SZ4 725 aaPredicted RBP6.5□□□□□ -1.37
SMCO3-201ENST00000316048 FAM129BQ96TA1 746 aa6.5□□□□□ -1.37
SMCO3-201ENST00000316048 PRKD2Q9BZL6 878 aa6.5□□□□□ -1.37
SMCO3-201ENST00000316048 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.5□□□□□ -1.37
SMCO3-201ENST00000316048 BCS1LQ9Y276 419 aa6.5□□□□□ -1.37
SMCO3-201ENST00000316048 DNM1Q05193 864 aaKnown RBP6.49□□□□□ -1.37
SMCO3-201ENST00000316048 EHHADHQ08426 723 aa6.49□□□□□ -1.37
SMCO3-201ENST00000316048 TRIM52Q96A61 297 aa6.49□□□□□ -1.37
SMCO3-201ENST00000316048 NLRP3Q96P20 1036 aa6.49□□□□□ -1.37
SMCO3-201ENST00000316048 TTC24A2A3L6 582 aaPredicted RBP6.49□□□□□ -1.37
SMCO3-201ENST00000316048 A6NHS1 94 aa6.49□□□□□ -1.37
SMCO3-201ENST00000316048 GDF9O60383 454 aa6.49□□□□□ -1.37
SMCO3-201ENST00000316048 SMPD1P17405 629 aa6.49□□□□□ -1.37
SMCO3-201ENST00000316048 BRD2P25440 801 aaKnown RBP6.49□□□□□ -1.37
SMCO3-201ENST00000316048 RTN1Q16799 776 aa6.49□□□□□ -1.37
SMCO3-201ENST00000316048 NBPF15Q8N660 670 aa6.49□□□□□ -1.37
SMCO3-201ENST00000316048 EDEM1Q92611 657 aa6.49□□□□□ -1.37
SMCO3-201ENST00000316048 INSM2Q96T92 566 aaPredicted RBP6.49□□□□□ -1.37
SMCO3-201ENST00000316048 ZAP70P43403 619 aa6.48□□□□□ -1.37
SMCO3-201ENST00000316048 PLA2G4AP47712 749 aa6.48□□□□□ -1.37
SMCO3-201ENST00000316048 MMRN1Q13201 1228 aa6.48□□□□□ -1.37
SMCO3-201ENST00000316048 TMEM214Q6NUQ4 689 aaKnown RBP6.48□□□□□ -1.37
SMCO3-201ENST00000316048 TRIM67Q6ZTA4 783 aa6.48□□□□□ -1.37
SMCO3-201ENST00000316048 ABTB2Q8N961 1025 aa6.48□□□□□ -1.37
SMCO3-201ENST00000316048 HPS1Q92902 700 aa6.48□□□□□ -1.37
SMCO3-201ENST00000316048 NIF3L1Q9GZT8 377 aa6.48□□□□□ -1.37
SMCO3-201ENST00000316048 COL19A1Q14993 1142 aa6.47□□□□□ -1.37
SMCO3-201ENST00000316048 ALKBH2Q6NS38 261 aa6.47□□□□□ -1.37
SMCO3-201ENST00000316048 GJD3Q8N144 294 aa6.47□□□□□ -1.37
SMCO3-201ENST00000316048 MEIOBQ8N635 442 aa6.47□□□□□ -1.37
SMCO3-201ENST00000316048 IFT43Q96FT9 208 aa6.47□□□□□ -1.37
SMCO3-201ENST00000316048 PDGFAP04085 211 aa6.47□□□□□ -1.37
SMCO3-201ENST00000316048 LDHBP07195 334 aaKnown RBP6.47□□□□□ -1.37
SMCO3-201ENST00000316048 VAMP1P23763 118 aa6.47□□□□□ -1.37
SMCO3-201ENST00000316048 PHKA2P46019 1235 aa6.47□□□□□ -1.37
SMCO3-201ENST00000316048 MRPL58Q14197 206 aaKnown RBP6.47□□□□□ -1.37
SMCO3-201ENST00000316048 C11orf91Q3C1V1 193 aa6.47□□□□□ -1.37
SMCO3-201ENST00000316048 C4orf17Q53FE4 359 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms