RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 MAP3K1Q13233 1512 aa16.23■□□□□ 0.19
PRKCB-201ENST00000303531 CCDC82Q8N4S0 544 aa16.23■□□□□ 0.19
PRKCB-201ENST00000303531 HYPKQ9NX55 129 aa16.23■□□□□ 0.19
PRKCB-201ENST00000303531 ZNF213O14771 459 aa16.23■□□□□ 0.19
PRKCB-201ENST00000303531 TMCO3Q6UWJ1 677 aa16.23■□□□□ 0.19
PRKCB-201ENST00000303531 CUL7Q14999 1698 aa16.23■□□□□ 0.19
PRKCB-201ENST00000303531 ERICH4A6NGS2 130 aa16.23■□□□□ 0.19
PRKCB-201ENST00000303531 CAVIN4Q5BKX8 364 aa16.23■□□□□ 0.19
PRKCB-201ENST00000303531 EVI5LQ96CN4 794 aa16.22■□□□□ 0.19
PRKCB-201ENST00000303531 SEC63Q9UGP8 760 aaKnown RBP16.22■□□□□ 0.19
PRKCB-201ENST00000303531 TOP1P11387 765 aaKnown RBP16.22■□□□□ 0.19
PRKCB-201ENST00000303531 CCT2P78371 535 aaKnown RBP16.22■□□□□ 0.19
PRKCB-201ENST00000303531 PAF1Q8N7H5 531 aa16.22■□□□□ 0.19
PRKCB-201ENST00000303531 KIF18AQ8NI77 898 aa16.22■□□□□ 0.19
PRKCB-201ENST00000303531 ANKRD62A6NC57 917 aa16.22■□□□□ 0.19
PRKCB-201ENST00000303531 GJB2P29033 226 aa16.22■□□□□ 0.19
PRKCB-201ENST00000303531 MBIPQ9NS73 344 aa16.22■□□□□ 0.19
PRKCB-201ENST00000303531 NSD2O96028 1365 aa16.22■□□□□ 0.19
PRKCB-201ENST00000303531 SLC12A7Q9Y666 1083 aa16.22■□□□□ 0.19
PRKCB-201ENST00000303531 MAP3K12Q12852 859 aa16.22■□□□□ 0.19
PRKCB-201ENST00000303531 ADGRL1O94910 1474 aa16.21■□□□□ 0.19
PRKCB-201ENST00000303531 GOLGA8BA8MQT2 603 aa16.21■□□□□ 0.19
PRKCB-201ENST00000303531 MPHOSPH10O00566 681 aaKnown RBP16.21■□□□□ 0.19
PRKCB-201ENST00000303531 CTAGE5O15320 804 aa16.21■□□□□ 0.19
PRKCB-201ENST00000303531 TBC1D32Q96NH3 1257 aa16.21■□□□□ 0.19
PRKCB-201ENST00000303531 ECHDC1Q9NTX5 307 aa16.21■□□□□ 0.19
PRKCB-201ENST00000303531 MKNK2Q9HBH9 465 aa16.21■□□□□ 0.19
PRKCB-201ENST00000303531 ZNF287Q9HBT7 754 aa16.21■□□□□ 0.19
PRKCB-201ENST00000303531 TSHZ3Q63HK5 1081 aa16.21■□□□□ 0.19
PRKCB-201ENST00000303531 NOS1P29475 1434 aa16.21■□□□□ 0.19
PRKCB-201ENST00000303531 STX6O43752 255 aa16.21■□□□□ 0.18
PRKCB-201ENST00000303531 POLR3DP05423 398 aaPredicted RBP16.21■□□□□ 0.18
PRKCB-201ENST00000303531 A0A087WZG4 1122 aa16.2■□□□□ 0.18
PRKCB-201ENST00000303531 SPA17Q15506 151 aa16.2■□□□□ 0.18
PRKCB-201ENST00000303531 CTCFLQ8NI51 663 aaPredicted RBP16.2■□□□□ 0.18
PRKCB-201ENST00000303531 ZNF652Q9Y2D9 606 aa16.2■□□□□ 0.18
PRKCB-201ENST00000303531 TTC22Q5TAA0 569 aa16.2■□□□□ 0.18
PRKCB-201ENST00000303531 FAM83GA6ND36 823 aa16.2■□□□□ 0.18
PRKCB-201ENST00000303531 URI1O94763 535 aaPredicted RBP16.2■□□□□ 0.18
PRKCB-201ENST00000303531 FSIP1Q8NA03 581 aa16.2■□□□□ 0.18
PRKCB-201ENST00000303531 GOLGA6L7A0A1B0GV03 622 aa16.2■□□□□ 0.18
PRKCB-201ENST00000303531 DDX19AQ9NUU7 478 aaKnown RBP16.2■□□□□ 0.18
PRKCB-201ENST00000303531 KIF5CO60282 957 aa16.2■□□□□ 0.18
PRKCB-201ENST00000303531 CASQ1P31415 396 aa16.2■□□□□ 0.18
PRKCB-201ENST00000303531 ZRSR2Q15696 482 aaKnown RBP16.2■□□□□ 0.18
PRKCB-201ENST00000303531 CD109Q6YHK3 1445 aa16.2■□□□□ 0.18
PRKCB-201ENST00000303531 TFIP11Q9UBB9 837 aaKnown RBP16.2■□□□□ 0.18
PRKCB-201ENST00000303531 MAP3K2Q9Y2U5 619 aa16.2■□□□□ 0.18
PRKCB-201ENST00000303531 RANBP6O60518 1105 aaKnown RBP16.2■□□□□ 0.18
PRKCB-201ENST00000303531 BAG4O95429 457 aaKnown RBP16.2■□□□□ 0.18
PRKCB-201ENST00000303531 AEBP2Q6ZN18 517 aaPredicted RBP16.19■□□□□ 0.18
PRKCB-201ENST00000303531 PKNOX2Q96KN3 472 aa16.19■□□□□ 0.18
PRKCB-201ENST00000303531 PLCD4Q9BRC7 762 aa16.19■□□□□ 0.18
PRKCB-201ENST00000303531 CALRP27797 417 aaKnown RBP16.19■□□□□ 0.18
PRKCB-201ENST00000303531 ANKRD18AQ8IVF6 992 aa16.19■□□□□ 0.18
PRKCB-201ENST00000303531 CNNM3Q8NE01 707 aa16.19■□□□□ 0.18
PRKCB-201ENST00000303531 PHAXQ9H814 394 aaKnown RBP16.19■□□□□ 0.18
PRKCB-201ENST00000303531 GOLGA8AA7E2F4 631 aa16.19■□□□□ 0.18
PRKCB-201ENST00000303531 SSRP1Q08945 709 aaKnown RBP16.19■□□□□ 0.18
PRKCB-201ENST00000303531 FKBP15Q5T1M5 1219 aa16.19■□□□□ 0.18
PRKCB-201ENST00000303531 JAKMIP3Q5VZ66 844 aa16.19■□□□□ 0.18
PRKCB-201ENST00000303531 GBP3Q9H0R5 595 aa16.19■□□□□ 0.18
PRKCB-201ENST00000303531 PHF8Q9UPP1 1060 aa16.19■□□□□ 0.18
PRKCB-201ENST00000303531 DHX29Q7Z478 1369 aaKnown RBP16.19■□□□□ 0.18
PRKCB-201ENST00000303531 HSP90AB3PQ58FF7 597 aa16.19■□□□□ 0.18
PRKCB-201ENST00000303531 CRACR2AQ9BSW2 395 aa16.19■□□□□ 0.18
PRKCB-201ENST00000303531 TRMT112Q9UI30 125 aaKnown RBP16.19■□□□□ 0.18
PRKCB-201ENST00000303531 IDI1Q13907 227 aa16.18■□□□□ 0.18
PRKCB-201ENST00000303531 IFIT3O14879 490 aaKnown RBP16.18■□□□□ 0.18
PRKCB-201ENST00000303531 SLC5A1P13866 664 aa16.18■□□□□ 0.18
PRKCB-201ENST00000303531 MATR3P43243 847 aaKnown RBP eCLIP16.18■□□□□ 0.182e-6■■■■□ 22.2
PRKCB-201ENST00000303531 TTC21BQ7Z4L5 1316 aa16.18■□□□□ 0.18
PRKCB-201ENST00000303531 FBXO31Q5XUX0 539 aaPredicted RBP16.18■□□□□ 0.18
PRKCB-201ENST00000303531 IQCA1Q86XH1 822 aa16.18■□□□□ 0.18
PRKCB-201ENST00000303531 KIF4BQ2VIQ3 1234 aa16.18■□□□□ 0.18
PRKCB-201ENST00000303531 TRMT1Q9NXH9 659 aaKnown RBP16.18■□□□□ 0.18
PRKCB-201ENST00000303531 RBM27Q9P2N5 1060 aaKnown RBP16.18■□□□□ 0.18
PRKCB-201ENST00000303531 AMOTL2Q9Y2J4 779 aa16.18■□□□□ 0.18
PRKCB-201ENST00000303531 TNNT1P13805 278 aa16.18■□□□□ 0.18
PRKCB-201ENST00000303531 TAF3Q5VWG9 929 aa16.18■□□□□ 0.18
PRKCB-201ENST00000303531 GOLIM4O00461 696 aa16.17■□□□□ 0.18
PRKCB-201ENST00000303531 PPP1R12BO60237 982 aaPredicted RBP16.17■□□□□ 0.18
PRKCB-201ENST00000303531 PPP1R42Q7Z4L9 355 aa16.17■□□□□ 0.18
PRKCB-201ENST00000303531 DZIP1Q86YF9 867 aaKnown RBP16.17■□□□□ 0.18
PRKCB-201ENST00000303531 C16orf45Q96MC5 204 aaPredicted RBP16.17■□□□□ 0.18
PRKCB-201ENST00000303531 IL16Q14005 1332 aa16.17■□□□□ 0.18
PRKCB-201ENST00000303531 ANKRD18BA2A2Z9 1011 aa16.17■□□□□ 0.18
PRKCB-201ENST00000303531 KRI1Q8N9T8 703 aaKnown RBP16.17■□□□□ 0.18
PRKCB-201ENST00000303531 ADCY5O95622 1261 aa16.17■□□□□ 0.18
PRKCB-201ENST00000303531 BIN1O00499 593 aa16.16■□□□□ 0.18
PRKCB-201ENST00000303531 FOXO3O43524 673 aa16.16■□□□□ 0.18
PRKCB-201ENST00000303531 SSR1P43307 286 aaKnown RBP16.16■□□□□ 0.18
PRKCB-201ENST00000303531 CBX1P83916 185 aa16.16■□□□□ 0.18
PRKCB-201ENST00000303531 CACNA2D4Q7Z3S7 1137 aa16.16■□□□□ 0.18
PRKCB-201ENST00000303531 TSG101Q99816 390 aa16.16■□□□□ 0.18
PRKCB-201ENST00000303531 RNF41Q9H4P4 317 aaPredicted RBP16.16■□□□□ 0.18
PRKCB-201ENST00000303531 CPLX3Q8WVH0 158 aa16.16■□□□□ 0.18
PRKCB-201ENST00000303531 NUCB1Q02818 461 aa16.16■□□□□ 0.18
PRKCB-201ENST00000303531 ZBTB3Q9H5J0 574 aa16.16■□□□□ 0.18
PRKCB-201ENST00000303531 STX1AQ16623 288 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms