RNA–Protein interactions for RNA: ENST00000299752.8

CDH16-201, Transcript of cadherin 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH16, Length 2,954 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-201ENST00000299752 FMNL2Q96PY5 1086 aa17.75■□□□□ 0.43
CDH16-201ENST00000299752 DBF4Q9UBU7 674 aaPredicted RBP17.75■□□□□ 0.43
CDH16-201ENST00000299752 C5P01031 1676 aa17.74■□□□□ 0.43
CDH16-201ENST00000299752 ANKRD45Q5TZF3 282 aa17.74■□□□□ 0.43
CDH16-201ENST00000299752 MEX3CQ5U5Q3 659 aaKnown RBP17.74■□□□□ 0.43
CDH16-201ENST00000299752 CHD1LQ86WJ1 897 aa17.74■□□□□ 0.43
CDH16-201ENST00000299752 HEG1Q9ULI3 1381 aa17.74■□□□□ 0.43
CDH16-201ENST00000299752 PIGBQ92521 554 aa17.73■□□□□ 0.43
CDH16-201ENST00000299752 ERVV-2B6SEH9 535 aa17.73■□□□□ 0.43
CDH16-201ENST00000299752 NKX1-1Q15270 411 aaPredicted RBP17.73■□□□□ 0.43
CDH16-201ENST00000299752 DDB1Q16531 1140 aa17.73■□□□□ 0.43
CDH16-201ENST00000299752 DISP2A7MBM2 1401 aa17.73■□□□□ 0.43
CDH16-201ENST00000299752 APBB1O00213 710 aa17.73■□□□□ 0.43
CDH16-201ENST00000299752 SNRPA1P09661 255 aaKnown RBP17.73■□□□□ 0.43
CDH16-201ENST00000299752 PDIA6Q15084 440 aa17.72■□□□□ 0.43
CDH16-201ENST00000299752 CEP85Q6P2H3 762 aa17.72■□□□□ 0.43
CDH16-201ENST00000299752 ANKRD44Q8N8A2 993 aa17.72■□□□□ 0.43
CDH16-201ENST00000299752 IPO9Q96P70 1041 aaKnown RBP17.72■□□□□ 0.43
CDH16-201ENST00000299752 RBM42Q9BTD8 480 aaKnown RBP17.72■□□□□ 0.43
CDH16-201ENST00000299752 ZNF330Q9Y3S2 320 aaPredicted RBP17.72■□□□□ 0.43
CDH16-201ENST00000299752 LRP6O75581 1613 aa17.72■□□□□ 0.43
CDH16-201ENST00000299752 ATP10DQ9P241 1426 aa17.72■□□□□ 0.43
CDH16-201ENST00000299752 UNC5CLQ8IV45 518 aa17.72■□□□□ 0.43
CDH16-201ENST00000299752 CHMP4AQ9BY43 222 aa17.72■□□□□ 0.43
CDH16-201ENST00000299752 TOGARAM1Q9Y4F4 1720 aa17.72■□□□□ 0.43
CDH16-201ENST00000299752 SPATA31A5Q5VU36 1347 aa17.72■□□□□ 0.43
CDH16-201ENST00000299752 SPATA31A7Q8IWB4 1347 aa17.72■□□□□ 0.43
CDH16-201ENST00000299752 PRIM1P49642 420 aaKnown RBP17.71■□□□□ 0.43
CDH16-201ENST00000299752 FAM182BQ5T319 152 aa17.71■□□□□ 0.43
CDH16-201ENST00000299752 RPAP2Q8IXW5 612 aaPredicted RBP17.71■□□□□ 0.43
CDH16-201ENST00000299752 MAP3K2Q9Y2U5 619 aa17.71■□□□□ 0.43
CDH16-201ENST00000299752 MRC1P22897 1456 aa17.71■□□□□ 0.43
CDH16-201ENST00000299752 NRAPQ86VF7 1730 aa17.71■□□□□ 0.43
CDH16-201ENST00000299752 SLIT2O94813 1529 aa17.7■□□□□ 0.42
CDH16-201ENST00000299752 A1BGP04217 495 aa17.7■□□□□ 0.42
CDH16-201ENST00000299752 XAGE3Q8WTP9 111 aa17.7■□□□□ 0.42
CDH16-201ENST00000299752 USP21Q9UK80 565 aa17.7■□□□□ 0.42
CDH16-201ENST00000299752 DNAAF4Q8WXU2 420 aa17.7■□□□□ 0.42
CDH16-201ENST00000299752 ADCY9O60503 1353 aa17.69■□□□□ 0.42
CDH16-201ENST00000299752 SEC24BO95487 1268 aa17.69■□□□□ 0.42
CDH16-201ENST00000299752 CWF19L2Q2TBE0 894 aaKnown RBP17.69■□□□□ 0.42
CDH16-201ENST00000299752 COPS6Q7L5N1 327 aa17.69■□□□□ 0.42
CDH16-201ENST00000299752 MARCH10Q8NA82 808 aaPredicted RBP17.69■□□□□ 0.42
CDH16-201ENST00000299752 DCTPP1Q9H773 170 aa17.69■□□□□ 0.42
CDH16-201ENST00000299752 DDX21Q9NR30 783 aaKnown RBP eCLIP17.69■□□□□ 0.42
CDH16-201ENST00000299752 PLEKHG2Q9H7P9 1386 aa17.69■□□□□ 0.42
CDH16-201ENST00000299752 BCL9LQ86UU0 1499 aa17.68■□□□□ 0.42
CDH16-201ENST00000299752 GNAI2P04899 355 aa17.67■□□□□ 0.42
CDH16-201ENST00000299752 SRCIN1Q9C0H9 1055 aa17.67■□□□□ 0.42
CDH16-201ENST00000299752 ARXQ96QS3 562 aa17.67■□□□□ 0.42
CDH16-201ENST00000299752 ATG3Q9NT62 314 aa17.67■□□□□ 0.42
CDH16-201ENST00000299752 HYPKQ9NX55 129 aa17.67■□□□□ 0.42
CDH16-201ENST00000299752 RIC3Q7Z5B4 369 aa17.67■□□□□ 0.42
CDH16-201ENST00000299752 JARID2Q92833 1246 aaPredicted RBP17.67■□□□□ 0.42
CDH16-201ENST00000299752 USP44Q9H0E7 712 aa17.67■□□□□ 0.42
CDH16-201ENST00000299752 LRRFIP2Q9Y608 721 aaKnown RBP17.67■□□□□ 0.42
CDH16-201ENST00000299752 GNAI3P08754 354 aa17.66■□□□□ 0.42
CDH16-201ENST00000299752 NBPF7P0C2Y1 421 aaPredicted RBP17.66■□□□□ 0.42
CDH16-201ENST00000299752 EP400Q96L91 3159 aa17.66■□□□□ 0.42
CDH16-201ENST00000299752 NBPF26B4DH59 902 aa17.66■□□□□ 0.42
CDH16-201ENST00000299752 NBPF14Q5TI25 921 aa17.66■□□□□ 0.42
CDH16-201ENST00000299752 NBPF10Q6P3W6 841 aaKnown RBP17.66■□□□□ 0.42
CDH16-201ENST00000299752 NBPF15Q8N660 670 aa17.66■□□□□ 0.42
CDH16-201ENST00000299752 KCNQ2O43526 872 aa17.65■□□□□ 0.42
CDH16-201ENST00000299752 BEND3Q5T5X7 828 aa17.65■□□□□ 0.42
CDH16-201ENST00000299752 DNAJC10Q8IXB1 793 aa17.65■□□□□ 0.42
CDH16-201ENST00000299752 PXDNLA1KZ92 1463 aa17.65■□□□□ 0.42
CDH16-201ENST00000299752 TNS2Q63HR2 1409 aa17.65■□□□□ 0.42
CDH16-201ENST00000299752 ITGB4P16144 1822 aa17.65■□□□□ 0.42
CDH16-201ENST00000299752 KSR2Q6VAB6 950 aa17.64■□□□□ 0.42
CDH16-201ENST00000299752 THRAP3Q9Y2W1 955 aaKnown RBP17.64■□□□□ 0.41
CDH16-201ENST00000299752 HMMRO75330 724 aa17.64■□□□□ 0.41
CDH16-201ENST00000299752 UBTFL1P0CB47 393 aaPredicted RBP17.64■□□□□ 0.41
CDH16-201ENST00000299752 ERICH6Q7L0X2 663 aa17.64■□□□□ 0.41
CDH16-201ENST00000299752 ZBTB47Q9UFB7 747 aaPredicted RBP17.64■□□□□ 0.41
CDH16-201ENST00000299752 NOP58Q9Y2X3 529 aaKnown RBP17.64■□□□□ 0.41
CDH16-201ENST00000299752 KCPQ6ZWJ8 1503 aa17.63■□□□□ 0.41
CDH16-201ENST00000299752 AFF2P51816 1311 aa17.63■□□□□ 0.41
CDH16-201ENST00000299752 SPATA31A6Q5VVP1 1343 aa17.63■□□□□ 0.41
CDH16-201ENST00000299752 PNMA6EA0A0J9YXQ4 647 aa17.63■□□□□ 0.41
CDH16-201ENST00000299752 ATP5J2-PTCD1G3V325 749 aa17.63■□□□□ 0.41
CDH16-201ENST00000299752 TTLL7Q6ZT98 887 aa17.63■□□□□ 0.41
CDH16-201ENST00000299752 MYD88Q99836 296 aa17.63■□□□□ 0.41
CDH16-201ENST00000299752 WNK3Q9BYP7 1800 aa17.63■□□□□ 0.41
CDH16-201ENST00000299752 GLI3P10071 1580 aa17.62■□□□□ 0.41
CDH16-201ENST00000299752 SMARCA5O60264 1052 aaPredicted RBP17.62■□□□□ 0.41
CDH16-201ENST00000299752 VPS72Q15906 364 aa17.62■□□□□ 0.41
CDH16-201ENST00000299752 PTF1AQ7RTS3 328 aa17.62■□□□□ 0.41
CDH16-201ENST00000299752 FNBP4Q8N3X1 1017 aaPredicted RBP17.62■□□□□ 0.41
CDH16-201ENST00000299752 SLC4A9Q96Q91 983 aa17.62■□□□□ 0.41
CDH16-201ENST00000299752 NWD2Q9ULI1 1742 aa17.62■□□□□ 0.41
CDH16-201ENST00000299752 N4BP2Q86UW6 1770 aaPredicted RBP17.62■□□□□ 0.41
CDH16-201ENST00000299752 RTL5Q5HYW3 569 aaPredicted RBP17.61■□□□□ 0.41
CDH16-201ENST00000299752 LRP10Q7Z4F1 713 aa17.61■□□□□ 0.41
CDH16-201ENST00000299752 ZBTB3Q9H5J0 574 aa17.61■□□□□ 0.41
CDH16-201ENST00000299752 DDX58O95786 925 aaKnown RBP17.61■□□□□ 0.41
CDH16-201ENST00000299752 KCNQ4P56696 695 aa17.61■□□□□ 0.41
CDH16-201ENST00000299752 C16orf71Q8IYS4 520 aaPredicted RBP17.61■□□□□ 0.41
CDH16-201ENST00000299752 C9orf78Q9NZ63 289 aaPredicted RBP17.61■□□□□ 0.41
CDH16-201ENST00000299752 EXOC6BQ9Y2D4 811 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms