RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 SMARCA5O60264 1052 aaPredicted RBP32.06■■■□□ 2.72
SDCCAG3-201ENST00000298537 MAP3K2Q9Y2U5 619 aa32.06■■■□□ 2.72
SDCCAG3-201ENST00000298537 COL22A1Q8NFW1 1626 aaPredicted RBP32.05■■■□□ 2.72
SDCCAG3-201ENST00000298537 NBPF7P0C2Y1 421 aaPredicted RBP32.04■■■□□ 2.72
SDCCAG3-201ENST00000298537 DDX21Q9NR30 783 aaKnown RBP eCLIP32.04■■■□□ 2.72
SDCCAG3-201ENST00000298537 N4BP2Q86UW6 1770 aaPredicted RBP32.04■■■□□ 2.72
SDCCAG3-201ENST00000298537 PHLPP1O60346 1717 aa32.03■■■□□ 2.72
SDCCAG3-201ENST00000298537 GNAI3P08754 354 aa32.03■■■□□ 2.72
SDCCAG3-201ENST00000298537 OTUD7AQ8TE49 926 aaPredicted RBP32.03■■■□□ 2.72
SDCCAG3-201ENST00000298537 NKX1-1Q15270 411 aaPredicted RBP32.03■■■□□ 2.72
SDCCAG3-201ENST00000298537 COL14A1Q05707 1796 aaKnown RBP32.02■■■□□ 2.72
SDCCAG3-201ENST00000298537 FMNL2Q96PY5 1086 aa32.02■■■□□ 2.72
SDCCAG3-201ENST00000298537 CHMP4AQ9BY43 222 aa32.02■■■□□ 2.72
SDCCAG3-201ENST00000298537 GLI3P10071 1580 aa32.01■■■□□ 2.72
SDCCAG3-201ENST00000298537 NUTM2BA6NNL0 878 aaPredicted RBP32.01■■■□□ 2.71
SDCCAG3-201ENST00000298537 NUTM2EB1AL46 878 aaPredicted RBP32.01■■■□□ 2.71
SDCCAG3-201ENST00000298537 SNRPA1P09661 255 aaKnown RBP32.01■■■□□ 2.71
SDCCAG3-201ENST00000298537 NUTM2AQ8IVF1 878 aaPredicted RBP32.01■■■□□ 2.71
SDCCAG3-201ENST00000298537 HYPKQ9NX55 129 aa32.01■■■□□ 2.71
SDCCAG3-201ENST00000298537 UBTFL1P0CB47 393 aaPredicted RBP32■■■□□ 2.71
SDCCAG3-201ENST00000298537 CWF19L2Q2TBE0 894 aaKnown RBP32■■■□□ 2.71
SDCCAG3-201ENST00000298537 KSR2Q6VAB6 950 aa32■■■□□ 2.71
SDCCAG3-201ENST00000298537 EXOC6BQ9Y2D4 811 aa32■■■□□ 2.71
SDCCAG3-201ENST00000298537 ERVV-2B6SEH9 535 aa31.98■■■□□ 2.71
SDCCAG3-201ENST00000298537 LRP10Q7Z4F1 713 aa31.98■■■□□ 2.71
SDCCAG3-201ENST00000298537 PTCD1O75127 700 aaKnown RBP31.97■■■□□ 2.71
SDCCAG3-201ENST00000298537 ATP8B2P98198 1209 aa31.97■■■□□ 2.71
SDCCAG3-201ENST00000298537 XAGE3Q8WTP9 111 aa31.97■■■□□ 2.71
SDCCAG3-201ENST00000298537 TOGARAM1Q9Y4F4 1720 aa31.96■■■□□ 2.71
SDCCAG3-201ENST00000298537 COPS6Q7L5N1 327 aa31.96■■■□□ 2.71
SDCCAG3-201ENST00000298537 TOM1O60784 492 aa31.95■■■□□ 2.71
SDCCAG3-201ENST00000298537 PLEKHM2Q8IWE5 1019 aa31.95■■■□□ 2.71
SDCCAG3-201ENST00000298537 DISP2A7MBM2 1401 aa31.95■■■□□ 2.7
SDCCAG3-201ENST00000298537 HMMRO75330 724 aa31.94■■■□□ 2.7
SDCCAG3-201ENST00000298537 UBAP1LF5GYI3 381 aa31.91■■■□□ 2.7
SDCCAG3-201ENST00000298537 NOP58Q9Y2X3 529 aaKnown RBP31.91■■■□□ 2.7
SDCCAG3-201ENST00000298537 KCPQ6ZWJ8 1503 aa31.91■■■□□ 2.7
SDCCAG3-201ENST00000298537 GSPT1P15170 499 aaKnown RBP31.91■■■□□ 2.7
SDCCAG3-201ENST00000298537 PPP1R42Q7Z4L9 355 aa31.91■■■□□ 2.7
SDCCAG3-201ENST00000298537 RIC3Q7Z5B4 369 aa31.9■■■□□ 2.7
SDCCAG3-201ENST00000298537 NBPF26B4DH59 902 aa31.89■■■□□ 2.7
SDCCAG3-201ENST00000298537 NBPF14Q5TI25 921 aa31.89■■■□□ 2.7
SDCCAG3-201ENST00000298537 NBPF10Q6P3W6 841 aaKnown RBP31.89■■■□□ 2.7
SDCCAG3-201ENST00000298537 NBPF15Q8N660 670 aa31.89■■■□□ 2.7
SDCCAG3-201ENST00000298537 IGKV5-2P06315 115 aa31.89■■■□□ 2.7
SDCCAG3-201ENST00000298537 BMP2KLQ5H9B9 411 aa31.89■■■□□ 2.7
SDCCAG3-201ENST00000298537 PLCH1Q4KWH8 1693 aa31.89■■■□□ 2.7
SDCCAG3-201ENST00000298537 PIGBQ92521 554 aa31.88■■■□□ 2.69
SDCCAG3-201ENST00000298537 ASAP1Q9ULH1 1129 aa31.88■■■□□ 2.69
SDCCAG3-201ENST00000298537 SLC4A3P48751 1232 aa31.87■■■□□ 2.69
SDCCAG3-201ENST00000298537 TMOD3Q9NYL9 352 aa31.87■■■□□ 2.69
SDCCAG3-201ENST00000298537 ZBTB47Q9UFB7 747 aaPredicted RBP31.87■■■□□ 2.69
SDCCAG3-201ENST00000298537 DDX58O95786 925 aaKnown RBP31.87■■■□□ 2.69
SDCCAG3-201ENST00000298537 A1BGP04217 495 aa31.87■■■□□ 2.69
SDCCAG3-201ENST00000298537 C9orf78Q9NZ63 289 aaPredicted RBP31.86■■■□□ 2.69
SDCCAG3-201ENST00000298537 UBR2Q8IWV8 1755 aa31.86■■■□□ 2.69
SDCCAG3-201ENST00000298537 MFAP1P55081 439 aaKnown RBP31.86■■■□□ 2.69
SDCCAG3-201ENST00000298537 SSH3Q8TE77 659 aa31.86■■■□□ 2.69
SDCCAG3-201ENST00000298537 ALDH1L1O75891 902 aa31.85■■■□□ 2.69
SDCCAG3-201ENST00000298537 LINS1Q8NG48 757 aa31.85■■■□□ 2.69
SDCCAG3-201ENST00000298537 PAPPAQ13219 1627 aa31.85■■■□□ 2.69
SDCCAG3-201ENST00000298537 MYD88Q99836 296 aa31.84■■■□□ 2.69
SDCCAG3-201ENST00000298537 SRGAP3O43295 1099 aa31.84■■■□□ 2.69
SDCCAG3-201ENST00000298537 TNS2Q63HR2 1409 aa31.83■■■□□ 2.69
SDCCAG3-201ENST00000298537 TSHZ3Q63HK5 1081 aa31.83■■■□□ 2.69
SDCCAG3-201ENST00000298537 ANKRD13DQ6ZTN6 518 aa31.83■■■□□ 2.69
SDCCAG3-201ENST00000298537 POLA2Q14181 598 aa31.82■■■□□ 2.68
SDCCAG3-201ENST00000298537 JARID2Q92833 1246 aaPredicted RBP31.82■■■□□ 2.68
SDCCAG3-201ENST00000298537 IBTKQ9P2D0 1353 aaPredicted RBP31.82■■■□□ 2.68
SDCCAG3-201ENST00000298537 EXOC5O00471 708 aa31.82■■■□□ 2.68
SDCCAG3-201ENST00000298537 KAZALD1Q96I82 304 aa31.82■■■□□ 2.68
SDCCAG3-201ENST00000298537 SPATA31A1Q5TZJ5 1347 aa31.81■■■□□ 2.68
SDCCAG3-201ENST00000298537 LAMB4A4D0S4 1761 aa31.81■■■□□ 2.68
SDCCAG3-201ENST00000298537 KAT6BQ8WYB5 2073 aa31.81■■■□□ 2.68
SDCCAG3-201ENST00000298537 NRAPQ86VF7 1730 aa31.8■■■□□ 2.68
SDCCAG3-201ENST00000298537 TTC22Q5TAA0 569 aa31.8■■■□□ 2.68
SDCCAG3-201ENST00000298537 SUCLG2Q96I99 432 aa31.8■■■□□ 2.68
SDCCAG3-201ENST00000298537 METTL22Q9BUU2 404 aaPredicted RBP31.8■■■□□ 2.68
SDCCAG3-201ENST00000298537 NEURL1BA8MQ27 555 aa31.8■■■□□ 2.68
SDCCAG3-201ENST00000298537 GRM8O00222 908 aa31.8■■■□□ 2.68
SDCCAG3-201ENST00000298537 TTLL7Q6ZT98 887 aa31.8■■■□□ 2.68
SDCCAG3-201ENST00000298537 ATG3Q9NT62 314 aa31.8■■■□□ 2.68
SDCCAG3-201ENST00000298537 TBC1D32Q96NH3 1257 aa31.79■■■□□ 2.68
SDCCAG3-201ENST00000298537 LRRCC1Q9C099 1032 aa31.79■■■□□ 2.68
SDCCAG3-201ENST00000298537 SURF6O75683 361 aaKnown RBP31.78■■■□□ 2.68
SDCCAG3-201ENST00000298537 IL1RAPL2Q9NP60 686 aa31.78■■■□□ 2.68
SDCCAG3-201ENST00000298537 ATP5J2-PTCD1G3V325 749 aa31.78■■■□□ 2.68
SDCCAG3-201ENST00000298537 ERICH6Q7L0X2 663 aa31.78■■■□□ 2.68
SDCCAG3-201ENST00000298537 SYTL4Q96C24 671 aaPredicted RBP31.78■■■□□ 2.68
SDCCAG3-201ENST00000298537 TBC1D9Q6ZT07 1266 aa31.77■■■□□ 2.68
SDCCAG3-201ENST00000298537 ITGB4P16144 1822 aa31.76■■■□□ 2.67
SDCCAG3-201ENST00000298537 CCDC9Q9Y3X0 531 aaKnown RBP31.76■■■□□ 2.67
SDCCAG3-201ENST00000298537 GCKRQ14397 625 aa31.75■■■□□ 2.67
SDCCAG3-201ENST00000298537 DNAJC10Q8IXB1 793 aa31.75■■■□□ 2.67
SDCCAG3-201ENST00000298537 RBM42Q9BTD8 480 aaKnown RBP31.75■■■□□ 2.67
SDCCAG3-201ENST00000298537 BICC1Q9H694 974 aaKnown RBP31.75■■■□□ 2.67
SDCCAG3-201ENST00000298537 WNK3Q9BYP7 1800 aa31.74■■■□□ 2.67
SDCCAG3-201ENST00000298537 SALL3Q9BXA9 1300 aa31.74■■■□□ 2.67
SDCCAG3-201ENST00000298537 NEXNQ0ZGT2 675 aa31.74■■■□□ 2.67
SDCCAG3-201ENST00000298537 PA2G4Q9UQ80 394 aaKnown RBP31.74■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms