RNA–Protein interactions for RNA: ENST00000296122.10

PPP1CB-201, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 3,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-201ENST00000296122 CDCA7Q9BWT1 371 aaPredicted RBP16.28■□□□□ 0.2
PPP1CB-201ENST00000296122 SRGAP3O43295 1099 aa16.27■□□□□ 0.2
PPP1CB-201ENST00000296122 COPS6Q7L5N1 327 aa16.27■□□□□ 0.2
PPP1CB-201ENST00000296122 EXOC6BQ9Y2D4 811 aa16.27■□□□□ 0.2
PPP1CB-201ENST00000296122 PHRF1Q9P1Y6 1649 aaKnown RBP16.27■□□□□ 0.19
PPP1CB-201ENST00000296122 C8orf34Q49A92 452 aa16.27■□□□□ 0.19
PPP1CB-201ENST00000296122 LRRCC1Q9C099 1032 aa16.27■□□□□ 0.19
PPP1CB-201ENST00000296122 ABCC6O95255 1503 aa16.26■□□□□ 0.19
PPP1CB-201ENST00000296122 COL5A2P05997 1499 aaPredicted RBP16.26■□□□□ 0.19
PPP1CB-201ENST00000296122 ANKRD13DQ6ZTN6 518 aa16.26■□□□□ 0.19
PPP1CB-201ENST00000296122 LINS1Q8NG48 757 aa16.26■□□□□ 0.19
PPP1CB-201ENST00000296122 DDB1Q16531 1140 aa16.25■□□□□ 0.19
PPP1CB-201ENST00000296122 KAT6BQ8WYB5 2073 aa16.25■□□□□ 0.19
PPP1CB-201ENST00000296122 PRAMEF22A3QJZ6 481 aa16.25■□□□□ 0.19
PPP1CB-201ENST00000296122 STARD3NLO95772 234 aa16.25■□□□□ 0.19
PPP1CB-201ENST00000296122 ATP8B2P98198 1209 aa16.25■□□□□ 0.19
PPP1CB-201ENST00000296122 MYD88Q99836 296 aa16.25■□□□□ 0.19
PPP1CB-201ENST00000296122 TEX13AQ9BXU3 409 aaPredicted RBP16.25■□□□□ 0.19
PPP1CB-201ENST00000296122 USP16Q9Y5T5 823 aa16.24■□□□□ 0.19
PPP1CB-201ENST00000296122 CAMTA1Q9Y6Y1 1673 aa16.24■□□□□ 0.19
PPP1CB-201ENST00000296122 PROSER3Q2NL68 480 aa16.24■□□□□ 0.19
PPP1CB-201ENST00000296122 CHMP3Q9Y3E7 222 aa16.24■□□□□ 0.19
PPP1CB-201ENST00000296122 SIRT2Q8IXJ6 389 aa16.23■□□□□ 0.19
PPP1CB-201ENST00000296122 USP44Q9H0E7 712 aa16.23■□□□□ 0.19
PPP1CB-201ENST00000296122 PIP4K2AP48426 406 aaPredicted RBP16.23■□□□□ 0.19
PPP1CB-201ENST00000296122 C8orf37Q96NL8 207 aa16.23■□□□□ 0.19
PPP1CB-201ENST00000296122 PPP1R42Q7Z4L9 355 aa16.23■□□□□ 0.19
PPP1CB-201ENST00000296122 SMARCA5O60264 1052 aaPredicted RBP16.22■□□□□ 0.19
PPP1CB-201ENST00000296122 G3BP1Q13283 466 aaKnown RBP eCLIP16.22■□□□□ 0.191e-6■□□□□ 11
PPP1CB-201ENST00000296122 BMP2KLQ5H9B9 411 aa16.22■□□□□ 0.19
PPP1CB-201ENST00000296122 BEND3Q5T5X7 828 aa16.22■□□□□ 0.19
PPP1CB-201ENST00000296122 KIF6Q6ZMV9 814 aa16.22■□□□□ 0.19
PPP1CB-201ENST00000296122 GPATCH3Q96I76 525 aa16.22■□□□□ 0.19
PPP1CB-201ENST00000296122 KDM6AO15550 1401 aaPredicted RBP16.22■□□□□ 0.19
PPP1CB-201ENST00000296122 TRIM6-TRIM34B2RNG4 842 aa16.22■□□□□ 0.19
PPP1CB-201ENST00000296122 GRM8O00222 908 aa16.22■□□□□ 0.19
PPP1CB-201ENST00000296122 CWF19L2Q2TBE0 894 aaKnown RBP16.22■□□□□ 0.19
PPP1CB-201ENST00000296122 RGPD2P0DJD1 1756 aa16.22■□□□□ 0.19
PPP1CB-201ENST00000296122 CDC45O75419 566 aa16.21■□□□□ 0.19
PPP1CB-201ENST00000296122 RAB11FIP3O75154 756 aa16.21■□□□□ 0.19
PPP1CB-201ENST00000296122 ERBB4Q15303 1308 aa16.2■□□□□ 0.18
PPP1CB-201ENST00000296122 ERC1Q8IUD2 1116 aa16.2■□□□□ 0.18
PPP1CB-201ENST00000296122 CLASRPQ8N2M8 674 aaKnown RBP16.2■□□□□ 0.18
PPP1CB-201ENST00000296122 RGS12O14924 1447 aa16.19■□□□□ 0.18
PPP1CB-201ENST00000296122 RTL5Q5HYW3 569 aaPredicted RBP16.19■□□□□ 0.18
PPP1CB-201ENST00000296122 NBPF7P0C2Y1 421 aaPredicted RBP16.19■□□□□ 0.18
PPP1CB-201ENST00000296122 KIF1BPQ96EK5 621 aa16.19■□□□□ 0.18
PPP1CB-201ENST00000296122 HEG1Q9ULI3 1381 aa16.19■□□□□ 0.18
PPP1CB-201ENST00000296122 LMO7Q8WWI1 1683 aa16.19■□□□□ 0.18
PPP1CB-201ENST00000296122 NKX1-1Q15270 411 aaPredicted RBP16.19■□□□□ 0.18
PPP1CB-201ENST00000296122 RGPD5Q99666 1765 aa16.18■□□□□ 0.18
PPP1CB-201ENST00000296122 METTL22Q9BUU2 404 aaPredicted RBP16.18■□□□□ 0.18
PPP1CB-201ENST00000296122 RILPL2Q969X0 211 aa16.18■□□□□ 0.18
PPP1CB-201ENST00000296122 C22orf23Q9BZE7 217 aa16.18■□□□□ 0.18
PPP1CB-201ENST00000296122 IL1RAPL2Q9NP60 686 aa16.18■□□□□ 0.18
PPP1CB-201ENST00000296122 THRAP3Q9Y2W1 955 aaKnown RBP16.18■□□□□ 0.18
PPP1CB-201ENST00000296122 XIRP1Q702N8 1843 aaKnown RBP16.18■□□□□ 0.18
PPP1CB-201ENST00000296122 PNMA6EA0A0J9YXQ4 647 aa16.18■□□□□ 0.18
PPP1CB-201ENST00000296122 IFIT2P09913 472 aaKnown RBP16.18■□□□□ 0.18
PPP1CB-201ENST00000296122 ZBTB3Q9H5J0 574 aa16.18■□□□□ 0.18
PPP1CB-201ENST00000296122 A0A087WZG4 1122 aa16.17■□□□□ 0.18
PPP1CB-201ENST00000296122 ATP5J2-PTCD1G3V325 749 aa16.17■□□□□ 0.18
PPP1CB-201ENST00000296122 HSP90AA1P07900 732 aaKnown RBP16.17■□□□□ 0.18
PPP1CB-201ENST00000296122 FAM208AQ9UK61 1670 aaKnown RBP16.17■□□□□ 0.18
PPP1CB-201ENST00000296122 A1BGP04217 495 aa16.17■□□□□ 0.18
PPP1CB-201ENST00000296122 PLBD2Q8NHP8 589 aa16.17■□□□□ 0.18
PPP1CB-201ENST00000296122 PXDNLA1KZ92 1463 aa16.16■□□□□ 0.18
PPP1CB-201ENST00000296122 LRRC37A3O60309 1634 aa16.16■□□□□ 0.18
PPP1CB-201ENST00000296122 PLEKHM2Q8IWE5 1019 aa16.16■□□□□ 0.18
PPP1CB-201ENST00000296122 C16orf71Q8IYS4 520 aaPredicted RBP16.16■□□□□ 0.18
PPP1CB-201ENST00000296122 MX1P20591 662 aa16.15■□□□□ 0.18
PPP1CB-201ENST00000296122 PRIM1P49642 420 aaKnown RBP16.15■□□□□ 0.18
PPP1CB-201ENST00000296122 UBE3BQ7Z3V4 1068 aa16.15■□□□□ 0.18
PPP1CB-201ENST00000296122 TAF7LQ5H9L4 462 aa16.15■□□□□ 0.18
PPP1CB-201ENST00000296122 TTC22Q5TAA0 569 aa16.15■□□□□ 0.18
PPP1CB-201ENST00000296122 ACSBG1Q96GR2 724 aa16.15■□□□□ 0.18
PPP1CB-201ENST00000296122 ASAP1Q9ULH1 1129 aa16.15■□□□□ 0.18
PPP1CB-201ENST00000296122 ADCY9O60503 1353 aa16.15■□□□□ 0.18
PPP1CB-201ENST00000296122 PIGBQ92521 554 aa16.14■□□□□ 0.17
PPP1CB-201ENST00000296122 CWC25Q9NXE8 425 aaPredicted RBP16.14■□□□□ 0.17
PPP1CB-201ENST00000296122 ROBO1Q9Y6N7 1651 aa16.14■□□□□ 0.17
PPP1CB-201ENST00000296122 ERC2O15083 957 aa16.14■□□□□ 0.17
PPP1CB-201ENST00000296122 DNAJC10Q8IXB1 793 aa16.14■□□□□ 0.17
PPP1CB-201ENST00000296122 SSH3Q8TE77 659 aa16.14■□□□□ 0.17
PPP1CB-201ENST00000296122 HSCBQ8IWL3 235 aa16.14■□□□□ 0.17
PPP1CB-201ENST00000296122 RHPN1Q8TCX5 695 aa16.14■□□□□ 0.17
PPP1CB-201ENST00000296122 ATP10DQ9P241 1426 aa16.13■□□□□ 0.17
PPP1CB-201ENST00000296122 NEURL1BA8MQ27 555 aa16.13■□□□□ 0.17
PPP1CB-201ENST00000296122 REC8O95072 547 aa16.13■□□□□ 0.17
PPP1CB-201ENST00000296122 GCKRQ14397 625 aa16.13■□□□□ 0.17
PPP1CB-201ENST00000296122 SIL1Q9H173 461 aa16.13■□□□□ 0.17
PPP1CB-201ENST00000296122 JCADQ9P266 1359 aa16.13■□□□□ 0.17
PPP1CB-201ENST00000296122 MCCP23508 829 aa16.12■□□□□ 0.17
PPP1CB-201ENST00000296122 FAM98CQ17RN3 349 aaKnown RBP16.12■□□□□ 0.17
PPP1CB-201ENST00000296122 UNC5CLQ8IV45 518 aa16.12■□□□□ 0.17
PPP1CB-201ENST00000296122 PDE1AP54750 535 aa16.12■□□□□ 0.17
PPP1CB-201ENST00000296122 NUTM1Q86Y26 1132 aa16.11■□□□□ 0.17
PPP1CB-201ENST00000296122 SEC24BO95487 1268 aa16.11■□□□□ 0.17
PPP1CB-201ENST00000296122 PDIA6Q15084 440 aa16.11■□□□□ 0.17
PPP1CB-201ENST00000296122 HSP90AB3PQ58FF7 597 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms