RNA–Protein interactions for RNA: ENST00000294785.9

NCSTN-201, Transcript of nicastrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCSTN, Length 2,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-201ENST00000294785 LTV1Q96GA3 475 aaPredicted RBP16.61■□□□□ 0.25
NCSTN-201ENST00000294785 PHAXQ9H814 394 aaKnown RBP16.61■□□□□ 0.25
NCSTN-201ENST00000294785 PHF8Q9UPP1 1060 aa16.61■□□□□ 0.25
NCSTN-201ENST00000294785 OVOS2A0A0G2JMS6 1433 aa16.6■□□□□ 0.25
NCSTN-201ENST00000294785 NCAPD2Q15021 1401 aa16.6■□□□□ 0.25
NCSTN-201ENST00000294785 UNC5CLQ8IV45 518 aa16.6■□□□□ 0.25
NCSTN-201ENST00000294785 RHPN1Q8TCX5 695 aa16.6■□□□□ 0.25
NCSTN-201ENST00000294785 SURF6O75683 361 aaKnown RBP16.59■□□□□ 0.25
NCSTN-201ENST00000294785 KCNH5Q8NCM2 988 aa16.59■□□□□ 0.25
NCSTN-201ENST00000294785 PI4K2BQ8TCG2 481 aa16.59■□□□□ 0.25
NCSTN-201ENST00000294785 USP42Q9H9J4 1324 aaKnown RBP16.59■□□□□ 0.25
NCSTN-201ENST00000294785 LRSAM1Q6UWE0 723 aa16.59■□□□□ 0.25
NCSTN-201ENST00000294785 ZSCAN30Q86W11 494 aa16.59■□□□□ 0.25
NCSTN-201ENST00000294785 DNAAF4Q8WXU2 420 aa16.59■□□□□ 0.25
NCSTN-201ENST00000294785 NAP1L5Q96NT1 182 aaPredicted RBP16.59■□□□□ 0.25
NCSTN-201ENST00000294785 RAD50Q92878 1312 aa16.59■□□□□ 0.25
NCSTN-201ENST00000294785 BEND3Q5T5X7 828 aa16.58■□□□□ 0.24
NCSTN-201ENST00000294785 CNTROBQ8N137 903 aa16.58■□□□□ 0.24
NCSTN-201ENST00000294785 IL1RAPL2Q9NP60 686 aa16.58■□□□□ 0.24
NCSTN-201ENST00000294785 SRGAP3O43295 1099 aa16.58■□□□□ 0.24
NCSTN-201ENST00000294785 AKAP4Q5JQC9 854 aa16.58■□□□□ 0.24
NCSTN-201ENST00000294785 SGSM2O43147 1006 aa16.57■□□□□ 0.24
NCSTN-201ENST00000294785 PLEKHG5O94827 1062 aa16.57■□□□□ 0.24
NCSTN-201ENST00000294785 USHBP1Q8N6Y0 703 aa16.57■□□□□ 0.24
NCSTN-201ENST00000294785 PDLIM2Q96JY6 352 aa16.57■□□□□ 0.24
NCSTN-201ENST00000294785 TTC41PQ6P2S7 1318 aa16.57■□□□□ 0.24
NCSTN-201ENST00000294785 MTX1Q13505 466 aa16.56■□□□□ 0.24
NCSTN-201ENST00000294785 NUTM1Q86Y26 1132 aa16.56■□□□□ 0.24
NCSTN-201ENST00000294785 HDAC5Q9UQL6 1122 aa16.56■□□□□ 0.24
NCSTN-201ENST00000294785 RGPD2P0DJD1 1756 aa16.56■□□□□ 0.24
NCSTN-201ENST00000294785 WDR33Q9C0J8 1336 aaKnown RBP16.56■□□□□ 0.24
NCSTN-201ENST00000294785 PRIM1P49642 420 aaKnown RBP16.56■□□□□ 0.24
NCSTN-201ENST00000294785 NBPF6Q5VWK0 638 aa16.56■□□□□ 0.24
NCSTN-201ENST00000294785 C14orf37Q86TY3 774 aa16.56■□□□□ 0.24
NCSTN-201ENST00000294785 NBPF4Q96M43 638 aa16.56■□□□□ 0.24
NCSTN-201ENST00000294785 RBSNQ9H1K0 784 aa16.56■□□□□ 0.24
NCSTN-201ENST00000294785 CHPF2Q9P2E5 772 aa16.56■□□□□ 0.24
NCSTN-201ENST00000294785 LMTK3Q96Q04 1460 aa16.56■□□□□ 0.24
NCSTN-201ENST00000294785 AMOTQ4VCS5 1084 aa16.56■□□□□ 0.24
NCSTN-201ENST00000294785 SYAP1Q96A49 352 aaPredicted RBP16.56■□□□□ 0.24
NCSTN-201ENST00000294785 TMEM63CQ9P1W3 806 aa16.56■□□□□ 0.24
NCSTN-201ENST00000294785 NBPF7P0C2Y1 421 aaPredicted RBP16.55■□□□□ 0.24
NCSTN-201ENST00000294785 EIF2S2P20042 333 aaKnown RBP16.55■□□□□ 0.24
NCSTN-201ENST00000294785 TEFQ10587 303 aa16.55■□□□□ 0.24
NCSTN-201ENST00000294785 CAMTA1Q9Y6Y1 1673 aa16.55■□□□□ 0.24
NCSTN-201ENST00000294785 PI4KAP2A4QPH2 592 aa16.55■□□□□ 0.24
NCSTN-201ENST00000294785 PLEKHO1Q53GL0 409 aaPredicted RBP16.55■□□□□ 0.24
NCSTN-201ENST00000294785 PI4KAP1Q8N8J0 262 aa16.55■□□□□ 0.24
NCSTN-201ENST00000294785 LGR6Q9HBX8 967 aa16.54■□□□□ 0.24
NCSTN-201ENST00000294785 DBF4Q9UBU7 674 aaPredicted RBP16.54■□□□□ 0.24
NCSTN-201ENST00000294785 ADCY9O60503 1353 aa16.54■□□□□ 0.24
NCSTN-201ENST00000294785 GLRX3O76003 335 aaKnown RBP16.54■□□□□ 0.24
NCSTN-201ENST00000294785 MSNP26038 577 aaKnown RBP16.54■□□□□ 0.24
NCSTN-201ENST00000294785 UPF3BQ9BZI7 483 aaKnown RBP16.54■□□□□ 0.24
NCSTN-201ENST00000294785 RBM27Q9P2N5 1060 aaKnown RBP16.54■□□□□ 0.24
NCSTN-201ENST00000294785 ZNF142P52746 1687 aaPredicted RBP16.54■□□□□ 0.24
NCSTN-201ENST00000294785 BTBD11A6QL63 1104 aa16.53■□□□□ 0.24
NCSTN-201ENST00000294785 ALDH1L1O75891 902 aa16.53■□□□□ 0.24
NCSTN-201ENST00000294785 IL25Q9H293 177 aa16.53■□□□□ 0.24
NCSTN-201ENST00000294785 LSG1Q9H089 658 aaKnown RBP16.53■□□□□ 0.24
NCSTN-201ENST00000294785 SLIT3O75094 1523 aa16.53■□□□□ 0.24
NCSTN-201ENST00000294785 SIPA1L3O60292 1781 aaPredicted RBP16.53■□□□□ 0.24
NCSTN-201ENST00000294785 KIAA1211Q6ZU35 1233 aa16.52■□□□□ 0.24
NCSTN-201ENST00000294785 PHF14O94880 888 aa16.52■□□□□ 0.24
NCSTN-201ENST00000294785 ZNF530Q6P9A1 599 aaPredicted RBP16.52■□□□□ 0.24
NCSTN-201ENST00000294785 ERC1Q8IUD2 1116 aa16.52■□□□□ 0.24
NCSTN-201ENST00000294785 SNX14Q9Y5W7 946 aa16.52■□□□□ 0.24
NCSTN-201ENST00000294785 SYCE3A1L190 88 aa16.52■□□□□ 0.23
NCSTN-201ENST00000294785 RUFY2Q8WXA3 655 aa16.52■□□□□ 0.23
NCSTN-201ENST00000294785 TTC14Q96N46 770 aa16.52■□□□□ 0.23
NCSTN-201ENST00000294785 SETD1BQ9UPS6 1966 aaKnown RBP16.52■□□□□ 0.23
NCSTN-201ENST00000294785 TMEM87AQ8NBN3 555 aa16.51■□□□□ 0.23
NCSTN-201ENST00000294785 HEG1Q9ULI3 1381 aa16.51■□□□□ 0.23
NCSTN-201ENST00000294785 ADAMTS7Q9UKP4 1686 aa16.51■□□□□ 0.23
NCSTN-201ENST00000294785 PSME1Q06323 249 aa16.51■□□□□ 0.23
NCSTN-201ENST00000294785 CLASRPQ8N2M8 674 aaKnown RBP16.51■□□□□ 0.23
NCSTN-201ENST00000294785 GPATCH3Q96I76 525 aa16.51■□□□□ 0.23
NCSTN-201ENST00000294785 NSFL1CQ9UNZ2 370 aaKnown RBP16.51■□□□□ 0.23
NCSTN-201ENST00000294785 FOXD4L5Q5VV16 416 aaPredicted RBP16.5■□□□□ 0.23
NCSTN-201ENST00000294785 NOL8Q76FK4 1167 aaKnown RBP16.5■□□□□ 0.23
NCSTN-201ENST00000294785 KLHL34Q8N239 644 aa16.5■□□□□ 0.23
NCSTN-201ENST00000294785 FOXD4L4Q8WXT5 416 aaPredicted RBP16.5■□□□□ 0.23
NCSTN-201ENST00000294785 NOL7Q9UMY1 257 aaKnown RBP16.5■□□□□ 0.23
NCSTN-201ENST00000294785 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.5■□□□□ 0.23
NCSTN-201ENST00000294785 RNMTO43148 476 aaKnown RBP16.49■□□□□ 0.23
NCSTN-201ENST00000294785 C1orf141Q5JVX7 400 aa16.49■□□□□ 0.23
NCSTN-201ENST00000294785 MAP4K4O95819 1239 aaPredicted RBP16.49■□□□□ 0.23
NCSTN-201ENST00000294785 MCM5P33992 734 aa16.49■□□□□ 0.23
NCSTN-201ENST00000294785 OS9Q13438 667 aaPredicted RBP16.49■□□□□ 0.23
NCSTN-201ENST00000294785 ANKLE2Q86XL3 938 aa16.49■□□□□ 0.23
NCSTN-201ENST00000294785 LIMCH1Q9UPQ0 1083 aa16.49■□□□□ 0.23
NCSTN-201ENST00000294785 RPAP1Q9BWH6 1393 aaPredicted RBP16.49■□□□□ 0.23
NCSTN-201ENST00000294785 TPM2P07951 284 aa16.49■□□□□ 0.23
NCSTN-201ENST00000294785 KSR2Q6VAB6 950 aa16.49■□□□□ 0.23
NCSTN-201ENST00000294785 KCNQ3O43525 872 aa16.48■□□□□ 0.23
NCSTN-201ENST00000294785 CHAMP1Q96JM3 812 aa16.48■□□□□ 0.23
NCSTN-201ENST00000294785 DIAPH3Q9NSV4 1193 aa16.48■□□□□ 0.23
NCSTN-201ENST00000294785 ECHDC1Q9NTX5 307 aa16.48■□□□□ 0.23
NCSTN-201ENST00000294785 PXDNQ92626 1479 aa16.48■□□□□ 0.23
NCSTN-201ENST00000294785 TSPY26PQ9H489 355 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms