RNA–Protein interactions for RNA: ENST00000265343.9

AFF4-201, Transcript of AF4/FMR2 family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AFF4, Length 9,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-201ENST00000265343 TNPO1Q92973 898 aaKnown RBP17.25■□□□□ 0.35
AFF4-201ENST00000265343 ZHX3Q9H4I2 956 aa17.25■□□□□ 0.35
AFF4-201ENST00000265343 IFT74Q96LB3 600 aa17.25■□□□□ 0.35
AFF4-201ENST00000265343 RSPH14Q9UHP6 348 aa17.25■□□□□ 0.35
AFF4-201ENST00000265343 TSNARE1Q96NA8 513 aa17.24■□□□□ 0.35
AFF4-201ENST00000265343 HOMER2Q9NSB8 354 aa17.24■□□□□ 0.35
AFF4-201ENST00000265343 HYPKQ9NX55 129 aa17.24■□□□□ 0.35
AFF4-201ENST00000265343 TRERF1Q96PN7 1200 aa17.23■□□□□ 0.35
AFF4-201ENST00000265343 TTC12Q9H892 705 aaPredicted RBP17.23■□□□□ 0.35
AFF4-201ENST00000265343 SELENOOQ9BVL4 669 aa17.23■□□□□ 0.35
AFF4-201ENST00000265343 A0A1W2PRG0 241 aa17.23■□□□□ 0.35
AFF4-201ENST00000265343 CCDC110Q8TBZ0 833 aa17.23■□□□□ 0.35
AFF4-201ENST00000265343 CEP57Q86XR8 500 aa17.23■□□□□ 0.35
AFF4-201ENST00000265343 USP25Q9UHP3 1055 aa17.23■□□□□ 0.35
AFF4-201ENST00000265343 HFM1A2PYH4 1435 aa17.23■□□□□ 0.35
AFF4-201ENST00000265343 CCDC160A6NGH7 325 aa17.23■□□□□ 0.35
AFF4-201ENST00000265343 ARFGAP2Q8N6H7 521 aa17.23■□□□□ 0.35
AFF4-201ENST00000265343 TACC1O75410 805 aa17.23■□□□□ 0.35
AFF4-201ENST00000265343 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.23■□□□□ 0.356e-8■■□□□ 12.5
AFF4-201ENST00000265343 PNISRQ8TF01 805 aaKnown RBP17.22■□□□□ 0.35
AFF4-201ENST00000265343 ZWINTO95229 277 aa17.22■□□□□ 0.35
AFF4-201ENST00000265343 LRSAM1Q6UWE0 723 aa17.22■□□□□ 0.35
AFF4-201ENST00000265343 NBPF11Q86T75 865 aa17.22■□□□□ 0.35
AFF4-201ENST00000265343 CCDC12Q8WUD4 166 aaPredicted RBP17.22■□□□□ 0.35
AFF4-201ENST00000265343 RPGRIP1LQ68CZ1 1315 aa17.22■□□□□ 0.35
AFF4-201ENST00000265343 MIPOL1Q8TD10 442 aa17.22■□□□□ 0.35
AFF4-201ENST00000265343 PPP1R14CQ8TAE6 165 aa17.22■□□□□ 0.35
AFF4-201ENST00000265343 RAPGEF4Q8WZA2 1011 aa17.22■□□□□ 0.35
AFF4-201ENST00000265343 MICALL1Q8N3F8 863 aa17.22■□□□□ 0.35
AFF4-201ENST00000265343 ATAD2Q6PL18 1390 aa17.21■□□□□ 0.35
AFF4-201ENST00000265343 LACTBP83111 547 aaPredicted RBP17.21■□□□□ 0.35
AFF4-201ENST00000265343 LUC7L2Q9Y383 392 aaKnown RBP17.21■□□□□ 0.35
AFF4-201ENST00000265343 SEC63Q9UGP8 760 aaKnown RBP17.21■□□□□ 0.35
AFF4-201ENST00000265343 TMC6Q7Z403 805 aa17.21■□□□□ 0.35
AFF4-201ENST00000265343 IQCGQ9H095 443 aaKnown RBP17.21■□□□□ 0.35
AFF4-201ENST00000265343 ZNF165P49910 485 aa17.21■□□□□ 0.35
AFF4-201ENST00000265343 ANAPC4Q9UJX5 808 aa17.21■□□□□ 0.35
AFF4-201ENST00000265343 FAM184BQ9ULE4 1060 aa17.21■□□□□ 0.35
AFF4-201ENST00000265343 ATP11AP98196 1134 aa17.21■□□□□ 0.35
AFF4-201ENST00000265343 AMPD3Q01432 767 aa17.21■□□□□ 0.35
AFF4-201ENST00000265343 RPAP2Q8IXW5 612 aaPredicted RBP17.21■□□□□ 0.35
AFF4-201ENST00000265343 PPP2R1AP30153 589 aa17.21■□□□□ 0.34
AFF4-201ENST00000265343 TNIP1Q15025 636 aa17.21■□□□□ 0.34
AFF4-201ENST00000265343 KIAA0753Q2KHM9 967 aa17.21■□□□□ 0.34
AFF4-201ENST00000265343 RNF168Q8IYW5 571 aaPredicted RBP17.21■□□□□ 0.34
AFF4-201ENST00000265343 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.21■□□□□ 0.34
AFF4-201ENST00000265343 LIMCH1Q9UPQ0 1083 aa17.2■□□□□ 0.34
AFF4-201ENST00000265343 MINK1Q8N4C8 1332 aaPredicted RBP17.2■□□□□ 0.34
AFF4-201ENST00000265343 SLU7O95391 586 aaKnown RBP17.2■□□□□ 0.34
AFF4-201ENST00000265343 CTAGE15A4D2H0 777 aa17.2■□□□□ 0.34
AFF4-201ENST00000265343 CTAGE8P0CG41 777 aa17.2■□□□□ 0.34
AFF4-201ENST00000265343 CTAGE6Q86UF2 777 aa17.2■□□□□ 0.34
AFF4-201ENST00000265343 CTAGE4Q8IX94 777 aa17.2■□□□□ 0.34
AFF4-201ENST00000265343 ZSCAN16Q9H4T2 348 aaPredicted RBP17.2■□□□□ 0.34
AFF4-201ENST00000265343 IBSPP21815 317 aaPredicted RBP17.2■□□□□ 0.34
AFF4-201ENST00000265343 CTNNA2P26232 953 aa17.2■□□□□ 0.34
AFF4-201ENST00000265343 GNG11P61952 73 aa17.2■□□□□ 0.34
AFF4-201ENST00000265343 CCDC77Q9BR77 488 aa17.2■□□□□ 0.34
AFF4-201ENST00000265343 NOLC1Q14978 699 aaKnown RBP eCLIP17.2■□□□□ 0.34
AFF4-201ENST00000265343 C8orf76Q96K31 380 aa17.2■□□□□ 0.34
AFF4-201ENST00000265343 JAKMIP2Q96AA8 810 aa17.2■□□□□ 0.34
AFF4-201ENST00000265343 ZSCAN23Q3MJ62 389 aa17.2■□□□□ 0.34
AFF4-201ENST00000265343 HDXQ7Z353 690 aa17.2■□□□□ 0.34
AFF4-201ENST00000265343 GABPB1Q06547 395 aaPredicted RBP17.19■□□□□ 0.34
AFF4-201ENST00000265343 CCDC129Q6ZRS4 1044 aa17.19■□□□□ 0.34
AFF4-201ENST00000265343 ZKSCAN5Q9Y2L8 839 aa17.19■□□□□ 0.34
AFF4-201ENST00000265343 HMOX1P09601 288 aa17.19■□□□□ 0.34
AFF4-201ENST00000265343 TMEM266Q2M3C6 531 aa17.19■□□□□ 0.34
AFF4-201ENST00000265343 CEP128Q6ZU80 1094 aa17.19■□□□□ 0.34
AFF4-201ENST00000265343 CNNM3Q8NE01 707 aa17.19■□□□□ 0.34
AFF4-201ENST00000265343 TRMT1Q9NXH9 659 aaKnown RBP17.19■□□□□ 0.34
AFF4-201ENST00000265343 GLRX3O76003 335 aaKnown RBP17.19■□□□□ 0.34
AFF4-201ENST00000265343 MAP3K9P80192 1104 aa17.19■□□□□ 0.34
AFF4-201ENST00000265343 C11orf95C9JLR9 678 aaPredicted RBP17.18■□□□□ 0.34
AFF4-201ENST00000265343 AK9Q5TCS8 1911 aa17.18■□□□□ 0.34
AFF4-201ENST00000265343 CWC27Q6UX04 472 aaKnown RBP17.18■□□□□ 0.34
AFF4-201ENST00000265343 CCDC114Q96M63 670 aa17.18■□□□□ 0.34
AFF4-201ENST00000265343 MTHFSP49914 203 aa17.18■□□□□ 0.34
AFF4-201ENST00000265343 LMNTD2Q8IXW0 634 aa17.18■□□□□ 0.34
AFF4-201ENST00000265343 SAMD15Q9P1V8 674 aa17.18■□□□□ 0.34
AFF4-201ENST00000265343 PSME1Q06323 249 aa17.18■□□□□ 0.34
AFF4-201ENST00000265343 CTNNBL1Q8WYA6 563 aaPredicted RBP17.18■□□□□ 0.34
AFF4-201ENST00000265343 SCLT1Q96NL6 688 aa17.18■□□□□ 0.34
AFF4-201ENST00000265343 MKRN1Q9UHC7 482 aaKnown RBP17.18■□□□□ 0.34
AFF4-201ENST00000265343 TERF1P54274 439 aa17.18■□□□□ 0.34
AFF4-201ENST00000265343 NAA25Q14CX7 972 aa17.18■□□□□ 0.34
AFF4-201ENST00000265343 CACNA2D3Q8IZS8 1091 aa17.18■□□□□ 0.34
AFF4-201ENST00000265343 RMND1Q9NWS8 449 aa17.17■□□□□ 0.34
AFF4-201ENST00000265343 MCM6Q14566 821 aa17.17■□□□□ 0.34
AFF4-201ENST00000265343 AACSQ86V21 672 aa17.17■□□□□ 0.34
AFF4-201ENST00000265343 CCDC97Q96F63 343 aaPredicted RBP17.17■□□□□ 0.34
AFF4-201ENST00000265343 A0A087WZG4 1122 aa17.17■□□□□ 0.34
AFF4-201ENST00000265343 GBP1P32455 592 aa17.17■□□□□ 0.34
AFF4-201ENST00000265343 FAM76AQ8TAV0 307 aa17.17■□□□□ 0.34
AFF4-201ENST00000265343 ACTN2P35609 894 aa17.17■□□□□ 0.34
AFF4-201ENST00000265343 ATP2A1O14983 1001 aa17.17■□□□□ 0.34
AFF4-201ENST00000265343 ARHGAP25P42331 645 aa17.17■□□□□ 0.34
AFF4-201ENST00000265343 ANKRD50Q9ULJ7 1429 aa17.17■□□□□ 0.34
AFF4-201ENST00000265343 TUBB2AQ13885 445 aa17.17■□□□□ 0.34
AFF4-201ENST00000265343 SETDB1Q15047 1291 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms