RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 SLC4A8Q2Y0W8 1093 aa17.48■□□□□ 0.39
NID1-201ENST00000264187 RRBP1Q9P2E9 1410 aaKnown RBP17.48■□□□□ 0.39
NID1-201ENST00000264187 GRIPAP1Q4V328 841 aa17.47■□□□□ 0.39
NID1-201ENST00000264187 MMRN2Q9H8L6 949 aa17.47■□□□□ 0.39
NID1-201ENST00000264187 MICALCLQ6ZW33 695 aa17.47■□□□□ 0.39
NID1-201ENST00000264187 SSFA2P28290 1259 aa17.47■□□□□ 0.39
NID1-201ENST00000264187 ZNF219Q9P2Y4 722 aaPredicted RBP17.47■□□□□ 0.39
NID1-201ENST00000264187 TFIP11Q9UBB9 837 aaKnown RBP17.47■□□□□ 0.39
NID1-201ENST00000264187 IDEP14735 1019 aa17.47■□□□□ 0.39
NID1-201ENST00000264187 MX1P20591 662 aa17.47■□□□□ 0.39
NID1-201ENST00000264187 CTCFLQ8NI51 663 aaPredicted RBP17.47■□□□□ 0.39
NID1-201ENST00000264187 RAB11FIP4Q86YS3 637 aa17.46■□□□□ 0.39
NID1-201ENST00000264187 PPP4R3BQ5MIZ7 849 aa17.46■□□□□ 0.39
NID1-201ENST00000264187 FERMT2Q96AC1 680 aa17.46■□□□□ 0.39
NID1-201ENST00000264187 CCDC8Q9H0W5 538 aaPredicted RBP17.46■□□□□ 0.39
NID1-201ENST00000264187 MCM3P25205 808 aa17.46■□□□□ 0.39
NID1-201ENST00000264187 NLRP5P59047 1200 aa17.46■□□□□ 0.39
NID1-201ENST00000264187 PRDM11Q9NQV5 511 aa17.46■□□□□ 0.39
NID1-201ENST00000264187 CCDC150Q8NCX0 1101 aa17.46■□□□□ 0.39
NID1-201ENST00000264187 IFIT1P09914 478 aaKnown RBP17.46■□□□□ 0.38
NID1-201ENST00000264187 ZC3H6P61129 1189 aaKnown RBP17.46■□□□□ 0.38
NID1-201ENST00000264187 TMEM87AQ8NBN3 555 aa17.46■□□□□ 0.38
NID1-201ENST00000264187 FSD2A1L4K1 749 aa17.45■□□□□ 0.38
NID1-201ENST00000264187 PRC1O43663 620 aa17.45■□□□□ 0.38
NID1-201ENST00000264187 FSIP1Q8NA03 581 aa17.45■□□□□ 0.38
NID1-201ENST00000264187 SLC12A7Q9Y666 1083 aa17.45■□□□□ 0.38
NID1-201ENST00000264187 NACADO15069 1562 aa17.45■□□□□ 0.38
NID1-201ENST00000264187 CCDC40Q4G0X9 1142 aa17.45■□□□□ 0.38
NID1-201ENST00000264187 JADE2Q9NQC1 790 aa17.45■□□□□ 0.38
NID1-201ENST00000264187 ANKIB1Q9P2G1 1089 aa17.45■□□□□ 0.38
NID1-201ENST00000264187 PIP4K2BP78356 416 aa17.45■□□□□ 0.38
NID1-201ENST00000264187 DZIP1Q86YF9 867 aaKnown RBP17.45■□□□□ 0.38
NID1-201ENST00000264187 DDX23Q9BUQ8 820 aaKnown RBP17.45■□□□□ 0.38
NID1-201ENST00000264187 VAT1LQ9HCJ6 419 aa17.45■□□□□ 0.38
NID1-201ENST00000264187 RAB11FIP3O75154 756 aa17.44■□□□□ 0.38
NID1-201ENST00000264187 TMEM266Q2M3C6 531 aa17.44■□□□□ 0.38
NID1-201ENST00000264187 SCAND2PQ9GZW5 306 aaPredicted RBP17.44■□□□□ 0.38
NID1-201ENST00000264187 CCDC194A0A1B0GVG4 234 aa17.44■□□□□ 0.38
NID1-201ENST00000264187 WDR63Q8IWG1 891 aa17.44■□□□□ 0.38
NID1-201ENST00000264187 CALCOCO1Q9P1Z2 691 aa17.44■□□□□ 0.38
NID1-201ENST00000264187 DNAI2Q9GZS0 605 aa17.44■□□□□ 0.38
NID1-201ENST00000264187 MCM10Q7L590 875 aa17.44■□□□□ 0.38
NID1-201ENST00000264187 ZNF444Q8N0Y2 327 aaPredicted RBP17.44■□□□□ 0.38
NID1-201ENST00000264187 PPP1R14CQ8TAE6 165 aa17.44■□□□□ 0.38
NID1-201ENST00000264187 TAOK3Q9H2K8 898 aa17.44■□□□□ 0.38
NID1-201ENST00000264187 CAVIN4Q5BKX8 364 aa17.44■□□□□ 0.38
NID1-201ENST00000264187 MYD88Q99836 296 aa17.44■□□□□ 0.38
NID1-201ENST00000264187 RPAP2Q8IXW5 612 aaPredicted RBP17.43■□□□□ 0.38
NID1-201ENST00000264187 FBF1Q8TES7 1133 aa17.43■□□□□ 0.38
NID1-201ENST00000264187 ALS2CR12Q96Q35 445 aa17.43■□□□□ 0.38
NID1-201ENST00000264187 TTLL12Q14166 644 aaPredicted RBP17.43■□□□□ 0.38
NID1-201ENST00000264187 PAIP2Q9BPZ3 127 aaKnown RBP17.43■□□□□ 0.38
NID1-201ENST00000264187 GOLGA8BA8MQT2 603 aa17.43■□□□□ 0.38
NID1-201ENST00000264187 PAXIP1Q6ZW49 1069 aaPredicted RBP17.43■□□□□ 0.38
NID1-201ENST00000264187 APBB1IPQ7Z5R6 666 aaPredicted RBP17.43■□□□□ 0.38
NID1-201ENST00000264187 WDR70Q9NW82 654 aa17.43■□□□□ 0.38
NID1-201ENST00000264187 SSRP1Q08945 709 aaKnown RBP17.43■□□□□ 0.38
NID1-201ENST00000264187 ZNF287Q9HBT7 754 aa17.43■□□□□ 0.38
NID1-201ENST00000264187 GOLGA8AA7E2F4 631 aa17.42■□□□□ 0.38
NID1-201ENST00000264187 ARL1P40616 181 aaPredicted RBP17.42■□□□□ 0.38
NID1-201ENST00000264187 CUL5Q93034 780 aa17.42■□□□□ 0.38
NID1-201ENST00000264187 KIF1BPQ96EK5 621 aa17.42■□□□□ 0.38
NID1-201ENST00000264187 MYOM3Q5VTT5 1437 aa17.42■□□□□ 0.38
NID1-201ENST00000264187 IFIT3O14879 490 aaKnown RBP17.42■□□□□ 0.38
NID1-201ENST00000264187 FGFR1OPO95684 399 aaKnown RBP17.42■□□□□ 0.38
NID1-201ENST00000264187 FERP16591 822 aa17.42■□□□□ 0.38
NID1-201ENST00000264187 NAA15Q9BXJ9 866 aaKnown RBP17.42■□□□□ 0.38
NID1-201ENST00000264187 RAB34Q9BZG1 259 aa17.42■□□□□ 0.38
NID1-201ENST00000264187 TERF1P54274 439 aa17.41■□□□□ 0.38
NID1-201ENST00000264187 ZNF213O14771 459 aa17.41■□□□□ 0.38
NID1-201ENST00000264187 GLRX3O76003 335 aaKnown RBP17.41■□□□□ 0.38
NID1-201ENST00000264187 SPECC1LQ69YQ0 1117 aa17.41■□□□□ 0.38
NID1-201ENST00000264187 AFAP1Q8N556 730 aa17.41■□□□□ 0.38
NID1-201ENST00000264187 HSP90AA4PQ58FG1 418 aa17.41■□□□□ 0.38
NID1-201ENST00000264187 GIGYF2Q6Y7W6 1299 aaKnown RBP17.41■□□□□ 0.38
NID1-201ENST00000264187 CCDC196A0A1B0GTZ2 297 aa17.41■□□□□ 0.38
NID1-201ENST00000264187 MNAT1P51948 309 aa17.41■□□□□ 0.38
NID1-201ENST00000264187 SNW1Q13573 536 aaKnown RBP17.4■□□□□ 0.38
NID1-201ENST00000264187 CCDC12Q8WUD4 166 aaPredicted RBP17.4■□□□□ 0.38
NID1-201ENST00000264187 RBM27Q9P2N5 1060 aaKnown RBP17.4■□□□□ 0.38
NID1-201ENST00000264187 ADCY5O95622 1261 aa17.4■□□□□ 0.38
NID1-201ENST00000264187 SPATA24Q86W54 205 aa17.4■□□□□ 0.38
NID1-201ENST00000264187 IQCA1Q86XH1 822 aa17.4■□□□□ 0.38
NID1-201ENST00000264187 RGS22Q8NE09 1264 aa17.4■□□□□ 0.38
NID1-201ENST00000264187 DUSP27Q5VZP5 1158 aa17.4■□□□□ 0.38
NID1-201ENST00000264187 AKAP2Q9Y2D5 859 aa17.4■□□□□ 0.38
NID1-201ENST00000264187 MXRA7P84157 204 aa17.39■□□□□ 0.38
NID1-201ENST00000264187 SYCP3Q8IZU3 236 aa17.39■□□□□ 0.38
NID1-201ENST00000264187 SAMM50Q9Y512 469 aa17.39■□□□□ 0.38
NID1-201ENST00000264187 A0A1W2PRG0 241 aa17.39■□□□□ 0.37
NID1-201ENST00000264187 F6X3S4 739 aa17.39■□□□□ 0.37
NID1-201ENST00000264187 ANKRD18BA2A2Z9 1011 aa17.39■□□□□ 0.37
NID1-201ENST00000264187 CEP112Q8N8E3 955 aa17.39■□□□□ 0.37
NID1-201ENST00000264187 IKBKGQ9Y6K9 419 aa17.39■□□□□ 0.37
NID1-201ENST00000264187 GNG11P61952 73 aa17.39■□□□□ 0.37
NID1-201ENST00000264187 C6orf163Q5TEZ5 329 aa17.39■□□□□ 0.37
NID1-201ENST00000264187 PHAXQ9H814 394 aaKnown RBP17.39■□□□□ 0.37
NID1-201ENST00000264187 ANKRD50Q9ULJ7 1429 aa17.39■□□□□ 0.37
NID1-201ENST00000264187 PABPN1LA6NDY0 278 aaKnown RBP17.39■□□□□ 0.37
NID1-201ENST00000264187 CCDC160A6NGH7 325 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms