RNA–Protein interactions for RNA: ENST00000262805.16

PDE4C-201, Transcript of phosphodiesterase 4C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4C, Length 2,472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-201ENST00000262805 RGPD2P0DJD1 1756 aa20.37■□□□□ 0.85
PDE4C-201ENST00000262805 PRIM1P49642 420 aaKnown RBP20.37■□□□□ 0.85
PDE4C-201ENST00000262805 PPP1R9BQ96SB3 815 aa20.37■□□□□ 0.85
PDE4C-201ENST00000262805 RBSNQ9H1K0 784 aa20.37■□□□□ 0.85
PDE4C-201ENST00000262805 ZBTB7CA1YPR0 619 aa20.36■□□□□ 0.85
PDE4C-201ENST00000262805 CUL4AQ13619 759 aa20.36■□□□□ 0.85
PDE4C-201ENST00000262805 SRCIN1Q9C0H9 1055 aa20.36■□□□□ 0.85
PDE4C-201ENST00000262805 BABAM1Q9NWV8 329 aa20.36■□□□□ 0.85
PDE4C-201ENST00000262805 EIF4A1P60842 406 aaKnown RBP20.36■□□□□ 0.85
PDE4C-201ENST00000262805 CCDC173Q0VFZ6 552 aa20.36■□□□□ 0.85
PDE4C-201ENST00000262805 POLA2Q14181 598 aa20.36■□□□□ 0.85
PDE4C-201ENST00000262805 TMEM63CQ9P1W3 806 aa20.36■□□□□ 0.85
PDE4C-201ENST00000262805 MCCP23508 829 aa20.35■□□□□ 0.85
PDE4C-201ENST00000262805 PI4K2BQ8TCG2 481 aa20.35■□□□□ 0.85
PDE4C-201ENST00000262805 SRGAP3O43295 1099 aa20.35■□□□□ 0.85
PDE4C-201ENST00000262805 RHPN1Q8TCX5 695 aa20.35■□□□□ 0.85
PDE4C-201ENST00000262805 PI4KAP2A4QPH2 592 aa20.34■□□□□ 0.85
PDE4C-201ENST00000262805 ANAPC15P60006 121 aa20.34■□□□□ 0.85
PDE4C-201ENST00000262805 PI4KAP1Q8N8J0 262 aa20.34■□□□□ 0.85
PDE4C-201ENST00000262805 LRRC59Q96AG4 307 aaKnown RBP20.34■□□□□ 0.85
PDE4C-201ENST00000262805 PHF8Q9UPP1 1060 aa20.34■□□□□ 0.85
PDE4C-201ENST00000262805 BRD1O95696 1058 aa20.34■□□□□ 0.85
PDE4C-201ENST00000262805 IP6K1Q92551 441 aa20.34■□□□□ 0.85
PDE4C-201ENST00000262805 PLEKHG5O94827 1062 aa20.33■□□□□ 0.85
PDE4C-201ENST00000262805 MED1Q15648 1581 aaPredicted RBP20.33■□□□□ 0.85
PDE4C-201ENST00000262805 AOX1Q06278 1338 aa20.33■□□□□ 0.84
PDE4C-201ENST00000262805 MCM2P49736 904 aa20.33■□□□□ 0.84
PDE4C-201ENST00000262805 BEND3Q5T5X7 828 aa20.33■□□□□ 0.84
PDE4C-201ENST00000262805 FOXD4L6Q3SYB3 417 aaPredicted RBP20.32■□□□□ 0.84
PDE4C-201ENST00000262805 FOXD4L3Q6VB84 417 aaPredicted RBP20.32■□□□□ 0.84
PDE4C-201ENST00000262805 KDM3BQ7LBC6 1761 aa20.32■□□□□ 0.84
PDE4C-201ENST00000262805 NFAT5O94916 1531 aa20.32■□□□□ 0.84
PDE4C-201ENST00000262805 DNAAF4Q8WXU2 420 aa20.31■□□□□ 0.84
PDE4C-201ENST00000262805 SYCE3A1L190 88 aa20.31■□□□□ 0.84
PDE4C-201ENST00000262805 HSPA4P34932 840 aa20.31■□□□□ 0.84
PDE4C-201ENST00000262805 MPRIPQ6WCQ1 1025 aa20.31■□□□□ 0.84
PDE4C-201ENST00000262805 IL17RAQ96F46 866 aa20.31■□□□□ 0.84
PDE4C-201ENST00000262805 RAB11FIP3O75154 756 aa20.3■□□□□ 0.84
PDE4C-201ENST00000262805 ADCY9O60503 1353 aa20.3■□□□□ 0.84
PDE4C-201ENST00000262805 INTS4Q96HW7 963 aaKnown RBP20.29■□□□□ 0.84
PDE4C-201ENST00000262805 LARP6Q9BRS8 491 aaKnown RBP20.29■□□□□ 0.84
PDE4C-201ENST00000262805 TCHHQ07283 1943 aa20.28■□□□□ 0.84
PDE4C-201ENST00000262805 SGSM2O43147 1006 aa20.28■□□□□ 0.84
PDE4C-201ENST00000262805 KIF1BPQ96EK5 621 aa20.28■□□□□ 0.84
PDE4C-201ENST00000262805 GDPD2Q9HCC8 539 aa20.28■□□□□ 0.84
PDE4C-201ENST00000262805 BTBD11A6QL63 1104 aa20.28■□□□□ 0.84
PDE4C-201ENST00000262805 ZNF530Q6P9A1 599 aaPredicted RBP20.28■□□□□ 0.84
PDE4C-201ENST00000262805 ANP32BQ92688 251 aaKnown RBP20.28■□□□□ 0.84
PDE4C-201ENST00000262805 PROSER3Q2NL68 480 aa20.27■□□□□ 0.84
PDE4C-201ENST00000262805 RASEFQ8IZ41 740 aa20.27■□□□□ 0.84
PDE4C-201ENST00000262805 PXDNQ92626 1479 aa20.27■□□□□ 0.84
PDE4C-201ENST00000262805 RAD50Q92878 1312 aa20.27■□□□□ 0.84
PDE4C-201ENST00000262805 PRAMEF22A3QJZ6 481 aa20.27■□□□□ 0.83
PDE4C-201ENST00000262805 LSG1Q9H089 658 aaKnown RBP20.27■□□□□ 0.83
PDE4C-201ENST00000262805 SNX14Q9Y5W7 946 aa20.27■□□□□ 0.83
PDE4C-201ENST00000262805 TEFQ10587 303 aa20.26■□□□□ 0.83
PDE4C-201ENST00000262805 ESCO1Q5FWF5 840 aa20.26■□□□□ 0.83
PDE4C-201ENST00000262805 LRSAM1Q6UWE0 723 aa20.26■□□□□ 0.83
PDE4C-201ENST00000262805 SPG7Q9UQ90 795 aa20.26■□□□□ 0.83
PDE4C-201ENST00000262805 XPCQ01831 940 aaPredicted RBP20.26■□□□□ 0.83
PDE4C-201ENST00000262805 CWC27Q6UX04 472 aaKnown RBP20.26■□□□□ 0.83
PDE4C-201ENST00000262805 LMO7Q8WWI1 1683 aa20.25■□□□□ 0.83
PDE4C-201ENST00000262805 DTNBO60941 627 aa20.25■□□□□ 0.83
PDE4C-201ENST00000262805 PSME1Q06323 249 aa20.25■□□□□ 0.83
PDE4C-201ENST00000262805 ZSCAN30Q86W11 494 aa20.25■□□□□ 0.83
PDE4C-201ENST00000262805 GADD45BO75293 160 aaPredicted RBP20.25■□□□□ 0.83
PDE4C-201ENST00000262805 CPA1P15085 419 aa20.25■□□□□ 0.83
PDE4C-201ENST00000262805 CHD2O14647 1828 aaKnown RBP20.24■□□□□ 0.83
PDE4C-201ENST00000262805 HOXB7P09629 217 aa20.24■□□□□ 0.83
PDE4C-201ENST00000262805 PA2G4Q9UQ80 394 aaKnown RBP20.24■□□□□ 0.83
PDE4C-201ENST00000262805 AKAP4Q5JQC9 854 aa20.24■□□□□ 0.83
PDE4C-201ENST00000262805 ANKLE2Q86XL3 938 aa20.24■□□□□ 0.83
PDE4C-201ENST00000262805 PDLIM2Q96JY6 352 aa20.24■□□□□ 0.83
PDE4C-201ENST00000262805 RPAP1Q9BWH6 1393 aaPredicted RBP20.23■□□□□ 0.83
PDE4C-201ENST00000262805 CRYBG1Q9Y4K1 1723 aa20.23■□□□□ 0.83
PDE4C-201ENST00000262805 CNTROBQ8N137 903 aa20.23■□□□□ 0.83
PDE4C-201ENST00000262805 TTC14Q96N46 770 aa20.23■□□□□ 0.83
PDE4C-201ENST00000262805 MAP3K2Q9Y2U5 619 aa20.23■□□□□ 0.83
PDE4C-201ENST00000262805 OS9Q13438 667 aaPredicted RBP20.22■□□□□ 0.83
PDE4C-201ENST00000262805 CWF19L2Q2TBE0 894 aaKnown RBP20.22■□□□□ 0.83
PDE4C-201ENST00000262805 RNF214Q8ND24 703 aa20.22■□□□□ 0.83
PDE4C-201ENST00000262805 AK2P54819 239 aa20.22■□□□□ 0.83
PDE4C-201ENST00000262805 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.22■□□□□ 0.83
PDE4C-201ENST00000262805 LMTK3Q96Q04 1460 aa20.22■□□□□ 0.83
PDE4C-201ENST00000262805 RNMTO43148 476 aaKnown RBP20.21■□□□□ 0.83
PDE4C-201ENST00000262805 MBD3O95983 291 aa20.21■□□□□ 0.83
PDE4C-201ENST00000262805 RUFY3Q7L099 469 aa20.21■□□□□ 0.83
PDE4C-201ENST00000262805 EPB41L2O43491 1005 aaKnown RBP20.2■□□□□ 0.82
PDE4C-201ENST00000262805 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.2■□□□□ 0.82
PDE4C-201ENST00000262805 DBF4Q9UBU7 674 aaPredicted RBP20.2■□□□□ 0.82
PDE4C-201ENST00000262805 USP42Q9H9J4 1324 aaKnown RBP20.2■□□□□ 0.82
PDE4C-201ENST00000262805 PTH1RQ03431 593 aa20.2■□□□□ 0.82
PDE4C-201ENST00000262805 PLEKHO1Q53GL0 409 aaPredicted RBP20.2■□□□□ 0.82
PDE4C-201ENST00000262805 USP48Q86UV5 1035 aa20.2■□□□□ 0.82
PDE4C-201ENST00000262805 GIGYF1O75420 1035 aaPredicted RBP20.19■□□□□ 0.82
PDE4C-201ENST00000262805 LARGE1O95461 756 aa20.19■□□□□ 0.82
PDE4C-201ENST00000262805 ORAI2Q96SN7 254 aa20.19■□□□□ 0.82
PDE4C-201ENST00000262805 KCNH5Q8NCM2 988 aa20.19■□□□□ 0.82
PDE4C-201ENST00000262805 C9orf78Q9NZ63 289 aaPredicted RBP20.19■□□□□ 0.82
PDE4C-201ENST00000262805 GCP02774 474 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms