RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 DDX49Q9Y6V7 483 aaKnown RBP12.37□□□□□ -0.43
COPB1-201ENST00000249923 ADCY9O60503 1353 aa12.37□□□□□ -0.43
COPB1-201ENST00000249923 MSNP26038 577 aaKnown RBP12.37□□□□□ -0.43
COPB1-201ENST00000249923 NEK4P51957 841 aa12.37□□□□□ -0.43
COPB1-201ENST00000249923 CHPF2Q9P2E5 772 aa12.37□□□□□ -0.43
COPB1-201ENST00000249923 RBM27Q9P2N5 1060 aaKnown RBP12.37□□□□□ -0.43
COPB1-201ENST00000249923 MAP4K4O95819 1239 aaPredicted RBP12.36□□□□□ -0.43
COPB1-201ENST00000249923 PPP1R42Q7Z4L9 355 aa12.36□□□□□ -0.43
COPB1-201ENST00000249923 IL17RAQ96F46 866 aa12.36□□□□□ -0.43
COPB1-201ENST00000249923 ST18O60284 1047 aa12.36□□□□□ -0.43
COPB1-201ENST00000249923 PTMAP06454 111 aaKnown RBP12.36□□□□□ -0.43
COPB1-201ENST00000249923 ZSCAN23Q3MJ62 389 aa12.36□□□□□ -0.43
COPB1-201ENST00000249923 CASC1Q6TDU7 716 aa12.36□□□□□ -0.43
COPB1-201ENST00000249923 CAVIN1Q6NZI2 390 aaKnown RBP12.36□□□□□ -0.43
COPB1-201ENST00000249923 RILPL2Q969X0 211 aa12.36□□□□□ -0.43
COPB1-201ENST00000249923 PRAMEF22A3QJZ6 481 aa12.35□□□□□ -0.43
COPB1-201ENST00000249923 NUCB2P80303 420 aa12.35□□□□□ -0.43
COPB1-201ENST00000249923 BEND3Q5T5X7 828 aa12.35□□□□□ -0.43
COPB1-201ENST00000249923 BCL11BQ9C0K0 894 aaPredicted RBP12.35□□□□□ -0.43
COPB1-201ENST00000249923 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.35□□□□□ -0.43
COPB1-201ENST00000249923 IP6K1Q92551 441 aa12.35□□□□□ -0.43
COPB1-201ENST00000249923 UPF3BQ9BZI7 483 aaKnown RBP12.35□□□□□ -0.43
COPB1-201ENST00000249923 EIF2S2P20042 333 aaKnown RBP12.35□□□□□ -0.43
COPB1-201ENST00000249923 CUL4AQ13619 759 aa12.35□□□□□ -0.43
COPB1-201ENST00000249923 PHF8Q9UPP1 1060 aa12.35□□□□□ -0.43
COPB1-201ENST00000249923 TRIM6-TRIM34B2RNG4 842 aa12.34□□□□□ -0.43
COPB1-201ENST00000249923 GOLGA6L22H0YM25 854 aa12.34□□□□□ -0.43
COPB1-201ENST00000249923 PRPF40AO75400 957 aaKnown RBP12.34□□□□□ -0.43
COPB1-201ENST00000249923 UBTFL1P0CB47 393 aaPredicted RBP12.34□□□□□ -0.43
COPB1-201ENST00000249923 ZNF445P59923 1031 aa12.34□□□□□ -0.43
COPB1-201ENST00000249923 PROSER3Q2NL68 480 aa12.34□□□□□ -0.43
COPB1-201ENST00000249923 ANO2Q9NQ90 1003 aa12.34□□□□□ -0.43
COPB1-201ENST00000249923 TMEM63CQ9P1W3 806 aa12.34□□□□□ -0.43
COPB1-201ENST00000249923 SIPA1L3O60292 1781 aaPredicted RBP12.34□□□□□ -0.43
COPB1-201ENST00000249923 CWC22Q9HCG8 908 aaKnown RBP12.34□□□□□ -0.43
COPB1-201ENST00000249923 BABAM1Q9NWV8 329 aa12.34□□□□□ -0.43
COPB1-201ENST00000249923 PI4KAP2A4QPH2 592 aa12.34□□□□□ -0.43
COPB1-201ENST00000249923 C14orf37Q86TY3 774 aa12.34□□□□□ -0.43
COPB1-201ENST00000249923 PI4KAP1Q8N8J0 262 aa12.34□□□□□ -0.43
COPB1-201ENST00000249923 RBSNQ9H1K0 784 aa12.34□□□□□ -0.43
COPB1-201ENST00000249923 NCAPD2Q15021 1401 aa12.33□□□□□ -0.44
COPB1-201ENST00000249923 ESPNB1AK53 854 aa12.33□□□□□ -0.44
COPB1-201ENST00000249923 PRIM1P49642 420 aaKnown RBP12.33□□□□□ -0.44
COPB1-201ENST00000249923 TCHHQ07283 1943 aa12.33□□□□□ -0.44
COPB1-201ENST00000249923 A0A0U1RQG5 324 aaPredicted RBP12.32□□□□□ -0.44
COPB1-201ENST00000249923 BRD1O95696 1058 aa12.32□□□□□ -0.44
COPB1-201ENST00000249923 MPRIPQ6WCQ1 1025 aa12.32□□□□□ -0.44
COPB1-201ENST00000249923 RHPN1Q8TCX5 695 aa12.32□□□□□ -0.44
COPB1-201ENST00000249923 PPP1R9BQ96SB3 815 aa12.32□□□□□ -0.44
COPB1-201ENST00000249923 COL9A3Q14050 684 aaPredicted RBP12.32□□□□□ -0.44
COPB1-201ENST00000249923 R3HCC1Q9Y3T6 440 aaKnown RBP12.32□□□□□ -0.44
COPB1-201ENST00000249923 CAMTA1Q9Y6Y1 1673 aa12.32□□□□□ -0.44
COPB1-201ENST00000249923 RGPD5Q99666 1765 aa12.32□□□□□ -0.44
COPB1-201ENST00000249923 SRGAP3O43295 1099 aa12.32□□□□□ -0.44
COPB1-201ENST00000249923 DTNBO60941 627 aa12.32□□□□□ -0.44
COPB1-201ENST00000249923 SURF6O75683 361 aaKnown RBP12.32□□□□□ -0.44
COPB1-201ENST00000249923 NASPP49321 788 aaPredicted RBP12.32□□□□□ -0.44
COPB1-201ENST00000249923 RASEFQ8IZ41 740 aa12.32□□□□□ -0.44
COPB1-201ENST00000249923 RNF214Q8ND24 703 aa12.32□□□□□ -0.44
COPB1-201ENST00000249923 PTMSP20962 102 aa12.31□□□□□ -0.44
COPB1-201ENST00000249923 HSPA4P34932 840 aa12.31□□□□□ -0.44
COPB1-201ENST00000249923 XPCQ01831 940 aaPredicted RBP12.31□□□□□ -0.44
COPB1-201ENST00000249923 SRCIN1Q9C0H9 1055 aa12.31□□□□□ -0.44
COPB1-201ENST00000249923 AXIN2Q9Y2T1 843 aa12.31□□□□□ -0.44
COPB1-201ENST00000249923 RPAP1Q9BWH6 1393 aaPredicted RBP12.31□□□□□ -0.44
COPB1-201ENST00000249923 HEG1Q9ULI3 1381 aa12.31□□□□□ -0.44
COPB1-201ENST00000249923 AOX1Q06278 1338 aa12.31□□□□□ -0.44
COPB1-201ENST00000249923 ADAMTS7Q9UKP4 1686 aa12.3□□□□□ -0.44
COPB1-201ENST00000249923 LSG1Q9H089 658 aaKnown RBP12.3□□□□□ -0.44
COPB1-201ENST00000249923 ANAPC15P60006 121 aa12.3□□□□□ -0.44
COPB1-201ENST00000249923 DNAAF4Q8WXU2 420 aa12.3□□□□□ -0.44
COPB1-201ENST00000249923 KAZALD1Q96I82 304 aa12.3□□□□□ -0.44
COPB1-201ENST00000249923 ORAI2Q96SN7 254 aa12.3□□□□□ -0.44
COPB1-201ENST00000249923 LARP6Q9BRS8 491 aaKnown RBP12.3□□□□□ -0.44
COPB1-201ENST00000249923 TRPM3Q9HCF6 1732 aaPredicted RBP12.3□□□□□ -0.44
COPB1-201ENST00000249923 SLIT3O75094 1523 aa12.3□□□□□ -0.44
COPB1-201ENST00000249923 ADGRL3Q9HAR2 1447 aa12.3□□□□□ -0.44
COPB1-201ENST00000249923 SGSM2O43147 1006 aa12.3□□□□□ -0.44
COPB1-201ENST00000249923 C5P01031 1676 aa12.29□□□□□ -0.44
COPB1-201ENST00000249923 ZNF142P52746 1687 aaPredicted RBP12.29□□□□□ -0.44
COPB1-201ENST00000249923 PLEKHG5O94827 1062 aa12.29□□□□□ -0.44
COPB1-201ENST00000249923 KIAA1211Q6ZU35 1233 aa12.29□□□□□ -0.44
COPB1-201ENST00000249923 TTC14Q96N46 770 aa12.29□□□□□ -0.44
COPB1-201ENST00000249923 RAD50Q92878 1312 aa12.29□□□□□ -0.44
COPB1-201ENST00000249923 CPA1P15085 419 aa12.29□□□□□ -0.44
COPB1-201ENST00000249923 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.29□□□□□ -0.44
COPB1-201ENST00000249923 ESCO1Q5FWF5 840 aa12.28□□□□□ -0.44
COPB1-201ENST00000249923 GDPD2Q9HCC8 539 aa12.28□□□□□ -0.44
COPB1-201ENST00000249923 SNX14Q9Y5W7 946 aa12.28□□□□□ -0.44
COPB1-201ENST00000249923 BTBD11A6QL63 1104 aa12.28□□□□□ -0.44
COPB1-201ENST00000249923 CWF19L2Q2TBE0 894 aaKnown RBP12.28□□□□□ -0.44
COPB1-201ENST00000249923 ZNF530Q6P9A1 599 aaPredicted RBP12.28□□□□□ -0.44
COPB1-201ENST00000249923 PA2G4Q9UQ80 394 aaKnown RBP12.28□□□□□ -0.44
COPB1-201ENST00000249923 SYCE3A1L190 88 aa12.28□□□□□ -0.44
COPB1-201ENST00000249923 GADD45BO75293 160 aaPredicted RBP12.28□□□□□ -0.44
COPB1-201ENST00000249923 PRDM10Q9NQV6 1147 aa12.28□□□□□ -0.44
COPB1-201ENST00000249923 USP42Q9H9J4 1324 aaKnown RBP12.28□□□□□ -0.44
COPB1-201ENST00000249923 LARGE1O95461 756 aa12.27□□□□□ -0.44
COPB1-201ENST00000249923 AKAP4Q5JQC9 854 aa12.27□□□□□ -0.44
COPB1-201ENST00000249923 ARHGEF25Q86VW2 580 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms