RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 KCPQ6ZWJ8 1503 aa29.35■■■□□ 2.29
SYNGR3-201ENST00000248121 FNBP4Q8N3X1 1017 aaPredicted RBP29.35■■■□□ 2.29
SYNGR3-201ENST00000248121 THRAP3Q9Y2W1 955 aaKnown RBP29.35■■■□□ 2.29
SYNGR3-201ENST00000248121 EXOC5O00471 708 aa29.35■■■□□ 2.29
SYNGR3-201ENST00000248121 PROSER3Q2NL68 480 aa29.35■■■□□ 2.29
SYNGR3-201ENST00000248121 IPO9Q96P70 1041 aaKnown RBP29.35■■■□□ 2.29
SYNGR3-201ENST00000248121 NUCB1Q02818 461 aa29.34■■■□□ 2.29
SYNGR3-201ENST00000248121 LAMB4A4D0S4 1761 aa29.33■■■□□ 2.29
SYNGR3-201ENST00000248121 ATP10DQ9P241 1426 aa29.33■■■□□ 2.29
SYNGR3-201ENST00000248121 TTC5Q8N0Z6 440 aa29.33■■■□□ 2.29
SYNGR3-201ENST00000248121 MEIS3Q99687 375 aa29.32■■■□□ 2.28
SYNGR3-201ENST00000248121 N4BP2Q86UW6 1770 aaPredicted RBP29.31■■■□□ 2.28
SYNGR3-201ENST00000248121 VPS72Q15906 364 aa29.31■■■□□ 2.28
SYNGR3-201ENST00000248121 FAM98CQ17RN3 349 aaKnown RBP29.31■■■□□ 2.28
SYNGR3-201ENST00000248121 FKBP5Q13451 457 aaPredicted RBP29.3■■■□□ 2.28
SYNGR3-201ENST00000248121 DDB1Q16531 1140 aa29.3■■■□□ 2.28
SYNGR3-201ENST00000248121 USP21Q9UK80 565 aa29.3■■■□□ 2.28
SYNGR3-201ENST00000248121 BARGINQ6ZT62 677 aa29.3■■■□□ 2.28
SYNGR3-201ENST00000248121 GCC1Q96CN9 775 aa29.3■■■□□ 2.28
SYNGR3-201ENST00000248121 SLC4A10Q6U841 1118 aa29.29■■■□□ 2.28
SYNGR3-201ENST00000248121 MEX3CQ5U5Q3 659 aaKnown RBP29.29■■■□□ 2.28
SYNGR3-201ENST00000248121 USP16Q9Y5T5 823 aa29.29■■■□□ 2.28
SYNGR3-201ENST00000248121 CCT4P50991 539 aaKnown RBP29.28■■■□□ 2.28
SYNGR3-201ENST00000248121 PIGBQ92521 554 aa29.28■■■□□ 2.28
SYNGR3-201ENST00000248121 FMNL2Q96PY5 1086 aa29.28■■■□□ 2.28
SYNGR3-201ENST00000248121 CHD1LQ86WJ1 897 aa29.27■■■□□ 2.28
SYNGR3-201ENST00000248121 MARCH10Q8NA82 808 aaPredicted RBP29.27■■■□□ 2.28
SYNGR3-201ENST00000248121 CDCA7Q9BWT1 371 aaPredicted RBP29.27■■■□□ 2.28
SYNGR3-201ENST00000248121 TMOD3Q9NYL9 352 aa29.27■■■□□ 2.28
SYNGR3-201ENST00000248121 PIP4K2AP48426 406 aaPredicted RBP29.27■■■□□ 2.28
SYNGR3-201ENST00000248121 PDIA6Q15084 440 aa29.27■■■□□ 2.28
SYNGR3-201ENST00000248121 LNPKQ9C0E8 428 aa29.27■■■□□ 2.28
SYNGR3-201ENST00000248121 ANKRD44Q8N8A2 993 aa29.25■■■□□ 2.27
SYNGR3-201ENST00000248121 PTCD1O75127 700 aaKnown RBP29.25■■■□□ 2.27
SYNGR3-201ENST00000248121 SEC24BO95487 1268 aa29.25■■■□□ 2.27
SYNGR3-201ENST00000248121 CEP85Q6P2H3 762 aa29.25■■■□□ 2.27
SYNGR3-201ENST00000248121 DBF4Q9UBU7 674 aaPredicted RBP29.25■■■□□ 2.27
SYNGR3-201ENST00000248121 ASAP1Q9ULH1 1129 aa29.25■■■□□ 2.27
SYNGR3-201ENST00000248121 AFF2P51816 1311 aa29.24■■■□□ 2.27
SYNGR3-201ENST00000248121 SNRPA1P09661 255 aaKnown RBP29.24■■■□□ 2.27
SYNGR3-201ENST00000248121 BCL9O00512 1426 aa29.23■■■□□ 2.27
SYNGR3-201ENST00000248121 ANKRD45Q5TZF3 282 aa29.22■■■□□ 2.27
SYNGR3-201ENST00000248121 RPAP2Q8IXW5 612 aaPredicted RBP29.22■■■□□ 2.27
SYNGR3-201ENST00000248121 THSD7AQ9UPZ6 1657 aa29.22■■■□□ 2.27
SYNGR3-201ENST00000248121 ADCY9O60503 1353 aa29.21■■■□□ 2.27
SYNGR3-201ENST00000248121 SYTL4Q96C24 671 aaPredicted RBP29.21■■■□□ 2.27
SYNGR3-201ENST00000248121 DCTPP1Q9H773 170 aa29.21■■■□□ 2.27
SYNGR3-201ENST00000248121 NOP58Q9Y2X3 529 aaKnown RBP29.21■■■□□ 2.27
SYNGR3-201ENST00000248121 PXDNLA1KZ92 1463 aa29.21■■■□□ 2.27
SYNGR3-201ENST00000248121 ATG3Q9NT62 314 aa29.21■■■□□ 2.27
SYNGR3-201ENST00000248121 ACSBG1Q96GR2 724 aa29.2■■■□□ 2.26
SYNGR3-201ENST00000248121 MYL6BP14649 208 aa29.19■■■□□ 2.26
SYNGR3-201ENST00000248121 PRIM1P49642 420 aaKnown RBP29.19■■■□□ 2.26
SYNGR3-201ENST00000248121 DDX21Q9NR30 783 aaKnown RBP eCLIP29.19■■■□□ 2.26
SYNGR3-201ENST00000248121 PI4KAP2A4QPH2 592 aa29.17■■■□□ 2.26
SYNGR3-201ENST00000248121 LRP10Q7Z4F1 713 aa29.17■■■□□ 2.26
SYNGR3-201ENST00000248121 PI4KAP1Q8N8J0 262 aa29.17■■■□□ 2.26
SYNGR3-201ENST00000248121 AIMP1Q12904 312 aaKnown RBP29.16■■■□□ 2.26
SYNGR3-201ENST00000248121 A0A0G2JS52 829 aa29.15■■■□□ 2.26
SYNGR3-201ENST00000248121 MYT1Q01538 1121 aa29.15■■■□□ 2.26
SYNGR3-201ENST00000248121 CHMP4AQ9BY43 222 aa29.15■■■□□ 2.26
SYNGR3-201ENST00000248121 ATRNO75882 1429 aa29.14■■■□□ 2.26
SYNGR3-201ENST00000248121 HYPKQ9NX55 129 aa29.14■■■□□ 2.26
SYNGR3-201ENST00000248121 ZBTB47Q9UFB7 747 aaPredicted RBP29.14■■■□□ 2.26
SYNGR3-201ENST00000248121 SLC4A9Q96Q91 983 aa29.13■■■□□ 2.25
SYNGR3-201ENST00000248121 NBPF26B4DH59 902 aa29.13■■■□□ 2.25
SYNGR3-201ENST00000248121 NBPF14Q5TI25 921 aa29.13■■■□□ 2.25
SYNGR3-201ENST00000248121 NBPF10Q6P3W6 841 aaKnown RBP29.13■■■□□ 2.25
SYNGR3-201ENST00000248121 NBPF15Q8N660 670 aa29.13■■■□□ 2.25
SYNGR3-201ENST00000248121 TJP1Q07157 1748 aa29.12■■■□□ 2.25
SYNGR3-201ENST00000248121 GNAI2P04899 355 aa29.12■■■□□ 2.25
SYNGR3-201ENST00000248121 DNAAF4Q8WXU2 420 aa29.12■■■□□ 2.25
SYNGR3-201ENST00000248121 GJD4Q96KN9 370 aaPredicted RBP29.12■■■□□ 2.25
SYNGR3-201ENST00000248121 XAGE3Q8WTP9 111 aa29.11■■■□□ 2.25
SYNGR3-201ENST00000248121 USP44Q9H0E7 712 aa29.11■■■□□ 2.25
SYNGR3-201ENST00000248121 MAP3K2Q9Y2U5 619 aa29.11■■■□□ 2.25
SYNGR3-201ENST00000248121 A1BGP04217 495 aa29.11■■■□□ 2.25
SYNGR3-201ENST00000248121 RBM42Q9BTD8 480 aaKnown RBP29.11■■■□□ 2.25
SYNGR3-201ENST00000248121 ARFGEF2Q9Y6D5 1785 aa29.1■■■□□ 2.25
SYNGR3-201ENST00000248121 KCNQ2O43526 872 aa29.1■■■□□ 2.25
SYNGR3-201ENST00000248121 ANP32EQ9BTT0 268 aa29.1■■■□□ 2.25
SYNGR3-201ENST00000248121 GNAI3P08754 354 aa29.09■■■□□ 2.25
SYNGR3-201ENST00000248121 FAM182BQ5T319 152 aa29.09■■■□□ 2.25
SYNGR3-201ENST00000248121 BEND3Q5T5X7 828 aa29.09■■■□□ 2.25
SYNGR3-201ENST00000248121 ERICH6Q7L0X2 663 aa29.09■■■□□ 2.25
SYNGR3-201ENST00000248121 COPS6Q7L5N1 327 aa29.09■■■□□ 2.25
SYNGR3-201ENST00000248121 DNAJC10Q8IXB1 793 aa29.09■■■□□ 2.25
SYNGR3-201ENST00000248121 KSR2Q6VAB6 950 aa29.08■■■□□ 2.25
SYNGR3-201ENST00000248121 DDRGK1Q96HY6 314 aa29.07■■■□□ 2.24
SYNGR3-201ENST00000248121 BMP2KLQ5H9B9 411 aa29.06■■■□□ 2.24
SYNGR3-201ENST00000248121 PTF1AQ7RTS3 328 aa29.06■■■□□ 2.24
SYNGR3-201ENST00000248121 SRCIN1Q9C0H9 1055 aa29.06■■■□□ 2.24
SYNGR3-201ENST00000248121 NUP188Q5SRE5 1749 aa29.05■■■□□ 2.24
SYNGR3-201ENST00000248121 HMMRO75330 724 aa29.05■■■□□ 2.24
SYNGR3-201ENST00000248121 TRPC5Q9UL62 973 aaPredicted RBP29.05■■■□□ 2.24
SYNGR3-201ENST00000248121 LRRFIP2Q9Y608 721 aaKnown RBP29.05■■■□□ 2.24
SYNGR3-201ENST00000248121 CWF19L2Q2TBE0 894 aaKnown RBP29.04■■■□□ 2.24
SYNGR3-201ENST00000248121 PLEKHM2Q8IWE5 1019 aa29.03■■■□□ 2.24
SYNGR3-201ENST00000248121 C16orf71Q8IYS4 520 aaPredicted RBP29.03■■■□□ 2.24
SYNGR3-201ENST00000248121 AFDNP55196 1824 aaKnown RBP29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms