RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 ORAI2Q96SN7 254 aa20.52■□□□□ 0.88
SSPN-201ENST00000242729 PA2G4Q9UQ80 394 aaKnown RBP20.52■□□□□ 0.88
SSPN-201ENST00000242729 FMN2Q9NZ56 1722 aa20.52■□□□□ 0.88
SSPN-201ENST00000242729 CWC27Q6UX04 472 aaKnown RBP20.51■□□□□ 0.87
SSPN-201ENST00000242729 EIF4A1P60842 406 aaKnown RBP20.51■□□□□ 0.87
SSPN-201ENST00000242729 PRIM1P49642 420 aaKnown RBP20.51■□□□□ 0.87
SSPN-201ENST00000242729 RNF214Q8ND24 703 aa20.51■□□□□ 0.87
SSPN-201ENST00000242729 RHPN1Q8TCX5 695 aa20.51■□□□□ 0.87
SSPN-201ENST00000242729 CWF19L2Q2TBE0 894 aaKnown RBP20.5■□□□□ 0.87
SSPN-201ENST00000242729 SYCE3A1L190 88 aa20.5■□□□□ 0.87
SSPN-201ENST00000242729 HTATSF1O43719 755 aaKnown RBP20.49■□□□□ 0.87
SSPN-201ENST00000242729 RBSNQ9H1K0 784 aa20.49■□□□□ 0.87
SSPN-201ENST00000242729 MCCP23508 829 aa20.49■□□□□ 0.87
SSPN-201ENST00000242729 DNAAF4Q8WXU2 420 aa20.48■□□□□ 0.87
SSPN-201ENST00000242729 CWC22Q9HCG8 908 aaKnown RBP20.48■□□□□ 0.87
SSPN-201ENST00000242729 TMEM63CQ9P1W3 806 aa20.48■□□□□ 0.87
SSPN-201ENST00000242729 PIP4K2AP48426 406 aaPredicted RBP20.47■□□□□ 0.87
SSPN-201ENST00000242729 SSH3Q8TE77 659 aa20.47■□□□□ 0.87
SSPN-201ENST00000242729 IP6K1Q92551 441 aa20.47■□□□□ 0.87
SSPN-201ENST00000242729 JARID2Q92833 1246 aaPredicted RBP20.47■□□□□ 0.87
SSPN-201ENST00000242729 NWD1Q149M9 1564 aa20.47■□□□□ 0.87
SSPN-201ENST00000242729 BEND3Q5T5X7 828 aa20.46■□□□□ 0.87
SSPN-201ENST00000242729 CLEC17AQ6ZS10 378 aa20.46■□□□□ 0.87
SSPN-201ENST00000242729 MPNDQ8N594 471 aa20.46■□□□□ 0.87
SSPN-201ENST00000242729 MAP3K2Q9Y2U5 619 aa20.46■□□□□ 0.87
SSPN-201ENST00000242729 CLCN1P35523 988 aa20.46■□□□□ 0.87
SSPN-201ENST00000242729 RASEFQ8IZ41 740 aa20.46■□□□□ 0.87
SSPN-201ENST00000242729 C9orf78Q9NZ63 289 aaPredicted RBP20.46■□□□□ 0.87
SSPN-201ENST00000242729 PI4K2BQ8TCG2 481 aa20.45■□□□□ 0.86
SSPN-201ENST00000242729 SIL1Q9H173 461 aa20.45■□□□□ 0.86
SSPN-201ENST00000242729 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.45■□□□□ 0.86
SSPN-201ENST00000242729 PTMSP20962 102 aa20.45■□□□□ 0.86
SSPN-201ENST00000242729 ZC3H6P61129 1189 aaKnown RBP20.44■□□□□ 0.86
SSPN-201ENST00000242729 SLC39A6Q13433 755 aa20.44■□□□□ 0.86
SSPN-201ENST00000242729 KLHDC4Q8TBB5 520 aa20.44■□□□□ 0.86
SSPN-201ENST00000242729 STAP2Q9UGK3 403 aa20.44■□□□□ 0.86
SSPN-201ENST00000242729 AXIN2Q9Y2T1 843 aa20.44■□□□□ 0.86
SSPN-201ENST00000242729 GADD45BO75293 160 aaPredicted RBP20.43■□□□□ 0.86
SSPN-201ENST00000242729 ANP32BQ92688 251 aaKnown RBP20.43■□□□□ 0.86
SSPN-201ENST00000242729 DDX17Q92841 729 aaKnown RBP20.42■□□□□ 0.86
SSPN-201ENST00000242729 MYL6BP14649 208 aa20.42■□□□□ 0.86
SSPN-201ENST00000242729 C1orf141Q5JVX7 400 aa20.42■□□□□ 0.86
SSPN-201ENST00000242729 ARHGAP23Q9P227 1491 aa20.41■□□□□ 0.86
SSPN-201ENST00000242729 GCP02774 474 aa20.41■□□□□ 0.86
SSPN-201ENST00000242729 KIF1BPQ96EK5 621 aa20.41■□□□□ 0.86
SSPN-201ENST00000242729 ISY1Q9ULR0 285 aaKnown RBP20.41■□□□□ 0.86
SSPN-201ENST00000242729 FAM208AQ9UK61 1670 aaKnown RBP20.41■□□□□ 0.86
SSPN-201ENST00000242729 XRN1Q8IZH2 1706 aaKnown RBP20.41■□□□□ 0.86
SSPN-201ENST00000242729 SLIT1O75093 1534 aa20.41■□□□□ 0.86
SSPN-201ENST00000242729 POLA2Q14181 598 aa20.4■□□□□ 0.86
SSPN-201ENST00000242729 ADCY9O60503 1353 aa20.4■□□□□ 0.86
SSPN-201ENST00000242729 CCDC9Q9Y3X0 531 aaKnown RBP20.4■□□□□ 0.86
SSPN-201ENST00000242729 COL9A3Q14050 684 aaPredicted RBP20.4■□□□□ 0.86
SSPN-201ENST00000242729 ANKRD24Q8TF21 1146 aa20.4■□□□□ 0.86
SSPN-201ENST00000242729 CCDC8Q9H0W5 538 aaPredicted RBP20.4■□□□□ 0.86
SSPN-201ENST00000242729 SNX14Q9Y5W7 946 aa20.4■□□□□ 0.86
SSPN-201ENST00000242729 PTH1RQ03431 593 aa20.39■□□□□ 0.85
SSPN-201ENST00000242729 BRD1O95696 1058 aa20.39■□□□□ 0.85
SSPN-201ENST00000242729 ANKLE2Q86XL3 938 aa20.39■□□□□ 0.85
SSPN-201ENST00000242729 RNMTO43148 476 aaKnown RBP20.38■□□□□ 0.85
SSPN-201ENST00000242729 HSPA4P34932 840 aa20.38■□□□□ 0.85
SSPN-201ENST00000242729 AK2P54819 239 aa20.38■□□□□ 0.85
SSPN-201ENST00000242729 PLEKHO1Q53GL0 409 aaPredicted RBP20.38■□□□□ 0.85
SSPN-201ENST00000242729 KIAA1211Q6ZU35 1233 aa20.38■□□□□ 0.85
SSPN-201ENST00000242729 PXDNQ92626 1479 aa20.38■□□□□ 0.85
SSPN-201ENST00000242729 CEMIPQ8WUJ3 1361 aa20.38■□□□□ 0.85
SSPN-201ENST00000242729 SGSM2O43147 1006 aa20.38■□□□□ 0.85
SSPN-201ENST00000242729 LARGE1O95461 756 aa20.38■□□□□ 0.85
SSPN-201ENST00000242729 CASTP20810 708 aaKnown RBP20.38■□□□□ 0.85
SSPN-201ENST00000242729 CNTROBQ8N137 903 aa20.38■□□□□ 0.85
SSPN-201ENST00000242729 TCEANC2Q96MN5 208 aa20.38■□□□□ 0.85
SSPN-201ENST00000242729 ZNF445P59923 1031 aa20.37■□□□□ 0.85
SSPN-201ENST00000242729 CCDC173Q0VFZ6 552 aa20.37■□□□□ 0.85
SSPN-201ENST00000242729 ADCK5Q3MIX3 580 aa20.37■□□□□ 0.85
SSPN-201ENST00000242729 AACSQ86V21 672 aa20.37■□□□□ 0.85
SSPN-201ENST00000242729 DIAPH3Q9NSV4 1193 aa20.37■□□□□ 0.85
SSPN-201ENST00000242729 AKAP4Q5JQC9 854 aa20.37■□□□□ 0.85
SSPN-201ENST00000242729 PRPF40BQ6NWY9 871 aaKnown RBP20.37■□□□□ 0.85
SSPN-201ENST00000242729 TLR7Q9NYK1 1049 aaKnown RBP20.37■□□□□ 0.85
SSPN-201ENST00000242729 RAB11FIP3O75154 756 aa20.36■□□□□ 0.85
SSPN-201ENST00000242729 CUL4AQ13619 759 aa20.36■□□□□ 0.85
SSPN-201ENST00000242729 NDUFB9Q9Y6M9 179 aa20.36■□□□□ 0.85
SSPN-201ENST00000242729 LSG1Q9H089 658 aaKnown RBP20.36■□□□□ 0.85
SSPN-201ENST00000242729 DBF4Q9UBU7 674 aaPredicted RBP20.36■□□□□ 0.85
SSPN-201ENST00000242729 GIGYF1O75420 1035 aaPredicted RBP20.35■□□□□ 0.85
SSPN-201ENST00000242729 IFIT2P09913 472 aaKnown RBP20.35■□□□□ 0.85
SSPN-201ENST00000242729 USP48Q86UV5 1035 aa20.35■□□□□ 0.85
SSPN-201ENST00000242729 CLASRPQ8N2M8 674 aaKnown RBP20.35■□□□□ 0.85
SSPN-201ENST00000242729 RGPD2P0DJD1 1756 aa20.35■□□□□ 0.85
SSPN-201ENST00000242729 CNPY2Q9Y2B0 182 aa20.35■□□□□ 0.85
SSPN-201ENST00000242729 ANKARQ7Z5J8 1434 aa20.35■□□□□ 0.85
SSPN-201ENST00000242729 MARF1Q9Y4F3 1742 aaKnown RBP20.35■□□□□ 0.85
SSPN-201ENST00000242729 RUFY3Q7L099 469 aa20.34■□□□□ 0.85
SSPN-201ENST00000242729 FAM227BQ96M60 508 aa20.34■□□□□ 0.85
SSPN-201ENST00000242729 CCDC83Q8IWF9 413 aa20.34■□□□□ 0.85
SSPN-201ENST00000242729 CABLES1Q8TDN4 633 aa20.34■□□□□ 0.85
SSPN-201ENST00000242729 EDC3Q96F86 508 aaKnown RBP20.34■□□□□ 0.85
SSPN-201ENST00000242729 SUCLG2Q96I99 432 aa20.34■□□□□ 0.85
SSPN-201ENST00000242729 ANAPC15P60006 121 aa20.34■□□□□ 0.85
SSPN-201ENST00000242729 JAKMIP1Q96N16 626 aaKnown RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms