RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 GDPD2Q9HCC8 539 aa18.02■□□□□ 0.47
UBE2D4-201ENST00000222402 USP44Q9H0E7 712 aa18.01■□□□□ 0.47
UBE2D4-201ENST00000222402 CDC42BPGQ6DT37 1551 aa18.01■□□□□ 0.47
UBE2D4-201ENST00000222402 PKP1Q13835 747 aa18.01■□□□□ 0.47
UBE2D4-201ENST00000222402 ANKRD24Q8TF21 1146 aa18.01■□□□□ 0.47
UBE2D4-201ENST00000222402 RRAGDQ9NQL2 400 aaPredicted RBP18.01■□□□□ 0.47
UBE2D4-201ENST00000222402 WDR33Q9C0J8 1336 aaKnown RBP18.01■□□□□ 0.47
UBE2D4-201ENST00000222402 FIBPO43427 364 aa18.01■□□□□ 0.47
UBE2D4-201ENST00000222402 CASTP20810 708 aaKnown RBP18■□□□□ 0.47
UBE2D4-201ENST00000222402 JAKMIP1Q96N16 626 aaKnown RBP18■□□□□ 0.47
UBE2D4-201ENST00000222402 NBPF7P0C2Y1 421 aaPredicted RBP18■□□□□ 0.47
UBE2D4-201ENST00000222402 TATP17735 454 aaPredicted RBP18■□□□□ 0.47
UBE2D4-201ENST00000222402 CSPP1Q1MSJ5 1256 aa18■□□□□ 0.47
UBE2D4-201ENST00000222402 KIF20BQ96Q89 1820 aa17.99■□□□□ 0.47
UBE2D4-201ENST00000222402 RNF20Q5VTR2 975 aa17.99■□□□□ 0.47
UBE2D4-201ENST00000222402 CCDC8Q9H0W5 538 aaPredicted RBP17.99■□□□□ 0.47
UBE2D4-201ENST00000222402 KCNQ3O43525 872 aa17.99■□□□□ 0.47
UBE2D4-201ENST00000222402 GLIPR1L2Q4G1C9 344 aa17.99■□□□□ 0.47
UBE2D4-201ENST00000222402 AKAP4Q5JQC9 854 aa17.99■□□□□ 0.47
UBE2D4-201ENST00000222402 PRPF40BQ6NWY9 871 aaKnown RBP17.98■□□□□ 0.47
UBE2D4-201ENST00000222402 PA2G4Q9UQ80 394 aaKnown RBP17.98■□□□□ 0.47
UBE2D4-201ENST00000222402 ZSCAN23Q3MJ62 389 aa17.98■□□□□ 0.47
UBE2D4-201ENST00000222402 CYP46A1Q9Y6A2 500 aa17.98■□□□□ 0.47
UBE2D4-201ENST00000222402 SPATA31D1Q6ZQQ2 1576 aa17.98■□□□□ 0.47
UBE2D4-201ENST00000222402 GCP02774 474 aa17.98■□□□□ 0.47
UBE2D4-201ENST00000222402 CWF19L2Q2TBE0 894 aaKnown RBP17.97■□□□□ 0.47
UBE2D4-201ENST00000222402 GORABQ5T7V8 394 aa17.97■□□□□ 0.47
UBE2D4-201ENST00000222402 FSD2A1L4K1 749 aa17.97■□□□□ 0.47
UBE2D4-201ENST00000222402 BOLA2Q9H3K6 86 aa17.97■□□□□ 0.47
UBE2D4-201ENST00000222402 ANAPC15P60006 121 aa17.97■□□□□ 0.47
UBE2D4-201ENST00000222402 GAS2L3Q86XJ1 694 aa17.97■□□□□ 0.47
UBE2D4-201ENST00000222402 ECHDC1Q9NTX5 307 aa17.97■□□□□ 0.47
UBE2D4-201ENST00000222402 ADAMTS13Q76LX8 1427 aa17.96■□□□□ 0.47
UBE2D4-201ENST00000222402 SLC39A6Q13433 755 aa17.96■□□□□ 0.47
UBE2D4-201ENST00000222402 KRT28Q7Z3Y7 464 aa17.96■□□□□ 0.47
UBE2D4-201ENST00000222402 ORAI2Q96SN7 254 aa17.96■□□□□ 0.47
UBE2D4-201ENST00000222402 KIAA2012Q0VF49 1180 aa17.96■□□□□ 0.47
UBE2D4-201ENST00000222402 NEUROD6Q96NK8 337 aa17.96■□□□□ 0.47
UBE2D4-201ENST00000222402 DNAJC2Q99543 621 aaKnown RBP17.96■□□□□ 0.47
UBE2D4-201ENST00000222402 PDRG1Q9NUG6 133 aa17.96■□□□□ 0.47
UBE2D4-201ENST00000222402 PALD1Q9ULE6 856 aa17.96■□□□□ 0.47
UBE2D4-201ENST00000222402 OVOS2A0A0J9YW53 1432 aa17.96■□□□□ 0.47
UBE2D4-201ENST00000222402 OVOS2Q6IE36 1432 aa17.96■□□□□ 0.47
UBE2D4-201ENST00000222402 EIF4A1P60842 406 aaKnown RBP17.96■□□□□ 0.46
UBE2D4-201ENST00000222402 CCDC83Q8IWF9 413 aa17.96■□□□□ 0.46
UBE2D4-201ENST00000222402 CHAMP1Q96JM3 812 aa17.96■□□□□ 0.46
UBE2D4-201ENST00000222402 DIP2BQ9P265 1576 aa17.95■□□□□ 0.46
UBE2D4-201ENST00000222402 TSPY26PQ9H489 355 aa17.95■□□□□ 0.46
UBE2D4-201ENST00000222402 BABAM1Q9NWV8 329 aa17.95■□□□□ 0.46
UBE2D4-201ENST00000222402 HYPKQ9NX55 129 aa17.95■□□□□ 0.46
UBE2D4-201ENST00000222402 UNC5CLQ8IV45 518 aa17.94■□□□□ 0.46
UBE2D4-201ENST00000222402 MPNDQ8N594 471 aa17.94■□□□□ 0.46
UBE2D4-201ENST00000222402 JARID2Q92833 1246 aaPredicted RBP17.94■□□□□ 0.46
UBE2D4-201ENST00000222402 OSBPL3Q9H4L5 887 aa17.94■□□□□ 0.46
UBE2D4-201ENST00000222402 CRB1P82279 1406 aa17.94■□□□□ 0.46
UBE2D4-201ENST00000222402 MYD88Q99836 296 aa17.94■□□□□ 0.46
UBE2D4-201ENST00000222402 TAF7LQ5H9L4 462 aa17.93■□□□□ 0.46
UBE2D4-201ENST00000222402 LIMCH1Q9UPQ0 1083 aa17.93■□□□□ 0.46
UBE2D4-201ENST00000222402 USP31Q70CQ4 1352 aa17.93■□□□□ 0.46
UBE2D4-201ENST00000222402 TECPR2O15040 1411 aa17.93■□□□□ 0.46
UBE2D4-201ENST00000222402 HIP1O00291 1037 aa17.93■□□□□ 0.46
UBE2D4-201ENST00000222402 PSMA5P28066 241 aa17.93■□□□□ 0.46
UBE2D4-201ENST00000222402 KSR2Q6VAB6 950 aa17.93■□□□□ 0.46
UBE2D4-201ENST00000222402 RNMTO43148 476 aaKnown RBP17.93■□□□□ 0.46
UBE2D4-201ENST00000222402 LARP1Q6PKG0 1096 aaKnown RBP17.93■□□□□ 0.46
UBE2D4-201ENST00000222402 SSH3Q8TE77 659 aa17.93■□□□□ 0.46
UBE2D4-201ENST00000222402 IBTKQ9P2D0 1353 aaPredicted RBP17.93■□□□□ 0.46
UBE2D4-201ENST00000222402 ATP10DQ9P241 1426 aa17.93■□□□□ 0.46
UBE2D4-201ENST00000222402 H3BQV1 296 aa17.92■□□□□ 0.46
UBE2D4-201ENST00000222402 IFFO2Q5TF58 517 aa17.92■□□□□ 0.46
UBE2D4-201ENST00000222402 STK3Q13188 491 aa17.92■□□□□ 0.46
UBE2D4-201ENST00000222402 RIMBP3CA6NJZ7 1639 aa17.92■□□□□ 0.46
UBE2D4-201ENST00000222402 RIMBP3BA6NNM3 1639 aa17.92■□□□□ 0.46
UBE2D4-201ENST00000222402 RIMBP3Q9UFD9 1639 aa17.92■□□□□ 0.46
UBE2D4-201ENST00000222402 PRIM1P49642 420 aaKnown RBP17.92■□□□□ 0.46
UBE2D4-201ENST00000222402 DRC7Q8IY82 874 aa17.92■□□□□ 0.46
UBE2D4-201ENST00000222402 PIP4K2AP48426 406 aaPredicted RBP17.91■□□□□ 0.46
UBE2D4-201ENST00000222402 FAM184AQ8NB25 1140 aa17.91■□□□□ 0.46
UBE2D4-201ENST00000222402 LMBRD1Q9NUN5 540 aa17.91■□□□□ 0.46
UBE2D4-201ENST00000222402 CABP4P57796 275 aa17.91■□□□□ 0.46
UBE2D4-201ENST00000222402 CPA1P15085 419 aa17.91■□□□□ 0.46
UBE2D4-201ENST00000222402 ZRSR1Q15695 479 aaKnown RBP17.91■□□□□ 0.46
UBE2D4-201ENST00000222402 SETD1BQ9UPS6 1966 aaKnown RBP17.91■□□□□ 0.46
UBE2D4-201ENST00000222402 GRM8O00222 908 aa17.9■□□□□ 0.46
UBE2D4-201ENST00000222402 ZSCAN30Q86W11 494 aa17.9■□□□□ 0.46
UBE2D4-201ENST00000222402 CLCN1P35523 988 aa17.9■□□□□ 0.46
UBE2D4-201ENST00000222402 BLOC1S2Q6QNY1 142 aa17.9■□□□□ 0.46
UBE2D4-201ENST00000222402 ALDH1L1O75891 902 aa17.9■□□□□ 0.46
UBE2D4-201ENST00000222402 FOSBP53539 338 aa17.9■□□□□ 0.46
UBE2D4-201ENST00000222402 DTNBO60941 627 aa17.89■□□□□ 0.46
UBE2D4-201ENST00000222402 FERMT3Q86UX7 667 aa17.89■□□□□ 0.46
UBE2D4-201ENST00000222402 CHRNA2Q15822 529 aa17.89■□□□□ 0.45
UBE2D4-201ENST00000222402 LARP1BQ659C4 914 aaKnown RBP17.89■□□□□ 0.45
UBE2D4-201ENST00000222402 EVI5LQ96CN4 794 aa17.89■□□□□ 0.45
UBE2D4-201ENST00000222402 HOXB7P09629 217 aa17.89■□□□□ 0.45
UBE2D4-201ENST00000222402 LINS1Q8NG48 757 aa17.89■□□□□ 0.45
UBE2D4-201ENST00000222402 ANKRD26Q9UPS8 1709 aa17.88■□□□□ 0.45
UBE2D4-201ENST00000222402 PTPRUQ92729 1446 aa17.88■□□□□ 0.45
UBE2D4-201ENST00000222402 COPS6Q7L5N1 327 aa17.88■□□□□ 0.45
UBE2D4-201ENST00000222402 XAGE3Q8WTP9 111 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms