RNA–Protein interactions for RNA: ENSMUST00000223097.1

Ccdc88c-204, Transcript of Protein Daple, mousemouse

TSL 1 (best) BASIC

Gene Ccdc88c, Length 1,253 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-204ENSMUST00000223097 PigbQ9JJQ0 542 aa19.52■□□□□ 0.72
Ccdc88c-204ENSMUST00000223097 Dpf1Q9QX66 387 aa19.52■□□□□ 0.72
Ccdc88c-204ENSMUST00000223097 Pdzph1Q8BGR1 1238 aa19.51■□□□□ 0.71
Ccdc88c-204ENSMUST00000223097 Ppp1r3fQ9JIG4 799 aa19.51■□□□□ 0.71
Ccdc88c-204ENSMUST00000223097 ClspnQ80YR7 1315 aa19.51■□□□□ 0.71
Ccdc88c-204ENSMUST00000223097 P2rx7Q9Z1M0 595 aa19.5■□□□□ 0.71
Ccdc88c-204ENSMUST00000223097 Tiam2Q6ZPF3 1715 aa19.5■□□□□ 0.71
Ccdc88c-204ENSMUST00000223097 Ambra1A2AH22 1300 aa19.5■□□□□ 0.71
Ccdc88c-204ENSMUST00000223097 TmpoQ61033 693 aaKnown RBP19.49■□□□□ 0.71
Ccdc88c-204ENSMUST00000223097 Nav1Q8CH77 1875 aa19.49■□□□□ 0.71
Ccdc88c-204ENSMUST00000223097 Col4a5Q63ZW6 1691 aa19.49■□□□□ 0.71
Ccdc88c-204ENSMUST00000223097 Setdb1O88974 1307 aa19.49■□□□□ 0.71
Ccdc88c-204ENSMUST00000223097 Col24a1Q30D77 1733 aa19.48■□□□□ 0.71
Ccdc88c-204ENSMUST00000223097 Znf428Q8C1M2 176 aa19.48■□□□□ 0.71
Ccdc88c-204ENSMUST00000223097 Stk31Q99MW1 1018 aa19.48■□□□□ 0.71
Ccdc88c-204ENSMUST00000223097 Usp19Q3UJD6 1360 aa19.47■□□□□ 0.71
Ccdc88c-204ENSMUST00000223097 Rasgrp4Q8BTM9 673 aa19.47■□□□□ 0.71
Ccdc88c-204ENSMUST00000223097 Mylk2Q8VCR8 613 aa19.47■□□□□ 0.71
Ccdc88c-204ENSMUST00000223097 MetP16056 1379 aa19.46■□□□□ 0.71
Ccdc88c-204ENSMUST00000223097 Rapgef4Q9EQZ6 1011 aa19.46■□□□□ 0.71
Ccdc88c-204ENSMUST00000223097 Prr5lA2AVJ5 370 aa19.45■□□□□ 0.7
Ccdc88c-204ENSMUST00000223097 Gm12185Q5NCB2 835 aa19.45■□□□□ 0.7
Ccdc88c-204ENSMUST00000223097 Fam83gQ5SWY7 812 aa19.45■□□□□ 0.7
Ccdc88c-204ENSMUST00000223097 Arid3aQ62431 601 aa19.45■□□□□ 0.7
Ccdc88c-204ENSMUST00000223097 Col5a2Q3U962 1497 aa19.43■□□□□ 0.7
Ccdc88c-204ENSMUST00000223097 Snai1Q02085 264 aa19.43■□□□□ 0.7
Ccdc88c-204ENSMUST00000223097 Tcerg1Q8CGF7 1100 aaKnown RBP19.43■□□□□ 0.7
Ccdc88c-204ENSMUST00000223097 PdgfdQ925I7 370 aa19.43■□□□□ 0.7
Ccdc88c-204ENSMUST00000223097 Mapk8ip2Q9ERE9 830 aa19.43■□□□□ 0.7
Ccdc88c-204ENSMUST00000223097 Usp48Q3V0C5 1052 aa19.42■□□□□ 0.7
Ccdc88c-204ENSMUST00000223097 Olfr247E9PVJ7 320 aa19.41■□□□□ 0.7
Ccdc88c-204ENSMUST00000223097 Olfr819K7N727 320 aa19.41■□□□□ 0.7
Ccdc88c-204ENSMUST00000223097 Thrap3Q569Z6 951 aaKnown RBP19.41■□□□□ 0.7
Ccdc88c-204ENSMUST00000223097 Esco1Q69Z69 843 aa19.41■□□□□ 0.7
Ccdc88c-204ENSMUST00000223097 Micall1Q8BGT6 870 aa19.41■□□□□ 0.7
Ccdc88c-204ENSMUST00000223097 Cdca7Q9D0M2 382 aa19.41■□□□□ 0.7
Ccdc88c-204ENSMUST00000223097 Btbd11Q6GQW0 1109 aa19.4■□□□□ 0.7
Ccdc88c-204ENSMUST00000223097 Dpf2Q61103 391 aaKnown RBP19.39■□□□□ 0.69
Ccdc88c-204ENSMUST00000223097 Gigyf1Q99MR1 1044 aaKnown RBP19.39■□□□□ 0.69
Ccdc88c-204ENSMUST00000223097 Cabp2Q9JLK4 216 aa19.39■□□□□ 0.69
Ccdc88c-204ENSMUST00000223097 Abcc12Q80WJ6 1366 aa19.39■□□□□ 0.69
Ccdc88c-204ENSMUST00000223097 Slc4a9E9PUP3 929 aa19.38■□□□□ 0.69
Ccdc88c-204ENSMUST00000223097 Plekhg5Q66T02 1073 aa19.38■□□□□ 0.69
Ccdc88c-204ENSMUST00000223097 Slf2Q6P9P0 1278 aa19.38■□□□□ 0.69
Ccdc88c-204ENSMUST00000223097 Tspoap1Q7TNF8 1846 aa19.37■□□□□ 0.69
Ccdc88c-204ENSMUST00000223097 Prr29B1ARI9 187 aa19.37■□□□□ 0.69
Ccdc88c-204ENSMUST00000223097 St5Q924W7 1134 aa19.37■□□□□ 0.69
Ccdc88c-204ENSMUST00000223097 Irx6Q9ER75 438 aa19.37■□□□□ 0.69
Ccdc88c-204ENSMUST00000223097 Ptf1aQ9QX98 324 aa19.37■□□□□ 0.69
Ccdc88c-204ENSMUST00000223097 VegfbP49766 207 aa19.36■□□□□ 0.69
Ccdc88c-204ENSMUST00000223097 Soga3Q6NZL0 945 aa19.36■□□□□ 0.69
Ccdc88c-204ENSMUST00000223097 Cnnm1Q0GA42 951 aa19.35■□□□□ 0.69
Ccdc88c-204ENSMUST00000223097 Tsen2Q6P7W5 460 aa19.35■□□□□ 0.69
Ccdc88c-204ENSMUST00000223097 Fhdc1Q3ULZ2 1149 aa19.34■□□□□ 0.69
Ccdc88c-204ENSMUST00000223097 Flad1Q8R123 492 aa19.34■□□□□ 0.69
Ccdc88c-204ENSMUST00000223097 Rtf1A2AQ19 715 aaKnown RBP19.33■□□□□ 0.68
Ccdc88c-204ENSMUST00000223097 SowahdQ8BY98 327 aa19.33■□□□□ 0.68
Ccdc88c-204ENSMUST00000223097 Iqcf3Q9D498 203 aa19.33■□□□□ 0.68
Ccdc88c-204ENSMUST00000223097 NgdnQ9DB96 315 aaKnown RBP19.33■□□□□ 0.68
Ccdc88c-204ENSMUST00000223097 Col4a1P02463 1669 aa19.31■□□□□ 0.68
Ccdc88c-204ENSMUST00000223097 Ifit1bl2Q3U687 466 aa19.31■□□□□ 0.68
Ccdc88c-204ENSMUST00000223097 Cers3Q1A3B0 383 aa19.3■□□□□ 0.68
Ccdc88c-204ENSMUST00000223097 Prkab2Q6PAM0 271 aa19.3■□□□□ 0.68
Ccdc88c-204ENSMUST00000223097 Atp2b4Q6Q477 1205 aa19.3■□□□□ 0.68
Ccdc88c-204ENSMUST00000223097 Ddx60E9PZQ1 1711 aa19.29■□□□□ 0.68
Ccdc88c-204ENSMUST00000223097 Usp34Q6ZQ93 3582 aa19.29■□□□□ 0.68
Ccdc88c-204ENSMUST00000223097 Zc3h15Q3TIV5 426 aaKnown RBP19.29■□□□□ 0.68
Ccdc88c-204ENSMUST00000223097 Vil1Q62468 827 aa19.29■□□□□ 0.68
Ccdc88c-204ENSMUST00000223097 Glis2Q8VDL9 521 aa19.29■□□□□ 0.68
Ccdc88c-204ENSMUST00000223097 Ttc5Q99LG4 440 aa19.29■□□□□ 0.68
Ccdc88c-204ENSMUST00000223097 U2af1Q9D883 239 aaKnown RBP19.29■□□□□ 0.68
Ccdc88c-204ENSMUST00000223097 TefQ9JLC6 301 aa19.29■□□□□ 0.68
Ccdc88c-204ENSMUST00000223097 Plagl1Q9JLQ4 704 aa19.29■□□□□ 0.68
Ccdc88c-204ENSMUST00000223097 Pde4bB1AWC9 736 aa19.28■□□□□ 0.68
Ccdc88c-204ENSMUST00000223097 Stox1B2RQL2 990 aa19.28■□□□□ 0.68
Ccdc88c-204ENSMUST00000223097 Cyp2c23E9Q5K4 494 aa19.28■□□□□ 0.68
Ccdc88c-204ENSMUST00000223097 CltaO08585 235 aa19.28■□□□□ 0.68
Ccdc88c-204ENSMUST00000223097 Iqsec3Q3TES0 1195 aa19.28■□□□□ 0.68
Ccdc88c-204ENSMUST00000223097 Kif13bA0A286YCV9 1847 aa19.28■□□□□ 0.68
Ccdc88c-204ENSMUST00000223097 Zfp646Q6NV66 1788 aa19.27■□□□□ 0.68
Ccdc88c-204ENSMUST00000223097 Dok7Q18PE0 504 aa19.27■□□□□ 0.68
Ccdc88c-204ENSMUST00000223097 Map3k9Q3U1V8 1077 aa19.27■□□□□ 0.68
Ccdc88c-204ENSMUST00000223097 Slc39a6Q8C145 765 aa19.27■□□□□ 0.68
Ccdc88c-204ENSMUST00000223097 Dcdc2bF7BCK0 340 aa19.26■□□□□ 0.67
Ccdc88c-204ENSMUST00000223097 Magea8O89012 320 aa19.26■□□□□ 0.67
Ccdc88c-204ENSMUST00000223097 Nlrp6Q91WS2 869 aa19.26■□□□□ 0.67
Ccdc88c-204ENSMUST00000223097 Rbm5Q91YE7 815 aaKnown RBP19.26■□□□□ 0.67
Ccdc88c-204ENSMUST00000223097 Dbndd1Q9CZ00 160 aa19.26■□□□□ 0.67
Ccdc88c-204ENSMUST00000223097 Flt1P35969 1333 aa19.25■□□□□ 0.67
Ccdc88c-204ENSMUST00000223097 Mtcl1Q3UHU5 1945 aa19.25■□□□□ 0.67
Ccdc88c-204ENSMUST00000223097 Ppp2r1aQ76MZ3 589 aa19.25■□□□□ 0.67
Ccdc88c-204ENSMUST00000223097 Mrc1Q61830 1456 aa19.24■□□□□ 0.67
Ccdc88c-204ENSMUST00000223097 Csf1rP09581 977 aa19.24■□□□□ 0.67
Ccdc88c-204ENSMUST00000223097 CastP51125 788 aa19.24■□□□□ 0.67
Ccdc88c-204ENSMUST00000223097 Lrch1P62046 709 aa19.24■□□□□ 0.67
Ccdc88c-204ENSMUST00000223097 Fstl1Q62356 306 aa19.24■□□□□ 0.67
Ccdc88c-204ENSMUST00000223097 Nlgn2Q69ZK9 836 aa19.24■□□□□ 0.67
Ccdc88c-204ENSMUST00000223097 Mapk8ip1Q9WVI9 707 aa19.24■□□□□ 0.67
Ccdc88c-204ENSMUST00000223097 Dctn1O08788 1281 aa19.23■□□□□ 0.67
Ccdc88c-204ENSMUST00000223097 Zc3h12cQ5DTV4 884 aa19.23■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms