RNA–Protein interactions for RNA: ENSMUST00000093346.5

H2afv-201, Transcript of Histone H2A.V, mousemouse

TSL 1 (best) BASIC

Gene H2afv, Length 519 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2afv-201ENSMUST00000093346 Trim52Q8CDV4 233 aa16.87■□□□□ 0.29
H2afv-201ENSMUST00000093346 Ccar1Q8CH18 1146 aaKnown RBP16.86■□□□□ 0.29
H2afv-201ENSMUST00000093346 Mtfr1lQ9CWE0 289 aa16.86■□□□□ 0.29
H2afv-201ENSMUST00000093346 Nsfl1cQ9CZ44 370 aaKnown RBP16.86■□□□□ 0.29
H2afv-201ENSMUST00000093346 Dpf1Q9QX66 387 aa16.86■□□□□ 0.29
H2afv-201ENSMUST00000093346 BcorQ8CGN4 1759 aa16.86■□□□□ 0.29
H2afv-201ENSMUST00000093346 Rbm26Q6NZN0 1012 aaKnown RBP16.85■□□□□ 0.29
H2afv-201ENSMUST00000093346 Gnl3lQ6PGG6 577 aaKnown RBP16.85■□□□□ 0.29
H2afv-201ENSMUST00000093346 Ddx60E9PZQ1 1711 aa16.84■□□□□ 0.29
H2afv-201ENSMUST00000093346 Cnksr1A2A9K7 700 aa16.84■□□□□ 0.29
H2afv-201ENSMUST00000093346 Strn4P58404 760 aa16.84■□□□□ 0.29
H2afv-201ENSMUST00000093346 Trip6Q9Z1Y4 480 aa16.84■□□□□ 0.29
H2afv-201ENSMUST00000093346 Kcnq2Q9Z351 759 aa16.84■□□□□ 0.29
H2afv-201ENSMUST00000093346 Kank1E9Q238 1360 aa16.84■□□□□ 0.29
H2afv-201ENSMUST00000093346 Lama4P97927 1816 aa16.84■□□□□ 0.29
H2afv-201ENSMUST00000093346 Gas2l2Q5SSG4 860 aa16.83■□□□□ 0.28
H2afv-201ENSMUST00000093346 Esco1Q69Z69 843 aa16.83■□□□□ 0.28
H2afv-201ENSMUST00000093346 Srp68Q8BMA6 625 aaKnown RBP16.83■□□□□ 0.28
H2afv-201ENSMUST00000093346 Gm6268A2A3U9 297 aa16.82■□□□□ 0.28
H2afv-201ENSMUST00000093346 Vamp4O70480 141 aa16.82■□□□□ 0.28
H2afv-201ENSMUST00000093346 Prom2Q3UUY6 835 aa16.82■□□□□ 0.28
H2afv-201ENSMUST00000093346 Ankle2Q6P1H6 964 aa16.82■□□□□ 0.28
H2afv-201ENSMUST00000093346 Slf2Q6P9P0 1278 aa16.82■□□□□ 0.28
H2afv-201ENSMUST00000093346 Ccdc171E9Q1U1 1324 aa16.81■□□□□ 0.28
H2afv-201ENSMUST00000093346 Ubn2Q80WC1 1314 aa16.81■□□□□ 0.28
H2afv-201ENSMUST00000093346 Tlr8P58682 1032 aa16.81■□□□□ 0.28
H2afv-201ENSMUST00000093346 CpzQ8R4V4 654 aa16.81■□□□□ 0.28
H2afv-201ENSMUST00000093346 Trim26Q99PN3 545 aa16.81■□□□□ 0.28
H2afv-201ENSMUST00000093346 Sipa1l3G3X9J0 1776 aa16.81■□□□□ 0.28
H2afv-201ENSMUST00000093346 CoilQ5SU73 570 aa16.8■□□□□ 0.28
H2afv-201ENSMUST00000093346 Nlrp3Q8R4B8 1033 aa16.8■□□□□ 0.28
H2afv-201ENSMUST00000093346 KarsQ99MN1 595 aaKnown RBP16.8■□□□□ 0.28
H2afv-201ENSMUST00000093346 ScaperF8VQ70 1398 aaKnown RBP16.79■□□□□ 0.28
H2afv-201ENSMUST00000093346 Wdhd1P59328 1117 aa16.79■□□□□ 0.28
H2afv-201ENSMUST00000093346 Snai1Q02085 264 aa16.79■□□□□ 0.28
H2afv-201ENSMUST00000093346 1810065E05RikQ5NC41 235 aa16.79■□□□□ 0.28
H2afv-201ENSMUST00000093346 Ccdc60Q8C4J0 545 aa16.79■□□□□ 0.28
H2afv-201ENSMUST00000093346 Lrp5Q91VN0 1614 aa16.78■□□□□ 0.28
H2afv-201ENSMUST00000093346 Ttll7A4Q9F0 912 aa16.78■□□□□ 0.28
H2afv-201ENSMUST00000093346 Nop58Q6DFW4 536 aaKnown RBP16.78■□□□□ 0.28
H2afv-201ENSMUST00000093346 SowahdQ8BY98 327 aa16.78■□□□□ 0.28
H2afv-201ENSMUST00000093346 Ppm1fQ8CGA0 452 aa16.78■□□□□ 0.28
H2afv-201ENSMUST00000093346 Polr3glQ8R0C0 218 aa16.78■□□□□ 0.28
H2afv-201ENSMUST00000093346 Igfbp6P47880 238 aa16.77■□□□□ 0.28
H2afv-201ENSMUST00000093346 Chl1P70232 1209 aa16.77■□□□□ 0.28
H2afv-201ENSMUST00000093346 Ubxn2bQ0KL01 331 aa16.77■□□□□ 0.28
H2afv-201ENSMUST00000093346 Sv2bQ8BG39 683 aa16.77■□□□□ 0.28
H2afv-201ENSMUST00000093346 NgdnQ9DB96 315 aaKnown RBP16.77■□□□□ 0.28
H2afv-201ENSMUST00000093346 Flt4P35917 1363 aa16.77■□□□□ 0.27
H2afv-201ENSMUST00000093346 Ssc5dQ8BV57 1371 aa16.77■□□□□ 0.27
H2afv-201ENSMUST00000093346 Zswim8Q3UHH1 1832 aaKnown RBP16.76■□□□□ 0.27
H2afv-201ENSMUST00000093346 Ifit1bl2Q3U687 466 aa16.76■□□□□ 0.27
H2afv-201ENSMUST00000093346 Fam83gQ5SWY7 812 aa16.76■□□□□ 0.27
H2afv-201ENSMUST00000093346 Irf9Q61179 399 aa16.76■□□□□ 0.27
H2afv-201ENSMUST00000093346 Znrd1-asQ8R0E5 213 aa16.76■□□□□ 0.27
H2afv-201ENSMUST00000093346 Prdm11A2AGX3 565 aa16.75■□□□□ 0.27
H2afv-201ENSMUST00000093346 Cavin2Q63918 418 aaKnown RBP16.75■□□□□ 0.27
H2afv-201ENSMUST00000093346 Tktl2Q9D4D4 627 aa16.75■□□□□ 0.27
H2afv-201ENSMUST00000093346 Echdc1Q9D9V3 322 aa16.75■□□□□ 0.27
H2afv-201ENSMUST00000093346 Zbtb40Q6PCS8 1258 aa16.74■□□□□ 0.27
H2afv-201ENSMUST00000093346 Trim34aQ99PP6 485 aa16.74■□□□□ 0.27
H2afv-201ENSMUST00000093346 Togaram1Q6A070 1776 aaKnown RBP16.74■□□□□ 0.27
H2afv-201ENSMUST00000093346 G3bp1P97855 465 aaKnown RBP16.73■□□□□ 0.27
H2afv-201ENSMUST00000093346 Hirip3Q8BLH7 601 aa16.73■□□□□ 0.27
H2afv-201ENSMUST00000093346 Egfem1Q8C088 590 aa16.73■□□□□ 0.27
H2afv-201ENSMUST00000093346 Magea6O89010 325 aa16.72■□□□□ 0.27
H2afv-201ENSMUST00000093346 Fkbp1aP26883 108 aaKnown RBP16.72■□□□□ 0.27
H2afv-201ENSMUST00000093346 Magea3Q6T340 320 aa16.72■□□□□ 0.27
H2afv-201ENSMUST00000093346 Plekhm2Q80TQ5 1018 aa16.72■□□□□ 0.27
H2afv-201ENSMUST00000093346 Mapk8ip1Q9WVI9 707 aa16.72■□□□□ 0.27
H2afv-201ENSMUST00000093346 Ambra1A2AH22 1300 aa16.71■□□□□ 0.27
H2afv-201ENSMUST00000093346 Cfap70D3YVL2 1141 aa16.71■□□□□ 0.27
H2afv-201ENSMUST00000093346 Arid3aQ62431 601 aa16.71■□□□□ 0.27
H2afv-201ENSMUST00000093346 Bicc1Q99MQ1 977 aaKnown RBP16.71■□□□□ 0.27
H2afv-201ENSMUST00000093346 Pcgf6Q99NA9 353 aa16.71■□□□□ 0.27
H2afv-201ENSMUST00000093346 Pde4bB1AWC9 736 aa16.7■□□□□ 0.26
H2afv-201ENSMUST00000093346 Hspa2P17156 633 aa16.7■□□□□ 0.26
H2afv-201ENSMUST00000093346 Aplp1Q03157 653 aa16.7■□□□□ 0.26
H2afv-201ENSMUST00000093346 Zc3h12cQ5DTV4 884 aa16.7■□□□□ 0.26
H2afv-201ENSMUST00000093346 Adam1aQ60813 791 aa16.7■□□□□ 0.26
H2afv-201ENSMUST00000093346 Ankib1Q6ZPS6 1085 aa16.7■□□□□ 0.26
H2afv-201ENSMUST00000093346 Tmco5bQ80X59 307 aa16.7■□□□□ 0.26
H2afv-201ENSMUST00000093346 Disp3A3KFU9 1347 aa16.7■□□□□ 0.26
H2afv-201ENSMUST00000093346 StrcQ8VIM6 1809 aa16.69■□□□□ 0.26
H2afv-201ENSMUST00000093346 Cyp2c23E9Q5K4 494 aa16.69■□□□□ 0.26
H2afv-201ENSMUST00000093346 Npy5rO70342 466 aa16.69■□□□□ 0.26
H2afv-201ENSMUST00000093346 Cyp2d11P24457 504 aa16.69■□□□□ 0.26
H2afv-201ENSMUST00000093346 Rangap1P46061 589 aaKnown RBP16.69■□□□□ 0.26
H2afv-201ENSMUST00000093346 Rtkn2Q14B46 604 aa16.69■□□□□ 0.26
H2afv-201ENSMUST00000093346 Gimap8Q75N62 688 aa16.69■□□□□ 0.26
H2afv-201ENSMUST00000093346 Usp21Q9QZL6 566 aa16.69■□□□□ 0.26
H2afv-201ENSMUST00000093346 Duox1A2AQ92 1551 aa16.68■□□□□ 0.26
H2afv-201ENSMUST00000093346 Stox1B2RQL2 990 aa16.68■□□□□ 0.26
H2afv-201ENSMUST00000093346 Tgfb2P27090 414 aa16.68■□□□□ 0.26
H2afv-201ENSMUST00000093346 Map3k2Q61083 619 aa16.68■□□□□ 0.26
H2afv-201ENSMUST00000093346 Ddx58Q6Q899 926 aa16.68■□□□□ 0.26
H2afv-201ENSMUST00000093346 Mrps5Q99N87 432 aaKnown RBP16.68■□□□□ 0.26
H2afv-201ENSMUST00000093346 Hsp90ab1P11499 724 aaKnown RBP16.67■□□□□ 0.26
H2afv-201ENSMUST00000093346 MarsQ68FL6 902 aaKnown RBP16.67■□□□□ 0.26
H2afv-201ENSMUST00000093346 AbraQ8BUZ1 375 aa16.67■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 63.1 ms