RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 Miga2Q8BK03 593 aa10.26□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Rbm27Q5SFM8 1060 aaKnown RBP10.26□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Aldh1l1Q8R0Y6 902 aa10.26□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Caskin1Q6P9K8 1431 aa10.26□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Znf18Q810A1 556 aa10.25□□□□□ -0.77
Ttc28-201ENSMUST00000040111 AI481877A2ALV5 1481 aa10.25□□□□□ -0.77
Ttc28-201ENSMUST00000040111 AnlnQ8K298 1121 aaKnown RBP10.25□□□□□ -0.77
Ttc28-201ENSMUST00000040111 CenphQ9QYM8 241 aa10.25□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Vps37dQ810I0 261 aa10.25□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Myl6bQ8CI43 207 aa10.25□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Lrrc2Q8VDB8 371 aa10.25□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Gcc1Q9D4H2 778 aa10.25□□□□□ -0.77
Ttc28-201ENSMUST00000040111 AampJ3QN89 436 aa10.25□□□□□ -0.77
Ttc28-201ENSMUST00000040111 NmiO35309 314 aa10.25□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Wdr70Q3TWF6 657 aa10.25□□□□□ -0.77
Ttc28-201ENSMUST00000040111 RarsQ9D0I9 660 aaKnown RBP10.25□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Prkg1P0C605 671 aa10.25□□□□□ -0.77
Ttc28-201ENSMUST00000040111 NefhP19246 1090 aa10.25□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Zc3h12cQ5DTV4 884 aa10.25□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Ift57Q8BXG3 429 aa10.25□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Znf653Q6YND2 615 aa10.25□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Ppp1r3fQ9JIG4 799 aa10.25□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Gjc1P28229 396 aa10.25□□□□□ -0.77
Ttc28-201ENSMUST00000040111 NapbP28663 298 aa10.25□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Slc13a4Q8BZ82 625 aa10.25□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Map3k1P53349 1493 aa10.25□□□□□ -0.77
Ttc28-201ENSMUST00000040111 WizO88286 1684 aaKnown RBP10.24□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Tbc1d9Q3UYK3 1264 aa10.24□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Arid3aQ62431 601 aa10.24□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Rad17Q6NXW6 688 aa10.24□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Anxa1P10107 346 aaKnown RBP10.24□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Bag1Q60739 355 aa10.24□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Eif4g1Q6NZJ6 1600 aaKnown RBP10.24□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Abcd1P48410 736 aa10.24□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Cbx1P83917 185 aaKnown RBP10.24□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Kiaa0753Q6A000 959 aa10.24□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Cdc45Q9Z1X9 566 aa10.24□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Fez1Q8K0X8 392 aa10.24□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Edc3Q8K2D3 508 aaKnown RBP10.24□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Mtmr7Q9Z2C9 660 aa10.24□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Tmco3Q8BH01 678 aa10.24□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Mcm2P97310 904 aa10.23□□□□□ -0.77
Ttc28-201ENSMUST00000040111 IntuQ059U7 942 aa10.23□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Cwc25Q9DBF7 416 aa10.23□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Qtrt2B8ZXI1 415 aa10.23□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Sp4Q62445 782 aa10.23□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Zscan20B2KFW1 1030 aa10.23□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Dbndd1Q9CZ00 160 aa10.23□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Triml1Q8BVP1 470 aa10.23□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Eya1P97767 591 aa10.23□□□□□ -0.77
Ttc28-201ENSMUST00000040111 3425401B19RikD3Z1D3 1412 aa10.23□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Igf1rQ60751 1373 aa10.23□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Matr3Q8K310 846 aaKnown RBP10.22□□□□□ -0.77
Ttc28-201ENSMUST00000040111 EvcP57680 1005 aa10.22□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Ppm1eQ80TL0 749 aa10.22□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Ets1P27577 440 aa10.22□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Dhx38Q80X98 1228 aa10.22□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Lamb3Q61087 1168 aa10.22□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Cchcr1Q8K2I2 770 aa10.22□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Idi1P58044 227 aa10.22□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Slu7Q8BHJ9 585 aa10.22□□□□□ -0.77
Ttc28-201ENSMUST00000040111 ParvgQ9ERD8 331 aa10.22□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Lmbrd2Q8C561 694 aa10.22□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Vps16Q920Q4 839 aa10.22□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Prdm1Q60636 856 aa10.22□□□□□ -0.77
Ttc28-201ENSMUST00000040111 ZgpatQ8VDM1 511 aa10.22□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Gnl2Q99LH1 728 aaKnown RBP10.22□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Naip7Q9JIB3 1402 aa10.22□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Naip6Q9JIB6 1403 aa10.22□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Hspa2P17156 633 aa10.22□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Bsdc1Q80Y55 427 aa10.22□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Zkscan1Q8BGS3 561 aaKnown RBP10.21□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Tango6Q8C3S2 1079 aa10.21□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Krt84Q99M73 603 aa10.21□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Wdhd1P59328 1117 aa10.21□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Vps54Q5SPW0 977 aa10.21□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Trim25Q61510 634 aaKnown RBP10.21□□□□□ -0.77
Ttc28-201ENSMUST00000040111 Ppp1r21Q3TDD9 780 aa10.21□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Rnf187Q8BFX1 236 aa10.21□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Ncf1Q09014 390 aa10.21□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Ccdc158Q8CDI6 1109 aa10.21□□□□□ -0.78
Ttc28-201ENSMUST00000040111 ZwintQ9CQU5 252 aa10.21□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Asxl1P59598 1514 aa10.21□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Abtb2Q7TQI7 1024 aa10.21□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Akr1c19G3X9Y6 323 aa10.2□□□□□ -0.78
Ttc28-201ENSMUST00000040111 GckrQ91X44 587 aa10.2□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Plekhg2Q6KAU7 1340 aa10.2□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Ssh2Q5SW75 1423 aa10.2□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Rnf216P58283 853 aa10.2□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Rufy2Q8R4C2 606 aa10.2□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Slain2Q8CI08 581 aa10.2□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Dok7Q18PE0 504 aa10.2□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Eif6O55135 245 aa10.2□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Eif3aP23116 1344 aaKnown RBP10.2□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Larp1Q6ZQ58 1072 aaKnown RBP10.2□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Krt85Q9Z2T6 507 aa10.2□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Rasa1E9PYG6 1038 aa10.2□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Otud6bQ8K2H2 294 aa10.2□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Adgrb2Q8CGM1 1561 aa10.2□□□□□ -0.78
Ttc28-201ENSMUST00000040111 Mlh3A0A1Y7VMP7 1443 aa10.2□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 48 ms