RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 SH3BGRL2Q9UJC5 107 aa16.78■□□□□ 0.28
SHKBP1-227ENST00000602011 PDE10AQ9Y233 779 aa16.78■□□□□ 0.28
SHKBP1-227ENST00000602011 IGHV3-20A0A0C4DH32 117 aa16.77■□□□□ 0.28
SHKBP1-227ENST00000602011 URADA6NGE7 173 aa16.77■□□□□ 0.28
SHKBP1-227ENST00000602011 WISP2O76076 250 aa16.77■□□□□ 0.28
SHKBP1-227ENST00000602011 NPPBP16860 134 aa16.77■□□□□ 0.28
SHKBP1-227ENST00000602011 EFNA3P52797 238 aa16.77■□□□□ 0.28
SHKBP1-227ENST00000602011 NAE1Q13564 534 aa16.77■□□□□ 0.28
SHKBP1-227ENST00000602011 ABRAXAS2Q15018 415 aa16.77■□□□□ 0.28
SHKBP1-227ENST00000602011 CYP1B1Q16678 543 aa16.77■□□□□ 0.28
SHKBP1-227ENST00000602011 SFT2D3Q587I9 215 aa16.77■□□□□ 0.28
SHKBP1-227ENST00000602011 HSP90AA5PQ58FG0 334 aa16.77■□□□□ 0.28
SHKBP1-227ENST00000602011 ANKRD22Q5VYY1 191 aa16.77■□□□□ 0.28
SHKBP1-227ENST00000602011 DUPD1Q68J44 220 aa16.77■□□□□ 0.28
SHKBP1-227ENST00000602011 SLC25A25Q6KCM7 469 aa16.77■□□□□ 0.28
SHKBP1-227ENST00000602011 PAPD4Q6PIY7 484 aaKnown RBP16.77■□□□□ 0.28
SHKBP1-227ENST00000602011 GALNT7Q86SF2 657 aa16.77■□□□□ 0.28
SHKBP1-227ENST00000602011 GAS2L3Q86XJ1 694 aa16.77■□□□□ 0.28
SHKBP1-227ENST00000602011 CRLF3Q8IUI8 442 aa16.77■□□□□ 0.28
SHKBP1-227ENST00000602011 RASGEF1CQ8N431 466 aa16.77■□□□□ 0.28
SHKBP1-227ENST00000602011 AFAP1L2Q8N4X5 818 aa16.77■□□□□ 0.28
SHKBP1-227ENST00000602011 C2CD4AQ8NCU7 369 aaPredicted RBP16.77■□□□□ 0.28
SHKBP1-227ENST00000602011 EEF1AKMT1Q8WVE0 214 aa16.77■□□□□ 0.28
SHKBP1-227ENST00000602011 TBC1D20Q96BZ9 403 aa16.77■□□□□ 0.28
SHKBP1-227ENST00000602011 HCN3Q9P1Z3 774 aa16.77■□□□□ 0.28
SHKBP1-227ENST00000602011 NAALAD2Q9Y3Q0 740 aa16.77■□□□□ 0.28
SHKBP1-227ENST00000602011 DCHS2Q6V1P9 2916 aa16.76■□□□□ 0.27
SHKBP1-227ENST00000602011 CCDC168Q8NDH2 2452 aa16.76■□□□□ 0.27
SHKBP1-227ENST00000602011 SCN2AQ99250 2005 aa16.76■□□□□ 0.27
SHKBP1-227ENST00000602011 LCMT2O60294 686 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-227ENST00000602011 SP1P08047 785 aa16.76■□□□□ 0.27
SHKBP1-227ENST00000602011 SSTR2P30874 369 aa16.76■□□□□ 0.27
SHKBP1-227ENST00000602011 CXCR5P32302 372 aa16.76■□□□□ 0.27
SHKBP1-227ENST00000602011 COILP38432 576 aaPredicted RBP16.76■□□□□ 0.27
SHKBP1-227ENST00000602011 RIPPLY3P57055 190 aa16.76■□□□□ 0.27
SHKBP1-227ENST00000602011 OR4D2P58180 307 aa16.76■□□□□ 0.27
SHKBP1-227ENST00000602011 RHAGQ02094 409 aa16.76■□□□□ 0.27
SHKBP1-227ENST00000602011 OC90Q02509 493 aaPredicted RBP16.76■□□□□ 0.27
SHKBP1-227ENST00000602011 USP10Q14694 798 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-227ENST00000602011 CCDC137Q6PK04 289 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-227ENST00000602011 PRSS41Q7RTY9 318 aa16.76■□□□□ 0.27
SHKBP1-227ENST00000602011 RPS19BP1Q86WX3 136 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-227ENST00000602011 GHDCQ8N2G8 530 aa16.76■□□□□ 0.27
SHKBP1-227ENST00000602011 POGLUT1Q8NBL1 392 aa16.76■□□□□ 0.27
SHKBP1-227ENST00000602011 KCT2Q8NC54 265 aa16.76■□□□□ 0.27
SHKBP1-227ENST00000602011 OLFM1Q99784 485 aa16.76■□□□□ 0.27
SHKBP1-227ENST00000602011 TRIM45Q9H8W5 580 aaPredicted RBP16.76■□□□□ 0.27
SHKBP1-227ENST00000602011 ITGB1BP2Q9UKP3 347 aa16.76■□□□□ 0.27
SHKBP1-227ENST00000602011 CORO1CQ9ULV4 474 aaPredicted RBP16.76■□□□□ 0.27
SHKBP1-227ENST00000602011 JRKLQ9Y4A0 524 aa16.76■□□□□ 0.27
SHKBP1-227ENST00000602011 PCNX1Q96RV3 2341 aa16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 TRBC2A0A5B9 178 aa16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 GABRR3A8MPY1 467 aa16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 NDC80O14777 642 aa16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 ASNA1O43681 348 aa16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 GALR3O60755 368 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 KRT38O76015 456 aa16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 FHP07954 510 aa16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 ENO2P09104 434 aaPredicted RBP16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 ALOX12P18054 663 aa16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 PGAM1P18669 254 aa16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 CAPN3P20807 821 aa16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 AHRP35869 848 aa16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 SLC26A5P58743 744 aa16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 IL2P60568 153 aa16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 RGS1Q08116 209 aa16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 C3AR1Q16581 482 aa16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 ABHD13Q7L211 337 aa16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 PPIL6Q8IXY8 311 aa16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 NAT8LQ8N9F0 302 aa16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 OR56A3Q8NH54 315 aa16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 ELP5Q8TE02 316 aa16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 ADAMTS18Q8TE60 1221 aa16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 PHF10Q8WUB8 498 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 SNF8Q96H20 258 aa16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 PEX11GQ96HA9 241 aa16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 LURAP1Q96LR2 239 aa16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 SIGLEC12Q96PQ1 595 aa16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 ATG10Q9H0Y0 220 aa16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 LANCL2Q9NS86 450 aa16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 IARS2Q9NSE4 1012 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 LRFN1Q9P244 771 aa16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 MEMO1Q9Y316 297 aa16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 NEU2Q9Y3R4 380 aa16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 HIVEP1P15822 2718 aa16.75■□□□□ 0.27
SHKBP1-227ENST00000602011 FEZF1A0PJY2 475 aa16.74■□□□□ 0.27
SHKBP1-227ENST00000602011 SYNDIG1LA6NDD5 238 aa16.74■□□□□ 0.27
SHKBP1-227ENST00000602011 GOLGA8MH3BSY2 632 aa16.74■□□□□ 0.27
SHKBP1-227ENST00000602011 RDH16O75452 317 aa16.74■□□□□ 0.27
SHKBP1-227ENST00000602011 CLDN14O95500 239 aa16.74■□□□□ 0.27
SHKBP1-227ENST00000602011 CDH1P12830 882 aa16.74■□□□□ 0.27
SHKBP1-227ENST00000602011 FNTAP49354 379 aa16.74■□□□□ 0.27
SHKBP1-227ENST00000602011 CYB561P49447 251 aa16.74■□□□□ 0.27
SHKBP1-227ENST00000602011 TERF1P54274 439 aa16.74■□□□□ 0.27
SHKBP1-227ENST00000602011 DHX9Q08211 1270 aaKnown RBP16.74■□□□□ 0.27
SHKBP1-227ENST00000602011 CSHL1Q14406 222 aa16.74■□□□□ 0.27
SHKBP1-227ENST00000602011 SPINK14Q6IE38 97 aa16.74■□□□□ 0.27
SHKBP1-227ENST00000602011 TTC27Q6P3X3 843 aa16.74■□□□□ 0.27
SHKBP1-227ENST00000602011 PAQR3Q6TCH7 311 aa16.74■□□□□ 0.27
SHKBP1-227ENST00000602011 PDSS2Q86YH6 399 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms