RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 PCYOX1Q9UHG3 505 aa4.61□□□□□ -1.67
ERCC1-216ENST00000592444 KLHL21Q9UJP4 597 aa4.61□□□□□ -1.67
ERCC1-216ENST00000592444 AMFRQ9UKV5 643 aa4.61□□□□□ -1.67
ERCC1-216ENST00000592444 FZD10Q9ULW2 581 aa4.61□□□□□ -1.67
ERCC1-216ENST00000592444 HPCAL4Q9UM19 191 aa4.61□□□□□ -1.67
ERCC1-216ENST00000592444 LAMP3Q9UQV4 416 aa4.61□□□□□ -1.67
ERCC1-216ENST00000592444 KIAA1549Q9HCM3 1950 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 DNAH7Q8WXX0 4024 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 IGHV1-45A0A0A0MS14 117 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 EFCAB8A8MWE9 144 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 WASH4PA8MWX3 477 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 EEF1E1-BLOC1S5C9J1V9 151 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 KLRC4-KLRK1H3BQV0 150 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 PGRMC1O00264 195 aaKnown RBP4.6□□□□□ -1.67
ERCC1-216ENST00000592444 BCKDKO14874 412 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 ZSCAN9O15535 394 aaPredicted RBP4.6□□□□□ -1.67
ERCC1-216ENST00000592444 EEF1E1O43324 174 aaKnown RBP4.6□□□□□ -1.67
ERCC1-216ENST00000592444 RAD51CO43502 376 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 MFSD11O43934 449 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 NME2P1O60361 137 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 WDR1O75083 606 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 NDUFS7O75251 213 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 SLC25A12O75746 678 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 SUN1O94901 812 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 HEXIM1O94992 359 aaKnown RBP4.6□□□□□ -1.67
ERCC1-216ENST00000592444 PEX11BO96011 259 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 C1QAP02745 245 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 MTHFD1P11586 935 aaKnown RBP4.6□□□□□ -1.67
ERCC1-216ENST00000592444 COL6A2P12110 1019 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 POLR2CP19387 275 aaPredicted RBP4.6□□□□□ -1.67
ERCC1-216ENST00000592444 NME2P22392 152 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 KDELR1P24390 212 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 PSMA2P25787 234 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 ARNTP27540 789 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 CASQ1P31415 396 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 SDC4P31431 198 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 CDKN1AP38936 164 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 MAGEA6P43360 314 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 HCAR3P49019 387 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 GZMKP49863 264 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 AGFG1P52594 562 aaKnown RBP4.6□□□□□ -1.67
ERCC1-216ENST00000592444 AIF1P55008 147 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 MTTPP55157 894 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 RWDD2BP57060 319 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 LOXL3P58215 753 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 RPS4XP62701 263 aaKnown RBP4.6□□□□□ -1.67
ERCC1-216ENST00000592444 POLR2LP62875 67 aaKnown RBP4.6□□□□□ -1.67
ERCC1-216ENST00000592444 KLC1Q07866 573 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 FOXL1Q12952 345 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 NME3Q13232 169 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 GALNT3Q14435 633 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 GRM3Q14832 879 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 PAFAH1B3Q15102 231 aaKnown RBP4.6□□□□□ -1.67
ERCC1-216ENST00000592444 NOMO1Q15155 1222 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 RPS6KA1Q15418 735 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 INSCQ1MX18 579 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 DUPD1Q68J44 220 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 ABRAXAS1Q6UWZ7 409 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 ZDHHC24Q6UX98 284 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 SEM1Q6ZVN7 128 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 TTLL10Q6ZVT0 673 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 FAM131BQ86XD5 332 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 PYROXD2Q8N2H3 581 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 HORMAD2Q8N7B1 307 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 POGLUT1Q8NBL1 392 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 TNIP2Q8NFZ5 429 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 STK35Q8TDR2 534 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 CREB3L4Q8TEY5 395 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 ASB11Q8WXH4 323 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 ALKBH8Q96BT7 664 aaKnown RBP4.6□□□□□ -1.67
ERCC1-216ENST00000592444 AP2M1Q96CW1 435 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 ZNF354BQ96LW1 612 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 DMRTB1Q96MA1 342 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 CSPG4P5Q96PW8 444 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 SMC6Q96SB8 1091 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 NPAS2Q99743 824 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 CNPPD1Q9BV87 410 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 SELENOOQ9BVL4 669 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 OSBPL8Q9BZF1 889 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 ABCG8Q9H221 673 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 EPB41L4BQ9H329 900 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 UNKLQ9H9P5 680 aaKnown RBP4.6□□□□□ -1.67
ERCC1-216ENST00000592444 PLAC1Q9HBJ0 212 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 ST7Q9NRC1 585 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 ZDHHC18Q9NUE0 388 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 RIC8BQ9NVN3 520 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.6□□□□□ -1.67
ERCC1-216ENST00000592444 CWC15Q9P013 229 aaKnown RBP4.6□□□□□ -1.67
ERCC1-216ENST00000592444 NKX1-2Q9UD57 310 aaPredicted RBP4.6□□□□□ -1.67
ERCC1-216ENST00000592444 ZNF629Q9UEG4 869 aaPredicted RBP4.6□□□□□ -1.67
ERCC1-216ENST00000592444 NDRG3Q9UGV2 375 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 C3orf18Q9UK00 162 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 NXT1Q9UKK6 140 aaKnown RBP4.6□□□□□ -1.67
ERCC1-216ENST00000592444 ACSL5Q9ULC5 683 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 WDR37Q9Y2I8 494 aa4.6□□□□□ -1.67
ERCC1-216ENST00000592444 LCE6AA0A183 80 aa4.59□□□□□ -1.67
ERCC1-216ENST00000592444 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.59□□□□□ -1.67
ERCC1-216ENST00000592444 MBD3L3A6NE82 208 aaPredicted RBP4.59□□□□□ -1.67
ERCC1-216ENST00000592444 VSTM2BA6NLU5 285 aa4.59□□□□□ -1.67
ERCC1-216ENST00000592444 APOC4-APOC2K7ER74 178 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms