RNA–Protein interactions for RNA: ENST00000590792.1

CCDC58P3-201, Transcript of coiled-coil domain containing 58 pseudogene 3, humanhuman

BASIC

Gene CCDC58P3, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58P3-201ENST00000590792 HES6Q96HZ4 224 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 CNDP2Q96KP4 475 aaKnown RBP4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 MTMR9Q96QG7 549 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 OR2A14Q96R47 310 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 NUDCD1Q96RS6 583 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 TMEM175Q9BSA9 504 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 MAP3K20Q9NYL2 800 aaKnown RBP4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 MDFICQ9P1T7 246 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 BCCIPQ9P287 314 aaKnown RBP eCLIP4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 POLG2Q9UHN1 485 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 GINS2Q9Y248 185 aa4.34□□□□□ -1.71
CCDC58P3-201ENST00000590792 CUBNO60494 3623 aa4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 GPC4O75487 556 aa4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 WISP2O76076 250 aa4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 TPPPO94811 219 aa4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 LDOC1O95751 146 aaPredicted RBP4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 NR1D1P20393 614 aa4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 TCEA1P23193 301 aaKnown RBP4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 HADHAP40939 763 aa4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 ARCN1P48444 511 aaKnown RBP4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 HOXA1P49639 335 aaPredicted RBP4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 GEMIN4P57678 1058 aaKnown RBP4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 KRTAP10-6P60371 365 aaPredicted RBP4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 ARF3P61204 181 aaPredicted RBP4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 TIMM10P62072 90 aa4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 ARF1P84077 181 aaKnown RBP4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 DMP1Q13316 513 aaPredicted RBP4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 CRYMQ14894 314 aa4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 MAPRE1Q15691 268 aaKnown RBP4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 BHLHB9Q6PI77 547 aa4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 PLEKHM3Q6ZWE6 761 aa4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 HACE1Q8IYU2 909 aa4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 TTC39CQ8N584 583 aa4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 GBGT1Q8N5D6 347 aa4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 C1orf52Q8N6N3 182 aaKnown RBP4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 SLC38A9Q8NBW4 561 aa4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 HTR3CQ8WXA8 447 aa4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 TMEM158Q8WZ71 300 aa4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 NEUROD6Q96NK8 337 aa4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 PGLYRP2Q96PD5 576 aa4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 SRSF8Q9BRL6 282 aaKnown RBP4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 CHCHD6Q9BRQ6 235 aa4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 GPR88Q9GZN0 384 aa4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 UPF2Q9HAU5 1272 aaKnown RBP4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 TRPC7Q9HCX4 862 aa4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 MARCH5Q9NX47 278 aa4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 OGFRQ9NZT2 677 aa4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 FBXL17Q9UF56 701 aa4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 MMP17Q9ULZ9 603 aa4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 TMEM184BQ9Y519 407 aaPredicted RBP4.33□□□□□ -1.72
CCDC58P3-201ENST00000590792 IGLV5-45A0A087WSX0 123 aa4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 C5orf60A6NFR6 353 aa4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 CDRT15L2A8MXV6 281 aa4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 TMEM189-UBE2V1I3L0A0 370 aa4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 PAPSS1O43252 624 aaPredicted RBP4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 ZBTB43O43298 467 aa4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 SYNGR3O43761 229 aa4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 ZNF217O75362 1048 aa4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 PTP4A3O75365 173 aa4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 IGHV4-39P01824 125 aa4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 KRT19P08727 400 aa4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 UQCRFS1P1P0C7P4 283 aa4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 ZNF853P0CG23 659 aa4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 GARSP41250 739 aaKnown RBP4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 SLC1A4P43007 532 aa4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 SPOCK1Q08629 439 aa4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 UBE2V1Q13404 147 aa4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 LACTB2Q53H82 288 aaPredicted RBP4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 OTUD3Q5T2D3 398 aaPredicted RBP4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 METTL7BQ6UX53 244 aa4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 PIWIL4Q7Z3Z4 852 aaKnown RBP4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 TCEAL4Q96EI5 215 aa4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 ST6GAL2Q96JF0 529 aa4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 ZNF354BQ96LW1 612 aa4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 GFI1Q99684 422 aa4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 CRNKL1Q9BZJ0 848 aaKnown RBP4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 RAD21L1Q9H4I0 556 aa4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 TFB2MQ9H5Q4 396 aaKnown RBP4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 PAG1Q9NWQ8 432 aa4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 CLIP2Q9UDT6 1046 aa4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 DBNLQ9UJU6 430 aaKnown RBP4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 MEGF8Q7Z7M0 2845 aa4.32□□□□□ -1.72
CCDC58P3-201ENST00000590792 CROCCQ5TZA2 2017 aa4.31□□□□□ -1.72
CCDC58P3-201ENST00000590792 ANKRD66B4E2M5 251 aa4.31□□□□□ -1.72
CCDC58P3-201ENST00000590792 J3QR06 171 aa4.31□□□□□ -1.72
CCDC58P3-201ENST00000590792 AP3D1O14617 1153 aa4.31□□□□□ -1.72
CCDC58P3-201ENST00000590792 CTSVO60911 334 aa4.31□□□□□ -1.72
CCDC58P3-201ENST00000590792 GM2AP17900 193 aa4.31□□□□□ -1.72
CCDC58P3-201ENST00000590792 MCCP23508 829 aa4.31□□□□□ -1.72
CCDC58P3-201ENST00000590792 PON1P27169 355 aa4.31□□□□□ -1.72
CCDC58P3-201ENST00000590792 RXRGP48443 463 aa4.31□□□□□ -1.72
CCDC58P3-201ENST00000590792 CTSCP53634 463 aa4.31□□□□□ -1.72
CCDC58P3-201ENST00000590792 PPP2R2BQ00005 443 aa4.31□□□□□ -1.72
CCDC58P3-201ENST00000590792 MBTD1Q05BQ5 628 aa4.31□□□□□ -1.72
CCDC58P3-201ENST00000590792 GAGE5Q13069 117 aa4.31□□□□□ -1.72
CCDC58P3-201ENST00000590792 GAGE6Q13070 117 aa4.31□□□□□ -1.72
CCDC58P3-201ENST00000590792 MEP1AQ16819 746 aa4.31□□□□□ -1.72
CCDC58P3-201ENST00000590792 RAB6CQ53S08 254 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms