RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	RIMKLA	Q8IXN7	391 aa		10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	ZCCHC7	Q8N3Z6	543 aa	Known RBP	10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	C2orf73	Q8N5S3	287 aa	Predicted RBP	10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	MFSD2A	Q8NA29	543 aa		10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	MAGEE2	Q8TD90	523 aa	Predicted RBP	10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	CHTF18	Q8WVB6	975 aa		10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	AURKB	Q96GD4	344 aa	Predicted RBP	10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	ACAT2	Q9BWD1	397 aa		10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	SLC17A9	Q9BYT1	436 aa		10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	ANKRD60	Q9BZ19	345 aa		10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	PITHD1	Q9GZP4	211 aa	Predicted RBP	10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	ZNF696	Q9H7X3	374 aa		10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	KAT8	Q9H7Z6	458 aa	Known RBP	10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	CAAP1	Q9H8G2	361 aa		10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	MYNN	Q9NPC7	610 aa		10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	ADPRHL2	Q9NX46	363 aa		10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	FZD4	Q9ULV1	537 aa		10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	PADI4	Q9UM07	663 aa		10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	CFAP20	Q9Y6A4	193 aa	Known RBP	10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	SMIM31	A0A1B0GVY4	71 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006		G3V2T6	193 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	PDLIM1	O00151	329 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	SAP18	O00422	153 aa	Known RBP	10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	PRKD3	O94806	890 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	SEMA3D	O95025	777 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	PAK4	O96013	591 aa	Predicted RBP	10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	TGFB1	P01137	390 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	PIM1	P11309	404 aa	Predicted RBP	10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	ATP6V1B1	P15313	513 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	NPPB	P16860	134 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	CDH2	P19022	906 aa	Predicted RBP	10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	DRD1	P21728	446 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	HTR1B	P28222	390 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	MAT2A	P31153	395 aa	Known RBP	10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	CTH	P32929	405 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	CDKN2C	P42773	168 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	GSTM5	P46439	218 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	ADPRH	P54922	357 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	TAS2R38	P59533	333 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	ESRRG	P62508	458 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	CYP4F2	P78329	520 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	TXNL4A	P83876	142 aa	Known RBP	10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	REEP5	Q00765	189 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	DMPK	Q09013	629 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	TCF15	Q12870	199 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	HTR4	Q13639	388 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	DAG1	Q14118	895 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	PON2	Q15165	354 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	TEAD4	Q15561	434 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	EOGT	Q5NDL2	527 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	CCNYL2	Q5T2Q4	361 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	GCNT6	Q5T4J0	391 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	METRNL	Q641Q3	311 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	IYD	Q6PHW0	289 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	ENPP6	Q6UWR7	440 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	TMEM26	Q6ZUK4	368 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	STK32C	Q86UX6	486 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	FAM124A	Q86V42	546 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	NUDT13	Q86X67	352 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	MSRB3	Q8IXL7	192 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	ZNF786	Q8N393	782 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	FAM47B	Q8NA70	645 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	TP53I13	Q8NBR0	393 aa	Predicted RBP	10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	TSPAN14	Q8NG11	270 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	TTL	Q8NG68	377 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	OR52E4	Q8NGH9	312 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	PNPT1	Q8TCS8	783 aa	Known RBP	10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	NUDT8	Q8WV74	236 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	TMBIM1	Q969X1	311 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	MTERF3	Q96E29	417 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	SIPA1	Q96FS4	1042 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	EGLN2	Q96KS0	407 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	OR2M4	Q96R27	311 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	GABRG3	Q99928	467 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	MYOC	Q99972	504 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	PHF7	Q9BWX1	381 aa	Predicted RBP	10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	ING2	Q9H160	280 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	OR51B5	Q9H339	312 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	C8orf33	Q9H7E9	229 aa	Predicted RBP	10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	MVB12B	Q9H7P6	319 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	VCX3A	Q9NNX9	186 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	SERHL	Q9NQF3	203 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	OLAH	Q9NV23	265 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	KIF17	Q9P2E2	1029 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	SERGEF	Q9UGK8	458 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	KCNK6	Q9Y257	313 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	TSC22D4	Q9Y3Q8	395 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	PCDHB11	Q9Y5F2	797 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	PIAS3	Q9Y6X2	628 aa		10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	RIF1	Q5UIP0	2472 aa	Known RBP	10.34	□□□□□ -0.75
SPIDR-222	ENST00000524006	LRRC72	A6NJI9	287 aa		10.33	□□□□□ -0.76
SPIDR-222	ENST00000524006	RNASET2	O00584	256 aa	Known RBP	10.33	□□□□□ -0.76
SPIDR-222	ENST00000524006	NDUFS4	O43181	175 aa		10.33	□□□□□ -0.76
SPIDR-222	ENST00000524006	FKBP9	O95302	570 aa		10.33	□□□□□ -0.76
SPIDR-222	ENST00000524006	KRT75	O95678	551 aa		10.33	□□□□□ -0.76
SPIDR-222	ENST00000524006	SERPIND1	P05546	499 aa		10.33	□□□□□ -0.76
SPIDR-222	ENST00000524006	KLK1	P06870	262 aa		10.33	□□□□□ -0.76
SPIDR-222	ENST00000524006	LINGO3	P0C6S8	592 aa		10.33	□□□□□ -0.76
SPIDR-222	ENST00000524006	THRB	P10828	461 aa		10.33	□□□□□ -0.76
SPIDR-222	ENST00000524006	LAMP1	P11279	417 aa		10.33	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 87 ms