RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 GALNT6Q8NCL4 622 aa17.28■□□□□ 0.36
VEGFA-222ENST00000520948 TCP10LQ8TDR4 215 aa17.28■□□□□ 0.36
VEGFA-222ENST00000520948 ZNF483Q8TF39 744 aaPredicted RBP17.28■□□□□ 0.36
VEGFA-222ENST00000520948 TLCD1Q96CP7 247 aa17.28■□□□□ 0.36
VEGFA-222ENST00000520948 NSUN5Q96P11 429 aaKnown RBP17.28■□□□□ 0.36
VEGFA-222ENST00000520948 NTMT1Q9BV86 223 aa17.28■□□□□ 0.36
VEGFA-222ENST00000520948 ERVK-6Q9BXR3 956 aa17.28■□□□□ 0.36
VEGFA-222ENST00000520948 IPPKQ9H8X2 491 aa17.28■□□□□ 0.36
VEGFA-222ENST00000520948 SLC17A7Q9P2U7 560 aa17.28■□□□□ 0.36
VEGFA-222ENST00000520948 CROTQ9UKG9 612 aa17.28■□□□□ 0.36
VEGFA-222ENST00000520948 TP53TG5Q9Y2B4 290 aa17.28■□□□□ 0.36
VEGFA-222ENST00000520948 FLNCQ14315 2725 aa17.27■□□□□ 0.36
VEGFA-222ENST00000520948 K7EM74 188 aa17.27■□□□□ 0.36
VEGFA-222ENST00000520948 OR7A17O14581 309 aa17.27■□□□□ 0.36
VEGFA-222ENST00000520948 ZSCAN9O15535 394 aaPredicted RBP17.27■□□□□ 0.36
VEGFA-222ENST00000520948 OR1F1O43749 312 aa17.27■□□□□ 0.36
VEGFA-222ENST00000520948 CPNE3O75131 537 aaKnown RBP17.27■□□□□ 0.36
VEGFA-222ENST00000520948 HBQ1P09105 142 aa17.27■□□□□ 0.36
VEGFA-222ENST00000520948 MYL2P10916 166 aa17.27■□□□□ 0.36
VEGFA-222ENST00000520948 CPA3P15088 417 aa17.27■□□□□ 0.36
VEGFA-222ENST00000520948 RORAP35398 523 aa17.27■□□□□ 0.36
VEGFA-222ENST00000520948 AHRP35869 848 aa17.27■□□□□ 0.36
VEGFA-222ENST00000520948 ETV4P43268 484 aa17.27■□□□□ 0.36
VEGFA-222ENST00000520948 PIK3CGP48736 1102 aa17.27■□□□□ 0.36
VEGFA-222ENST00000520948 DNAJB13P59910 316 aa17.27■□□□□ 0.36
VEGFA-222ENST00000520948 ERV3-1Q14264 604 aa17.27■□□□□ 0.36
VEGFA-222ENST00000520948 GRM7Q14831 915 aa17.27■□□□□ 0.36
VEGFA-222ENST00000520948 XKR6Q5GH73 641 aa17.27■□□□□ 0.36
VEGFA-222ENST00000520948 YOD1Q5VVQ6 348 aaPredicted RBP17.27■□□□□ 0.36
VEGFA-222ENST00000520948 RPS27LQ71UM5 84 aaKnown RBP17.27■□□□□ 0.36
VEGFA-222ENST00000520948 ZNF655Q8N720 491 aaPredicted RBP17.27■□□□□ 0.36
VEGFA-222ENST00000520948 L3MBTL4Q8NA19 623 aa17.27■□□□□ 0.36
VEGFA-222ENST00000520948 CCDC126Q96EE4 140 aa17.27■□□□□ 0.36
VEGFA-222ENST00000520948 TMEM237Q96Q45 408 aa17.27■□□□□ 0.36
VEGFA-222ENST00000520948 EFCAB11Q9BUY7 163 aa17.27■□□□□ 0.36
VEGFA-222ENST00000520948 CENPHQ9H3R5 247 aa17.27■□□□□ 0.36
VEGFA-222ENST00000520948 ACTR5Q9H9F9 607 aaPredicted RBP17.27■□□□□ 0.36
VEGFA-222ENST00000520948 AKIRIN1Q9H9L7 192 aaPredicted RBP17.27■□□□□ 0.36
VEGFA-222ENST00000520948 OXSMQ9NWU1 459 aa17.27■□□□□ 0.36
VEGFA-222ENST00000520948 ZFP69BQ9UJL9 534 aa17.27■□□□□ 0.36
VEGFA-222ENST00000520948 KCNMB2Q9Y691 235 aa17.27■□□□□ 0.36
VEGFA-222ENST00000520948 TXNDC9O14530 226 aa17.26■□□□□ 0.35
VEGFA-222ENST00000520948 P2RX6O15547 441 aa17.26■□□□□ 0.35
VEGFA-222ENST00000520948 KATNA1O75449 491 aa17.26■□□□□ 0.35
VEGFA-222ENST00000520948 MED26O95402 600 aa17.26■□□□□ 0.35
VEGFA-222ENST00000520948 FURINP09958 794 aa17.26■□□□□ 0.35
VEGFA-222ENST00000520948 ARSFP54793 590 aa17.26■□□□□ 0.35
VEGFA-222ENST00000520948 IRF8Q02556 426 aa17.26■□□□□ 0.35
VEGFA-222ENST00000520948 GPS2Q13227 327 aa17.26■□□□□ 0.35
VEGFA-222ENST00000520948 LAPTM5Q13571 262 aa17.26■□□□□ 0.35
VEGFA-222ENST00000520948 MPP2Q14168 576 aa17.26■□□□□ 0.35
VEGFA-222ENST00000520948 SLBPQ14493 270 aaKnown RBP eCLIP17.26■□□□□ 0.35
VEGFA-222ENST00000520948 PCLAFQ15004 111 aa17.26■□□□□ 0.35
VEGFA-222ENST00000520948 HKDC1Q2TB90 917 aa17.26■□□□□ 0.35
VEGFA-222ENST00000520948 FAM214AQ32MH5 1076 aa17.26■□□□□ 0.35
VEGFA-222ENST00000520948 LIPJQ5W064 366 aa17.26■□□□□ 0.35
VEGFA-222ENST00000520948 C6orf15Q6UXA7 325 aaPredicted RBP17.26■□□□□ 0.35
VEGFA-222ENST00000520948 TMIGD1Q6UXZ0 262 aa17.26■□□□□ 0.35
VEGFA-222ENST00000520948 LAS2Q8IYD9 372 aa17.26■□□□□ 0.35
VEGFA-222ENST00000520948 DSELQ8IZU8 1212 aa17.26■□□□□ 0.35
VEGFA-222ENST00000520948 ARMC2Q8NEN0 867 aa17.26■□□□□ 0.35
VEGFA-222ENST00000520948 MOCOSQ96EN8 888 aa17.26■□□□□ 0.35
VEGFA-222ENST00000520948 FAM111AQ96PZ2 611 aa17.26■□□□□ 0.35
VEGFA-222ENST00000520948 NOL11Q9H8H0 719 aaKnown RBP17.26■□□□□ 0.35
VEGFA-222ENST00000520948 SRPK3Q9UPE1 567 aa17.26■□□□□ 0.35
VEGFA-222ENST00000520948 RUVBL1Q9Y265 456 aaKnown RBP17.26■□□□□ 0.35
VEGFA-222ENST00000520948 ANGPTL3Q9Y5C1 460 aa17.26■□□□□ 0.35
VEGFA-222ENST00000520948 UQCRHLA0A096LP55 91 aa17.25■□□□□ 0.35
VEGFA-222ENST00000520948 HYKKA2RU49 373 aa17.25■□□□□ 0.35
VEGFA-222ENST00000520948 PPP6CO00743 305 aa17.25■□□□□ 0.35
VEGFA-222ENST00000520948 UGDHO60701 494 aa17.25■□□□□ 0.35
VEGFA-222ENST00000520948 ONECUT2O95948 504 aa17.25■□□□□ 0.35
VEGFA-222ENST00000520948 EIF2S1P05198 315 aaKnown RBP17.25■□□□□ 0.35
VEGFA-222ENST00000520948 UQCRHP07919 91 aa17.25■□□□□ 0.35
VEGFA-222ENST00000520948 CDH13P55290 713 aa17.25■□□□□ 0.35
VEGFA-222ENST00000520948 SNRPNP63162 240 aaKnown RBP17.25■□□□□ 0.35
VEGFA-222ENST00000520948 HYAL2Q12891 473 aa17.25■□□□□ 0.35
VEGFA-222ENST00000520948 TRAF3Q13114 568 aa17.25■□□□□ 0.35
VEGFA-222ENST00000520948 PWP1Q13610 501 aa17.25■□□□□ 0.35
VEGFA-222ENST00000520948 AGBL2Q5U5Z8 902 aa17.25■□□□□ 0.35
VEGFA-222ENST00000520948 GARNL3Q5VVW2 1013 aa17.25■□□□□ 0.35
VEGFA-222ENST00000520948 GRHL2Q6ISB3 625 aa17.25■□□□□ 0.35
VEGFA-222ENST00000520948 ASPGQ86U10 573 aa17.25■□□□□ 0.35
VEGFA-222ENST00000520948 KRT78Q8N1N4 520 aa17.25■□□□□ 0.35
VEGFA-222ENST00000520948 TBC1D19Q8N5T2 526 aa17.25■□□□□ 0.35
VEGFA-222ENST00000520948 CSNK1A1LQ8N752 337 aa17.25■□□□□ 0.35
VEGFA-222ENST00000520948 TTC29Q8NA56 475 aaPredicted RBP17.25■□□□□ 0.35
VEGFA-222ENST00000520948 OR52B6Q8NGF0 335 aa17.25■□□□□ 0.35
VEGFA-222ENST00000520948 NT5CQ8TCD5 201 aa17.25■□□□□ 0.35
VEGFA-222ENST00000520948 CREB3L4Q8TEY5 395 aa17.25■□□□□ 0.35
VEGFA-222ENST00000520948 SLC13A3Q8WWT9 602 aa17.25■□□□□ 0.35
VEGFA-222ENST00000520948 RERGQ96A58 199 aaPredicted RBP17.25■□□□□ 0.35
VEGFA-222ENST00000520948 SEC16BQ96JE7 1060 aa17.25■□□□□ 0.35
VEGFA-222ENST00000520948 C10orf90Q96M02 699 aa17.25■□□□□ 0.35
VEGFA-222ENST00000520948 RUFY1Q96T51 708 aa17.25■□□□□ 0.35
VEGFA-222ENST00000520948 SH3GL2Q99962 352 aa17.25■□□□□ 0.35
VEGFA-222ENST00000520948 IQCGQ9H095 443 aaKnown RBP17.25■□□□□ 0.35
VEGFA-222ENST00000520948 RHBGQ9H310 441 aa17.25■□□□□ 0.35
VEGFA-222ENST00000520948 CUTCQ9NTM9 273 aa17.25■□□□□ 0.35
VEGFA-222ENST00000520948 DHCR7Q9UBM7 475 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms