RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 STXBP1P61764 594 aaKnown RBP14.26□□□□□ -0.13
NUP54-213ENST00000513352 E2F2Q14209 437 aa14.26□□□□□ -0.13
NUP54-213ENST00000513352 MUM1Q2TAK8 710 aa14.26□□□□□ -0.13
NUP54-213ENST00000513352 PRTGQ2VWP7 1150 aa14.26□□□□□ -0.13
NUP54-213ENST00000513352 FAM214AQ32MH5 1076 aa14.26□□□□□ -0.13
NUP54-213ENST00000513352 TCHHL1Q5QJ38 904 aaPredicted RBP14.26□□□□□ -0.13
NUP54-213ENST00000513352 SH2D4BQ5SQS7 431 aa14.26□□□□□ -0.13
NUP54-213ENST00000513352 FRG2Q64ET8 278 aa14.26□□□□□ -0.13
NUP54-213ENST00000513352 ATG16L1Q676U5 607 aa14.26□□□□□ -0.13
NUP54-213ENST00000513352 TTLL10Q6ZVT0 673 aa14.26□□□□□ -0.13
NUP54-213ENST00000513352 LAS2Q8IYD9 372 aa14.26□□□□□ -0.13
NUP54-213ENST00000513352 METTL27Q8N6F8 245 aaPredicted RBP14.26□□□□□ -0.13
NUP54-213ENST00000513352 ARFGAP2Q8N6H7 521 aa14.26□□□□□ -0.13
NUP54-213ENST00000513352 KCT2Q8NC54 265 aa14.26□□□□□ -0.13
NUP54-213ENST00000513352 HUS1BQ8NHY5 278 aa14.26□□□□□ -0.13
NUP54-213ENST00000513352 NT5CQ8TCD5 201 aa14.26□□□□□ -0.13
NUP54-213ENST00000513352 LRRC8CQ8TDW0 803 aa14.26□□□□□ -0.13
NUP54-213ENST00000513352 SELENOMQ8WWX9 145 aa14.26□□□□□ -0.13
NUP54-213ENST00000513352 ZNF285Q96NJ3 590 aa14.26□□□□□ -0.13
NUP54-213ENST00000513352 FRG2BQ96QU4 278 aa14.26□□□□□ -0.13
NUP54-213ENST00000513352 MANSC1Q9H8J5 431 aa14.26□□□□□ -0.13
NUP54-213ENST00000513352 ASCL3Q9NQ33 180 aa14.26□□□□□ -0.13
NUP54-213ENST00000513352 ADGRE2Q9UHX3 823 aa14.26□□□□□ -0.13
NUP54-213ENST00000513352 PCDHB3Q9Y5E6 796 aa14.26□□□□□ -0.13
NUP54-213ENST00000513352 PCDHGA3Q9Y5H0 932 aa14.26□□□□□ -0.13
NUP54-213ENST00000513352 SDK2Q58EX2 2172 aa14.26□□□□□ -0.13
NUP54-213ENST00000513352 CDRT15L2A8MXV6 281 aa14.25□□□□□ -0.13
NUP54-213ENST00000513352 H3BMH7 237 aa14.25□□□□□ -0.13
NUP54-213ENST00000513352 MANBAO00462 879 aa14.25□□□□□ -0.13
NUP54-213ENST00000513352 AZIN1O14977 448 aa14.25□□□□□ -0.13
NUP54-213ENST00000513352 NVLO15381 856 aaKnown RBP14.25□□□□□ -0.13
NUP54-213ENST00000513352 ITM2AO43736 263 aa14.25□□□□□ -0.13
NUP54-213ENST00000513352 CLEC3AO75596 197 aa14.25□□□□□ -0.13
NUP54-213ENST00000513352 CHEK2O96017 543 aa14.25□□□□□ -0.13
NUP54-213ENST00000513352 SERPINA6P08185 405 aa14.25□□□□□ -0.13
NUP54-213ENST00000513352 ZNF888P0CJ79 500 aaPredicted RBP14.25□□□□□ -0.13
NUP54-213ENST00000513352 RAP1GDS1P52306 607 aa14.25□□□□□ -0.13
NUP54-213ENST00000513352 FOXA1P55317 472 aa14.25□□□□□ -0.13
NUP54-213ENST00000513352 RPS13P62277 151 aaKnown RBP14.25□□□□□ -0.13
NUP54-213ENST00000513352 BST1Q10588 318 aa14.25□□□□□ -0.13
NUP54-213ENST00000513352 PWP1Q13610 501 aa14.25□□□□□ -0.13
NUP54-213ENST00000513352 CES4AQ5XG92 561 aa14.25□□□□□ -0.13
NUP54-213ENST00000513352 CLEC6AQ6EIG7 209 aa14.25□□□□□ -0.13
NUP54-213ENST00000513352 SCIMPQ6UWF3 145 aa14.25□□□□□ -0.13
NUP54-213ENST00000513352 VN1R5Q7Z5H4 357 aa14.25□□□□□ -0.13
NUP54-213ENST00000513352 ZFAND4Q86XD8 727 aa14.25□□□□□ -0.13
NUP54-213ENST00000513352 GALNT6Q8NCL4 622 aa14.25□□□□□ -0.13
NUP54-213ENST00000513352 FAM76AQ8TAV0 307 aa14.25□□□□□ -0.13
NUP54-213ENST00000513352 CREB3L4Q8TEY5 395 aa14.25□□□□□ -0.13
NUP54-213ENST00000513352 ZNF473Q8WTR7 871 aaKnown RBP14.25□□□□□ -0.13
NUP54-213ENST00000513352 TM4SF19Q96DZ7 209 aa14.25□□□□□ -0.13
NUP54-213ENST00000513352 SEC16BQ96JE7 1060 aa14.25□□□□□ -0.13
NUP54-213ENST00000513352 C10orf90Q96M02 699 aa14.25□□□□□ -0.13
NUP54-213ENST00000513352 HBEGFQ99075 208 aa14.25□□□□□ -0.13
NUP54-213ENST00000513352 RHBGQ9H310 441 aa14.25□□□□□ -0.13
NUP54-213ENST00000513352 ZNF395Q9H8N7 513 aaPredicted RBP14.25□□□□□ -0.13
NUP54-213ENST00000513352 TNFRSF12AQ9NP84 129 aa14.25□□□□□ -0.13
NUP54-213ENST00000513352 DMRT3Q9NQL9 472 aa14.25□□□□□ -0.13
NUP54-213ENST00000513352 FARSBQ9NSD9 589 aaKnown RBP14.25□□□□□ -0.13
NUP54-213ENST00000513352 PCDHGA7Q9Y5G6 932 aa14.25□□□□□ -0.13
NUP54-213ENST00000513352 A0A0G2JN53 185 aa14.24□□□□□ -0.13
NUP54-213ENST00000513352 TEX51A0A1B0GUA7 166 aa14.24□□□□□ -0.13
NUP54-213ENST00000513352 A0A1B0GX78 115 aa14.24□□□□□ -0.13
NUP54-213ENST00000513352 FITM1A5D6W6 292 aa14.24□□□□□ -0.13
NUP54-213ENST00000513352 MAGEB17A8MXT2 336 aa14.24□□□□□ -0.13
NUP54-213ENST00000513352 STMND1H3BQB6 276 aa14.24□□□□□ -0.13
NUP54-213ENST00000513352 SAP18O00422 153 aaKnown RBP14.24□□□□□ -0.13
NUP54-213ENST00000513352 DSCR3O14972 297 aa14.24□□□□□ -0.13
NUP54-213ENST00000513352 ERI3O43414 337 aaKnown RBP14.24□□□□□ -0.13
NUP54-213ENST00000513352 DXOO77932 396 aaKnown RBP14.24□□□□□ -0.13
NUP54-213ENST00000513352 PDYNP01213 254 aa14.24□□□□□ -0.13
NUP54-213ENST00000513352 UROSP10746 265 aa14.24□□□□□ -0.13
NUP54-213ENST00000513352 IL1RNP18510 177 aa14.24□□□□□ -0.13
NUP54-213ENST00000513352 SERPINB3P29508 390 aa14.24□□□□□ -0.13
NUP54-213ENST00000513352 HNRNPH1P31943 449 aaKnown RBP14.24□□□□□ -0.13
NUP54-213ENST00000513352 PIK3CBP42338 1070 aa14.24□□□□□ -0.13
NUP54-213ENST00000513352 HTR6P50406 440 aa14.24□□□□□ -0.13
NUP54-213ENST00000513352 RAB8AP61006 207 aa14.24□□□□□ -0.13
NUP54-213ENST00000513352 SHC2P98077 582 aa14.24□□□□□ -0.13
NUP54-213ENST00000513352 IMPG1Q17R60 797 aa14.24□□□□□ -0.13
NUP54-213ENST00000513352 YOD1Q5VVQ6 348 aaPredicted RBP14.24□□□□□ -0.13
NUP54-213ENST00000513352 GARNL3Q5VVW2 1013 aa14.24□□□□□ -0.13
NUP54-213ENST00000513352 IGF2-ASQ6U949 168 aa14.24□□□□□ -0.13
NUP54-213ENST00000513352 C6orf15Q6UXA7 325 aaPredicted RBP14.24□□□□□ -0.13
NUP54-213ENST00000513352 CHSY3Q70JA7 882 aa14.24□□□□□ -0.13
NUP54-213ENST00000513352 ABHD13Q7L211 337 aa14.24□□□□□ -0.13
NUP54-213ENST00000513352 DTWD1Q8N5C7 304 aa14.24□□□□□ -0.13
NUP54-213ENST00000513352 RAB3IL1Q8TBN0 382 aa14.24□□□□□ -0.13
NUP54-213ENST00000513352 WDR20Q8TBZ3 569 aa14.24□□□□□ -0.13
NUP54-213ENST00000513352 ZNF75CPQ92670 426 aaPredicted RBP14.24□□□□□ -0.13
NUP54-213ENST00000513352 GAL3ST3Q96A11 431 aa14.24□□□□□ -0.13
NUP54-213ENST00000513352 CMTM7Q96FZ5 175 aa14.24□□□□□ -0.13
NUP54-213ENST00000513352 F2RL3Q96RI0 385 aa14.24□□□□□ -0.13
NUP54-213ENST00000513352 CENPKQ9BS16 269 aa14.24□□□□□ -0.13
NUP54-213ENST00000513352 MS4A8Q9BY19 250 aa14.24□□□□□ -0.13
NUP54-213ENST00000513352 B3GNT4Q9C0J1 378 aa14.24□□□□□ -0.13
NUP54-213ENST00000513352 SLC6A16Q9GZN6 736 aa14.24□□□□□ -0.13
NUP54-213ENST00000513352 REXO4Q9GZR2 422 aaKnown RBP14.24□□□□□ -0.13
NUP54-213ENST00000513352 OR51B5Q9H339 312 aa14.24□□□□□ -0.13
NUP54-213ENST00000513352 KLHL31Q9H511 634 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms