RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 C10orf90Q96M02 699 aa15.22■□□□□ 0.03
SSBP1-214ENST00000498107 FAM111AQ96PZ2 611 aa15.22■□□□□ 0.03
SSBP1-214ENST00000498107 TMEM237Q96Q45 408 aa15.22■□□□□ 0.03
SSBP1-214ENST00000498107 SYNPO2LQ9H987 977 aa15.22■□□□□ 0.03
SSBP1-214ENST00000498107 ANKHQ9HCJ1 492 aa15.22■□□□□ 0.03
SSBP1-214ENST00000498107 ZNF304Q9HCX3 659 aa15.22■□□□□ 0.03
SSBP1-214ENST00000498107 SEMA4BQ9NPR2 832 aaPredicted RBP15.22■□□□□ 0.03
SSBP1-214ENST00000498107 IFT80Q9P2H3 777 aaPredicted RBP15.22■□□□□ 0.03
SSBP1-214ENST00000498107 CROTQ9UKG9 612 aa15.22■□□□□ 0.03
SSBP1-214ENST00000498107 PADI2Q9Y2J8 665 aa15.22■□□□□ 0.03
SSBP1-214ENST00000498107 SSUH2Q9Y2M2 353 aa15.22■□□□□ 0.03
SSBP1-214ENST00000498107 TSC22D4Q9Y3Q8 395 aa15.22■□□□□ 0.03
SSBP1-214ENST00000498107 LOC101059948A0A1B0GTJ6 334 aa15.21■□□□□ 0.03
SSBP1-214ENST00000498107 H0YIG0 161 aa15.21■□□□□ 0.03
SSBP1-214ENST00000498107 H0YIV9 168 aa15.21■□□□□ 0.03
SSBP1-214ENST00000498107 OR7A17O14581 309 aa15.21■□□□□ 0.03
SSBP1-214ENST00000498107 PRAMEF4O60810 478 aa15.21■□□□□ 0.03
SSBP1-214ENST00000498107 ALBP02768 609 aa15.21■□□□□ 0.03
SSBP1-214ENST00000498107 CD22P20273 847 aa15.21■□□□□ 0.03
SSBP1-214ENST00000498107 MC1RQ01726 317 aa15.21■□□□□ 0.03
SSBP1-214ENST00000498107 TLE3Q04726 772 aa15.21■□□□□ 0.03
SSBP1-214ENST00000498107 TGM3Q08188 693 aa15.21■□□□□ 0.03
SSBP1-214ENST00000498107 LCP2Q13094 533 aa15.21■□□□□ 0.03
SSBP1-214ENST00000498107 ST3GAL2Q16842 350 aa15.21■□□□□ 0.03
SSBP1-214ENST00000498107 GGTA1PQ4G0N0 100 aa15.21■□□□□ 0.03
SSBP1-214ENST00000498107 UNC50Q53HI1 259 aa15.21■□□□□ 0.03
SSBP1-214ENST00000498107 PRAMEF9Q5VWM5 478 aa15.21■□□□□ 0.03
SSBP1-214ENST00000498107 LIPMQ5VYY2 423 aa15.21■□□□□ 0.03
SSBP1-214ENST00000498107 CCDC81Q6ZN84 652 aa15.21■□□□□ 0.03
SSBP1-214ENST00000498107 HOMEZQ8IX15 550 aa15.21■□□□□ 0.03
SSBP1-214ENST00000498107 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.21■□□□□ 0.03
SSBP1-214ENST00000498107 CCNYL1Q8N7R7 359 aa15.21■□□□□ 0.03
SSBP1-214ENST00000498107 CREB3L4Q8TEY5 395 aa15.21■□□□□ 0.03
SSBP1-214ENST00000498107 CT55Q8WUE5 264 aa15.21■□□□□ 0.03
SSBP1-214ENST00000498107 CCT6BQ92526 530 aa15.21■□□□□ 0.03
SSBP1-214ENST00000498107 COL26A1Q96A83 441 aa15.21■□□□□ 0.03
SSBP1-214ENST00000498107 FKBP10Q96AY3 582 aa15.21■□□□□ 0.03
SSBP1-214ENST00000498107 SLC6A16Q9GZN6 736 aa15.21■□□□□ 0.03
SSBP1-214ENST00000498107 TMBIM4Q9HC24 238 aa15.21■□□□□ 0.03
SSBP1-214ENST00000498107 ZBTB26Q9HCK0 441 aa15.21■□□□□ 0.03
SSBP1-214ENST00000498107 ZNF490Q9ULM2 529 aaPredicted RBP15.21■□□□□ 0.03
SSBP1-214ENST00000498107 FARSAQ9Y285 508 aaKnown RBP15.21■□□□□ 0.03
SSBP1-214ENST00000498107 PCDHGA6Q9Y5G7 932 aa15.21■□□□□ 0.03
SSBP1-214ENST00000498107 CACNA1BQ00975 2339 aa15.21■□□□□ 0.02
SSBP1-214ENST00000498107 ASPMQ8IZT6 3477 aa15.2■□□□□ 0.02
SSBP1-214ENST00000498107 A0A088AWK7 358 aa15.2■□□□□ 0.02
SSBP1-214ENST00000498107 SRRM3A6NNA2 597 aaPredicted RBP15.2■□□□□ 0.02
SSBP1-214ENST00000498107 TRIM13O60858 407 aa15.2■□□□□ 0.02
SSBP1-214ENST00000498107 ZWINTO95229 277 aa15.2■□□□□ 0.02
SSBP1-214ENST00000498107 NSA2O95478 260 aaKnown RBP15.2■□□□□ 0.02
SSBP1-214ENST00000498107 PCNAP12004 261 aa15.2■□□□□ 0.02
SSBP1-214ENST00000498107 LIFP15018 202 aa15.2■□□□□ 0.02
SSBP1-214ENST00000498107 ZNF10P21506 573 aaPredicted RBP15.2■□□□□ 0.02
SSBP1-214ENST00000498107 FBLP22087 321 aaKnown RBP15.2■□□□□ 0.02
SSBP1-214ENST00000498107 PIK3CBP42338 1070 aa15.2■□□□□ 0.02
SSBP1-214ENST00000498107 CDH13P55290 713 aa15.2■□□□□ 0.02
SSBP1-214ENST00000498107 PKNOX1P55347 436 aa15.2■□□□□ 0.02
SSBP1-214ENST00000498107 TMPRSS3P57727 454 aa15.2■□□□□ 0.02
SSBP1-214ENST00000498107 CYP4F2P78329 520 aa15.2■□□□□ 0.02
SSBP1-214ENST00000498107 TRAF3Q13114 568 aa15.2■□□□□ 0.02
SSBP1-214ENST00000498107 NCF4Q15080 339 aa15.2■□□□□ 0.02
SSBP1-214ENST00000498107 ARHGAP40Q5TG30 622 aa15.2■□□□□ 0.02
SSBP1-214ENST00000498107 AGBL2Q5U5Z8 902 aa15.2■□□□□ 0.02
SSBP1-214ENST00000498107 FAM199XQ6PEV8 388 aaPredicted RBP15.2■□□□□ 0.02
SSBP1-214ENST00000498107 VASH2Q86V25 355 aa15.2■□□□□ 0.02
SSBP1-214ENST00000498107 ARHGEF39Q8N4T4 335 aa15.2■□□□□ 0.02
SSBP1-214ENST00000498107 KCT2Q8NC54 265 aa15.2■□□□□ 0.02
SSBP1-214ENST00000498107 SRFBP1Q8NEF9 429 aaKnown RBP15.2■□□□□ 0.02
SSBP1-214ENST00000498107 OR7G3Q8NG95 312 aa15.2■□□□□ 0.02
SSBP1-214ENST00000498107 OR52B6Q8NGF0 335 aa15.2■□□□□ 0.02
SSBP1-214ENST00000498107 TRPC4APQ8TEL6 797 aa15.2■□□□□ 0.02
SSBP1-214ENST00000498107 MMABQ96EY8 250 aaPredicted RBP15.2■□□□□ 0.02
SSBP1-214ENST00000498107 SLC45A3Q96JT2 553 aa15.2■□□□□ 0.02
SSBP1-214ENST00000498107 NSUN5Q96P11 429 aaKnown RBP15.2■□□□□ 0.02
SSBP1-214ENST00000498107 ZNF382Q96SR6 550 aa15.2■□□□□ 0.02
SSBP1-214ENST00000498107 CENPKQ9BS16 269 aa15.2■□□□□ 0.02
SSBP1-214ENST00000498107 ACBD3Q9H3P7 528 aa15.2■□□□□ 0.02
SSBP1-214ENST00000498107 CLK4Q9HAZ1 481 aaKnown RBP15.2■□□□□ 0.02
SSBP1-214ENST00000498107 KCNK9Q9NPC2 374 aa15.2■□□□□ 0.02
SSBP1-214ENST00000498107 SLC17A7Q9P2U7 560 aa15.2■□□□□ 0.02
SSBP1-214ENST00000498107 TRPS1Q9UHF7 1281 aa15.2■□□□□ 0.02
SSBP1-214ENST00000498107 NXT1Q9UKK6 140 aaKnown RBP15.2■□□□□ 0.02
SSBP1-214ENST00000498107 RNF11Q9Y3C5 154 aa15.2■□□□□ 0.02
SSBP1-214ENST00000498107 FREM2Q5SZK8 3169 aa15.2■□□□□ 0.02
SSBP1-214ENST00000498107 ZNF891A8MT65 544 aaPredicted RBP15.19■□□□□ 0.02
SSBP1-214ENST00000498107 RECKO95980 971 aa15.19■□□□□ 0.02
SSBP1-214ENST00000498107 STATHP02808 62 aa15.19■□□□□ 0.02
SSBP1-214ENST00000498107 CREB1P16220 341 aa15.19■□□□□ 0.02
SSBP1-214ENST00000498107 ALOX12P18054 663 aa15.19■□□□□ 0.02
SSBP1-214ENST00000498107 PTPN4P29074 926 aa15.19■□□□□ 0.02
SSBP1-214ENST00000498107 NAGLUP54802 743 aa15.19■□□□□ 0.02
SSBP1-214ENST00000498107 IFT88Q13099 833 aa15.19■□□□□ 0.02
SSBP1-214ENST00000498107 DSG2Q14126 1118 aa15.19■□□□□ 0.02
SSBP1-214ENST00000498107 PCLAFQ15004 111 aa15.19■□□□□ 0.02
SSBP1-214ENST00000498107 CPSF6Q16630 551 aaKnown RBP eCLIP15.19■□□□□ 0.02
SSBP1-214ENST00000498107 MLIPQ5VWP3 458 aa15.19■□□□□ 0.02
SSBP1-214ENST00000498107 TTC19Q6DKK2 380 aaPredicted RBP15.19■□□□□ 0.02
SSBP1-214ENST00000498107 FAM198BQ6UWH4 519 aa15.19■□□□□ 0.02
SSBP1-214ENST00000498107 GPRIN3Q6ZVF9 776 aa15.19■□□□□ 0.02
SSBP1-214ENST00000498107 CHSY3Q70JA7 882 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms