RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 PRR7Q8TB68 274 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 DNAJB14Q8TBM8 379 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 SLC5A11Q8WWX8 675 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 TSLPQ969D9 159 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 THAP11Q96EK4 314 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 MAGEB10Q96LZ2 347 aaPredicted RBP10.03□□□□□ -0.8
NELFE-213ENST00000494956 C16orf45Q96MC5 204 aaPredicted RBP10.03□□□□□ -0.8
NELFE-213ENST00000494956 RBBP8Q99708 897 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 COL12A1Q99715 3063 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 TMEM79Q9BSE2 394 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 TGIF2Q9GZN2 237 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 KLHL31Q9H511 634 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 ANKHQ9HCJ1 492 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 CTNNAL1Q9UBT7 734 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 OARD1Q9Y530 152 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 PCDHGA10Q9Y5H3 936 aa10.03□□□□□ -0.8
NELFE-213ENST00000494956 HECTD1Q9ULT8 2610 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 LOC102723996A0A087X1L8 192 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 A0A0G2JN53 185 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 H0YIG0 161 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 PRAMEF4O60810 478 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 IPO13O94829 963 aaKnown RBP10.02□□□□□ -0.81
NELFE-213ENST00000494956 WDR47O94967 919 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 ENO2P09104 434 aaPredicted RBP10.02□□□□□ -0.81
NELFE-213ENST00000494956 SLC35G6P0C7Q6 338 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 CCDC166P0CW27 439 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 C8orf89P0DMQ9 161 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 GRK3P35626 688 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 SCTRP47872 440 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 KCNC1P48547 511 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 RAB8AP61006 207 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 REEP5Q00765 189 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 HYAL2Q12891 473 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 DLG1Q12959 904 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 MFAP5Q13361 173 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 RBBP5Q15291 538 aaKnown RBP10.02□□□□□ -0.81
NELFE-213ENST00000494956 OR4D1Q15615 310 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 KBTBD12Q3ZCT8 623 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 IRAK1BP1Q5VVH5 260 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 PRAMEF9Q5VWM5 478 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 FCRLBQ6BAA4 426 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 ADNP2Q6IQ32 1131 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 NXPE4Q6UWF7 544 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 ISLR2Q6UXK2 745 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 FRA10AC1Q70Z53 315 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 CMC1Q7Z7K0 106 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 HPS6Q86YV9 775 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 CTAGE3PQ8IX95 158 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 KBTBD2Q8IY47 623 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 PPM1NQ8N819 430 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 FBF1Q8TES7 1133 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 PPP4R1Q8TF05 950 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 ATL1Q8WXF7 558 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 EXT2Q93063 718 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 RHBDF1Q96CC6 855 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 MRRFQ96E11 262 aaKnown RBP10.02□□□□□ -0.81
NELFE-213ENST00000494956 IMMP1LQ96LU5 166 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 CYTH2Q99418 400 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 LRRC1Q9BTT6 524 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 ZNF700Q9H0M5 742 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 LRRC4CQ9HCJ2 640 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 LANCL2Q9NS86 450 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 UTP11Q9Y3A2 253 aaKnown RBP10.02□□□□□ -0.81
NELFE-213ENST00000494956 DYRK1BQ9Y463 629 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 ASB1Q9Y576 335 aa10.02□□□□□ -0.81
NELFE-213ENST00000494956 COPG1Q9Y678 874 aaKnown RBP10.02□□□□□ -0.81
NELFE-213ENST00000494956 FAM227AF5H4B4 570 aa10.01□□□□□ -0.81
NELFE-213ENST00000494956 EIF3HO15372 352 aaKnown RBP eCLIP10.01□□□□□ -0.81
NELFE-213ENST00000494956 CHST10O43529 356 aa10.01□□□□□ -0.81
NELFE-213ENST00000494956 MAN1A2O60476 641 aa10.01□□□□□ -0.81
NELFE-213ENST00000494956 GALR3O60755 368 aaPredicted RBP10.01□□□□□ -0.81
NELFE-213ENST00000494956 CD1DP15813 335 aa10.01□□□□□ -0.81
NELFE-213ENST00000494956 SOX11P35716 441 aa10.01□□□□□ -0.81
NELFE-213ENST00000494956 MAGEA4P43358 317 aa10.01□□□□□ -0.81
NELFE-213ENST00000494956 SLC6A12P48065 614 aa10.01□□□□□ -0.81
NELFE-213ENST00000494956 HSPA7P48741 367 aa10.01□□□□□ -0.81
NELFE-213ENST00000494956 SLC12A2P55011 1212 aa10.01□□□□□ -0.81
NELFE-213ENST00000494956 BTG2P78543 158 aa10.01□□□□□ -0.81
NELFE-213ENST00000494956 POU4F1Q01851 419 aa10.01□□□□□ -0.81
NELFE-213ENST00000494956 CDC16Q13042 620 aa10.01□□□□□ -0.81
NELFE-213ENST00000494956 TGFBIQ15582 683 aa10.01□□□□□ -0.81
NELFE-213ENST00000494956 TOR1AIP1Q5JTV8 583 aa10.01□□□□□ -0.81
NELFE-213ENST00000494956 ZNF572Q7Z3I7 529 aaPredicted RBP10.01□□□□□ -0.81
NELFE-213ENST00000494956 CPEB2Q7Z5Q1 589 aaKnown RBP10.01□□□□□ -0.81
NELFE-213ENST00000494956 ANKRD37Q7Z713 158 aa10.01□□□□□ -0.81
NELFE-213ENST00000494956 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.01□□□□□ -0.81
NELFE-213ENST00000494956 AFAP1L2Q8N4X5 818 aa10.01□□□□□ -0.81
NELFE-213ENST00000494956 OR1N1Q8NGS0 311 aa10.01□□□□□ -0.81
NELFE-213ENST00000494956 UTP15Q8TED0 518 aaKnown RBP10.01□□□□□ -0.81
NELFE-213ENST00000494956 METTL21AQ8WXB1 218 aa10.01□□□□□ -0.81
NELFE-213ENST00000494956 TM9SF4Q92544 642 aa10.01□□□□□ -0.81
NELFE-213ENST00000494956 GPR22Q99680 433 aa10.01□□□□□ -0.81
NELFE-213ENST00000494956 CPNE1Q99829 537 aa10.01□□□□□ -0.81
NELFE-213ENST00000494956 SARGQ9BW04 601 aa10.01□□□□□ -0.81
NELFE-213ENST00000494956 DERL2Q9GZP9 239 aa10.01□□□□□ -0.81
NELFE-213ENST00000494956 EPS8L2Q9H6S3 715 aa10.01□□□□□ -0.81
NELFE-213ENST00000494956 PELI2Q9HAT8 420 aa10.01□□□□□ -0.81
NELFE-213ENST00000494956 RIC8BQ9NVN3 520 aa10.01□□□□□ -0.81
NELFE-213ENST00000494956 NSMCE4AQ9NXX6 385 aa10.01□□□□□ -0.81
NELFE-213ENST00000494956 ZFP69BQ9UJL9 534 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms