RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 RDH16O75452 317 aa12.23□□□□□ -0.45
COL5A1-206ENST00000465877 SNRPAP09012 282 aaKnown RBP12.23□□□□□ -0.45
COL5A1-206ENST00000465877 C1GALT1C1LP0DN25 315 aa12.23□□□□□ -0.45
COL5A1-206ENST00000465877 GFAPP14136 432 aa12.23□□□□□ -0.45
COL5A1-206ENST00000465877 EPORP19235 508 aa12.23□□□□□ -0.45
COL5A1-206ENST00000465877 MMP11P24347 488 aa12.23□□□□□ -0.45
COL5A1-206ENST00000465877 CXCR2P25025 360 aa12.23□□□□□ -0.45
COL5A1-206ENST00000465877 RRADP55042 308 aa12.23□□□□□ -0.45
COL5A1-206ENST00000465877 SLC29A2Q14542 456 aa12.23□□□□□ -0.45
COL5A1-206ENST00000465877 NAA30Q147X3 362 aaPredicted RBP12.23□□□□□ -0.45
COL5A1-206ENST00000465877 SETDB1Q15047 1291 aa12.23□□□□□ -0.45
COL5A1-206ENST00000465877 RBBP5Q15291 538 aaKnown RBP12.23□□□□□ -0.45
COL5A1-206ENST00000465877 RBBP7Q16576 425 aa12.23□□□□□ -0.45
COL5A1-206ENST00000465877 LACTB2Q53H82 288 aaPredicted RBP12.23□□□□□ -0.45
COL5A1-206ENST00000465877 ADGRD1Q6QNK2 874 aa12.23□□□□□ -0.45
COL5A1-206ENST00000465877 MED25Q71SY5 747 aa12.23□□□□□ -0.45
COL5A1-206ENST00000465877 PDSS2Q86YH6 399 aa12.23□□□□□ -0.45
COL5A1-206ENST00000465877 ZC3H7AQ8IWR0 971 aaKnown RBP12.23□□□□□ -0.45
COL5A1-206ENST00000465877 AFAP1L2Q8N4X5 818 aa12.23□□□□□ -0.45
COL5A1-206ENST00000465877 TMEM102Q8N9M5 508 aaPredicted RBP12.23□□□□□ -0.45
COL5A1-206ENST00000465877 NT5CQ8TCD5 201 aa12.23□□□□□ -0.45
COL5A1-206ENST00000465877 UBLCP1Q8WVY7 318 aaPredicted RBP12.23□□□□□ -0.45
COL5A1-206ENST00000465877 MTBPQ96DY7 904 aa12.23□□□□□ -0.45
COL5A1-206ENST00000465877 YIPF2Q9BWQ6 316 aa12.23□□□□□ -0.45
COL5A1-206ENST00000465877 CAPS2Q9BXY5 557 aa12.23□□□□□ -0.45
COL5A1-206ENST00000465877 SLC6A16Q9GZN6 736 aa12.23□□□□□ -0.45
COL5A1-206ENST00000465877 SEMA3GQ9NS98 782 aa12.23□□□□□ -0.45
COL5A1-206ENST00000465877 ZNF358Q9NW07 568 aa12.23□□□□□ -0.45
COL5A1-206ENST00000465877 P4HTMQ9NXG6 502 aa12.23□□□□□ -0.45
COL5A1-206ENST00000465877 CPSF2Q9P2I0 782 aaKnown RBP12.23□□□□□ -0.45
COL5A1-206ENST00000465877 OPTCQ9UBM4 332 aa12.23□□□□□ -0.45
COL5A1-206ENST00000465877 NAALAD2Q9Y3Q0 740 aa12.23□□□□□ -0.45
COL5A1-206ENST00000465877 SLC22A7Q9Y694 548 aa12.23□□□□□ -0.45
COL5A1-206ENST00000465877 C4orf51C9J302 202 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 SGK494L7N484 410 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 AGPSO00116 658 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 SOCS6O14544 535 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 PRAMEF4O60810 478 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 KLHL18O94889 574 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 SLU7O95391 586 aaKnown RBP12.22□□□□□ -0.45
COL5A1-206ENST00000465877 IGHEP01854 428 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 ZNF888P0CJ79 500 aaPredicted RBP12.22□□□□□ -0.45
COL5A1-206ENST00000465877 ALOX12P18054 663 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 CD22P20273 847 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 NR1D1P20393 614 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 GSTM2P28161 218 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 ALDH18A1P54886 795 aaKnown RBP12.22□□□□□ -0.45
COL5A1-206ENST00000465877 VSNL1P62760 191 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 SKP1P63208 163 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 HYAL2Q12891 473 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 HERC3Q15034 1050 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 PFKFB4Q16877 469 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 TUBB8Q3ZCM7 444 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 XKR6Q5GH73 641 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 DCAF10Q5QP82 559 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 PRAMEF9Q5VWM5 478 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 TMIGD1Q6UXZ0 262 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 ABHD13Q7L211 337 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 KRT78Q8N1N4 520 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 CLEC1AQ8NC01 280 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 TRPV3Q8NET8 790 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 TTLQ8NG68 377 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.22□□□□□ -0.455e-12■■■■■ 104.3
COL5A1-206ENST00000465877 NACC2Q96BF6 587 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 WDR34Q96EX3 536 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 PTCD3Q96EY7 689 aaKnown RBP12.22□□□□□ -0.45
COL5A1-206ENST00000465877 FER1L6-AS2Q96M78 137 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 EFCAB11Q9BUY7 163 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 SLC25A23Q9BV35 468 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 TGIF2Q9GZN2 237 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 PITHD1Q9GZP4 211 aaPredicted RBP12.22□□□□□ -0.45
COL5A1-206ENST00000465877 ZNF71Q9NQZ8 489 aaPredicted RBP12.22□□□□□ -0.45
COL5A1-206ENST00000465877 C3orf18Q9UK00 162 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 FBXL4Q9UKA2 621 aa12.22□□□□□ -0.45
COL5A1-206ENST00000465877 PCDHGA9Q9Y5G4 932 aaKnown RBP12.22□□□□□ -0.45
COL5A1-206ENST00000465877 IQANK1A0A1B0GTG1 560 aa12.21□□□□□ -0.45
COL5A1-206ENST00000465877 URADA6NGE7 173 aa12.21□□□□□ -0.45
COL5A1-206ENST00000465877 IDSB3KWA1 339 aa12.21□□□□□ -0.45
COL5A1-206ENST00000465877 MAP2K7O14733 419 aa12.21□□□□□ -0.45
COL5A1-206ENST00000465877 KLK8O60259 260 aa12.21□□□□□ -0.45
COL5A1-206ENST00000465877 GALR3O60755 368 aaPredicted RBP12.21□□□□□ -0.45
COL5A1-206ENST00000465877 ALOX12BO75342 701 aa12.21□□□□□ -0.45
COL5A1-206ENST00000465877 H2AFYO75367 372 aaKnown RBP12.21□□□□□ -0.45
COL5A1-206ENST00000465877 CEACAM4O75871 244 aa12.21□□□□□ -0.45
COL5A1-206ENST00000465877 COL6A2P12110 1019 aa12.21□□□□□ -0.45
COL5A1-206ENST00000465877 ACPPP15309 386 aa12.21□□□□□ -0.45
COL5A1-206ENST00000465877 XCR1P46094 333 aa12.21□□□□□ -0.45
COL5A1-206ENST00000465877 EFNA3P52797 238 aa12.21□□□□□ -0.45
COL5A1-206ENST00000465877 IRF8Q02556 426 aa12.21□□□□□ -0.45
COL5A1-206ENST00000465877 C19orf57Q0VDD7 668 aa12.21□□□□□ -0.45
COL5A1-206ENST00000465877 CHIT1Q13231 466 aa12.21□□□□□ -0.45
COL5A1-206ENST00000465877 DOC2AQ14183 400 aa12.21□□□□□ -0.45
COL5A1-206ENST00000465877 E2F2Q14209 437 aa12.21□□□□□ -0.45
COL5A1-206ENST00000465877 DEFB134Q4QY38 66 aa12.21□□□□□ -0.45
COL5A1-206ENST00000465877 PAGE2BQ5JRK9 111 aa12.21□□□□□ -0.45
COL5A1-206ENST00000465877 TOR1AIP1Q5JTV8 583 aa12.21□□□□□ -0.45
COL5A1-206ENST00000465877 LGSNQ5TDP6 509 aa12.21□□□□□ -0.45
COL5A1-206ENST00000465877 ADNP2Q6IQ32 1131 aa12.21□□□□□ -0.45
COL5A1-206ENST00000465877 TCTN3Q6NUS6 607 aa12.21□□□□□ -0.45
COL5A1-206ENST00000465877 PTGR2Q8N8N7 351 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms