RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 GOLGA6L19H0YKK7 550 aa16.07■□□□□ 0.16
UBE2D4-209ENST00000454428 ARNTP27540 789 aa16.07■□□□□ 0.16
UBE2D4-209ENST00000454428 MPP1Q00013 466 aa16.07■□□□□ 0.16
UBE2D4-209ENST00000454428 SNTB1Q13884 538 aaKnown RBP16.07■□□□□ 0.16
UBE2D4-209ENST00000454428 SKOR2Q2VWA4 1001 aaPredicted RBP16.07■□□□□ 0.16
UBE2D4-209ENST00000454428 KLHL38Q2WGJ6 581 aa16.07■□□□□ 0.16
UBE2D4-209ENST00000454428 ARHGAP11AQ6P4F7 1023 aa16.07■□□□□ 0.16
UBE2D4-209ENST00000454428 PPP1R21Q6ZMI0 780 aa16.07■□□□□ 0.16
UBE2D4-209ENST00000454428 ACAD11Q709F0 780 aa16.07■□□□□ 0.16
UBE2D4-209ENST00000454428 MDGA2Q7Z553 956 aa16.07■□□□□ 0.16
UBE2D4-209ENST00000454428 BIVMQ86UB2 503 aa16.07■□□□□ 0.16
UBE2D4-209ENST00000454428 PRIMA1Q86XR5 153 aa16.07■□□□□ 0.16
UBE2D4-209ENST00000454428 NFAM1Q8NET5 270 aaPredicted RBP16.07■□□□□ 0.16
UBE2D4-209ENST00000454428 WFDC11Q8NEX6 87 aa16.07■□□□□ 0.16
UBE2D4-209ENST00000454428 ZCCHC10Q8TBK6 192 aa16.07■□□□□ 0.16
UBE2D4-209ENST00000454428 MCOLN3Q8TDD5 553 aa16.07■□□□□ 0.16
UBE2D4-209ENST00000454428 LPGAT1Q92604 370 aa16.07■□□□□ 0.16
UBE2D4-209ENST00000454428 TMEM125Q96AQ2 219 aa16.07■□□□□ 0.16
UBE2D4-209ENST00000454428 MBD6Q96DN6 1003 aa16.07■□□□□ 0.16
UBE2D4-209ENST00000454428 ARSGQ96EG1 525 aa16.07■□□□□ 0.16
UBE2D4-209ENST00000454428 CLEC4MQ9H2X3 399 aaPredicted RBP16.07■□□□□ 0.16
UBE2D4-209ENST00000454428 RASSF1Q9NS23 344 aa16.07■□□□□ 0.16
UBE2D4-209ENST00000454428 PNPLA3Q9NST1 481 aa16.07■□□□□ 0.16
UBE2D4-209ENST00000454428 SH2B3Q9UQQ2 575 aa16.07■□□□□ 0.16
UBE2D4-209ENST00000454428 NAALAD2Q9Y3Q0 740 aa16.07■□□□□ 0.16
UBE2D4-209ENST00000454428 CSPG4Q6UVK1 2322 aa16.06■□□□□ 0.16
UBE2D4-209ENST00000454428 ZNF860A6NHJ4 632 aa16.06■□□□□ 0.16
UBE2D4-209ENST00000454428 KIF5CO60282 957 aa16.06■□□□□ 0.16
UBE2D4-209ENST00000454428 NDUFS3O75489 264 aa16.06■□□□□ 0.16
UBE2D4-209ENST00000454428 GAS8O95995 478 aa16.06■□□□□ 0.16
UBE2D4-209ENST00000454428 DNASE1P24855 282 aa16.06■□□□□ 0.16
UBE2D4-209ENST00000454428 FMO4P31512 558 aa16.06■□□□□ 0.16
UBE2D4-209ENST00000454428 HSD17B2P37059 387 aa16.06■□□□□ 0.16
UBE2D4-209ENST00000454428 GPR85P60893 370 aa16.06■□□□□ 0.16
UBE2D4-209ENST00000454428 RTL6Q6ICC9 239 aa16.06■□□□□ 0.16
UBE2D4-209ENST00000454428 ARSKQ6UWY0 536 aa16.06■□□□□ 0.16
UBE2D4-209ENST00000454428 MPP5Q8N3R9 675 aa16.06■□□□□ 0.16
UBE2D4-209ENST00000454428 RMND5BQ96G75 393 aaPredicted RBP16.06■□□□□ 0.16
UBE2D4-209ENST00000454428 PWWP2AQ96N64 755 aa16.06■□□□□ 0.16
UBE2D4-209ENST00000454428 OR1F2PQ96R84 312 aa16.06■□□□□ 0.16
UBE2D4-209ENST00000454428 EBNA1BP2Q99848 306 aaKnown RBP16.06■□□□□ 0.16
UBE2D4-209ENST00000454428 DEFB127Q9H1M4 99 aa16.06■□□□□ 0.16
UBE2D4-209ENST00000454428 ANKHQ9HCJ1 492 aa16.06■□□□□ 0.16
UBE2D4-209ENST00000454428 DEPPQ9NTK1 212 aa16.06■□□□□ 0.16
UBE2D4-209ENST00000454428 PCDHA13Q9Y5I0 950 aa16.06■□□□□ 0.16
UBE2D4-209ENST00000454428 FAM215AQ9Y5M1 114 aa16.06■□□□□ 0.16
UBE2D4-209ENST00000454428 COL6A5A8TX70 2615 aa16.05■□□□□ 0.16
UBE2D4-209ENST00000454428 A0A0G2JNJ9 132 aa16.05■□□□□ 0.16
UBE2D4-209ENST00000454428 PINLYPA6NC86 204 aa16.05■□□□□ 0.16
UBE2D4-209ENST00000454428 KIAA1324LA8MWY0 1029 aaPredicted RBP16.05■□□□□ 0.16
UBE2D4-209ENST00000454428 KLRC4-KLRK1H3BQV0 150 aa16.05■□□□□ 0.16
UBE2D4-209ENST00000454428 LCMT2O60294 686 aaKnown RBP16.05■□□□□ 0.16
UBE2D4-209ENST00000454428 COILP38432 576 aaPredicted RBP16.05■□□□□ 0.16
UBE2D4-209ENST00000454428 RPS15AP62244 130 aaKnown RBP16.05■□□□□ 0.16
UBE2D4-209ENST00000454428 CRADDP78560 199 aa16.05■□□□□ 0.16
UBE2D4-209ENST00000454428 TYSND1Q2T9J0 566 aa16.05■□□□□ 0.16
UBE2D4-209ENST00000454428 GXYLT1Q4G148 440 aa16.05■□□□□ 0.16
UBE2D4-209ENST00000454428 TMEM198Q66K66 360 aa16.05■□□□□ 0.16
UBE2D4-209ENST00000454428 PRUNE1Q86TP1 453 aa16.05■□□□□ 0.16
UBE2D4-209ENST00000454428 CDC20BQ86Y33 519 aa16.05■□□□□ 0.16
UBE2D4-209ENST00000454428 REXO1L1PQ8IX06 675 aa16.05■□□□□ 0.16
UBE2D4-209ENST00000454428 OR5M3Q8NGP4 307 aa16.05■□□□□ 0.16
UBE2D4-209ENST00000454428 SLC30A3Q99726 388 aa16.05■□□□□ 0.16
UBE2D4-209ENST00000454428 TTYH2Q9BSA4 534 aa16.05■□□□□ 0.16
UBE2D4-209ENST00000454428 FAM114A2Q9NRY5 505 aa16.05■□□□□ 0.16
UBE2D4-209ENST00000454428 TMEM184CQ9NVA4 438 aa16.05■□□□□ 0.16
UBE2D4-209ENST00000454428 Q9UFV3 132 aa16.05■□□□□ 0.16
UBE2D4-209ENST00000454428 DUSP10Q9Y6W6 482 aa16.05■□□□□ 0.16
UBE2D4-209ENST00000454428 NPIPA2E9PIF3 369 aa16.04■□□□□ 0.16
UBE2D4-209ENST00000454428 NPIPA3F8WFD2 350 aa16.04■□□□□ 0.16
UBE2D4-209ENST00000454428 CATP04040 527 aaKnown RBP16.04■□□□□ 0.16
UBE2D4-209ENST00000454428 TPM3P06753 285 aa16.04■□□□□ 0.16
UBE2D4-209ENST00000454428 FHP07954 510 aa16.04■□□□□ 0.16
UBE2D4-209ENST00000454428 GLI4P10075 376 aa16.04■□□□□ 0.16
UBE2D4-209ENST00000454428 NMBRP28336 390 aa16.04■□□□□ 0.16
UBE2D4-209ENST00000454428 IMPA1P29218 277 aa16.04■□□□□ 0.16
UBE2D4-209ENST00000454428 ADH7P40394 386 aa16.04■□□□□ 0.16
UBE2D4-209ENST00000454428 SLC26A11Q86WA9 606 aa16.04■□□□□ 0.16
UBE2D4-209ENST00000454428 KRTAP1-3Q8IUG1 177 aa16.04■□□□□ 0.16
UBE2D4-209ENST00000454428 AFAP1L2Q8N4X5 818 aa16.04■□□□□ 0.16
UBE2D4-209ENST00000454428 FBXO15Q8NCQ5 510 aaPredicted RBP16.04■□□□□ 0.16
UBE2D4-209ENST00000454428 PPHLN1Q8NEY8 458 aaKnown RBP16.04■□□□□ 0.16
UBE2D4-209ENST00000454428 OR5M9Q8NGP3 310 aa16.04■□□□□ 0.16
UBE2D4-209ENST00000454428 CRIM1Q9NZV1 1036 aa16.04■□□□□ 0.16
UBE2D4-209ENST00000454428 ZANQ9Y493 2812 aa16.03■□□□□ 0.16
UBE2D4-209ENST00000454428 SAGE2PA6NJ88 616 aa16.03■□□□□ 0.16
UBE2D4-209ENST00000454428 ZNF839A8K0R7 811 aa16.03■□□□□ 0.16
UBE2D4-209ENST00000454428 IL10P22301 178 aa16.03■□□□□ 0.16
UBE2D4-209ENST00000454428 ACVR2AP27037 513 aa16.03■□□□□ 0.16
UBE2D4-209ENST00000454428 ZFP36L2P47974 494 aaKnown RBP16.03■□□□□ 0.16
UBE2D4-209ENST00000454428 BTG2P78543 158 aa16.03■□□□□ 0.16
UBE2D4-209ENST00000454428 PCID2Q5JVF3 399 aa16.03■□□□□ 0.16
UBE2D4-209ENST00000454428 LRRC57Q8N9N7 239 aa16.03■□□□□ 0.16
UBE2D4-209ENST00000454428 CAMKVQ8NCB2 501 aa16.03■□□□□ 0.16
UBE2D4-209ENST00000454428 APCDD1LQ8NCL9 501 aa16.03■□□□□ 0.16
UBE2D4-209ENST00000454428 OR10Q1Q8NGQ4 319 aa16.03■□□□□ 0.16
UBE2D4-209ENST00000454428 GIMAP7Q8NHV1 300 aa16.03■□□□□ 0.16
UBE2D4-209ENST00000454428 ATG4AQ8WYN0 398 aa16.03■□□□□ 0.16
UBE2D4-209ENST00000454428 TBC1D20Q96BZ9 403 aa16.03■□□□□ 0.16
UBE2D4-209ENST00000454428 THAP11Q96EK4 314 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms