RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 VEGFCP49767 419 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 ADPRHP54922 357 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 ADKP55263 362 aaKnown RBP4.81□□□□□ -1.64
EPHA3-202ENST00000452448 MAZP56270 477 aaKnown RBP4.81□□□□□ -1.64
EPHA3-202ENST00000452448 KCNQ4P56696 695 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 GPC5P78333 572 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 SRSF2Q01130 221 aaKnown RBP4.81□□□□□ -1.64
EPHA3-202ENST00000452448 CKAP4Q07065 602 aaKnown RBP4.81□□□□□ -1.64
EPHA3-202ENST00000452448 IL18R1Q13478 541 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 SLC12A1Q13621 1099 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 TBCEQ15813 527 aaPredicted RBP4.81□□□□□ -1.64
EPHA3-202ENST00000452448 SLC18A3Q16572 532 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 LDLRAP1Q5SW96 308 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 PRAMEF5Q5TYX0 476 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 HACD4Q5VWC8 232 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 PRAMEF9Q5VWM5 478 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 PRAMEF6Q5VXH4 476 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 LPCAT4Q643R3 524 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 ATG9BQ674R7 924 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 CIAPIN1Q6FI81 312 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 EFCAB12Q6NXP0 572 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 C11orf57Q6ZUT1 292 aaPredicted RBP4.81□□□□□ -1.64
EPHA3-202ENST00000452448 TRIM46Q7Z4K8 759 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 GPAT4Q86UL3 456 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 RTN4RL1Q86UN2 441 aaPredicted RBP4.81□□□□□ -1.64
EPHA3-202ENST00000452448 SLC35F3Q8IY50 421 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 GCNT2Q8N0V5 402 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 OR4M2Q8NGB6 313 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 OR52N2Q8NGI0 321 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 OR6Y1Q8NGX8 325 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 FAM172AQ8WUF8 416 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 SFT2D1Q8WV19 159 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 RAB24Q969Q5 203 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 EAF2Q96CJ1 260 aaPredicted RBP4.81□□□□□ -1.64
EPHA3-202ENST00000452448 APIPQ96GX9 242 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 SH3YL1Q96HL8 342 aaPredicted RBP4.81□□□□□ -1.64
EPHA3-202ENST00000452448 C12orf66Q96MD2 445 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 KLHL32Q96NJ5 620 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 C11orf70Q9BRQ4 267 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 CPEB1Q9BZB8 566 aaKnown RBP4.81□□□□□ -1.64
EPHA3-202ENST00000452448 CCDC134Q9H6E4 229 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 TMLHEQ9NVH6 421 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 PARPBPQ9NWS1 579 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 IFNKQ9P0W0 207 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 COPZ2Q9P299 210 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 TMEM59LQ9UK28 342 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 TCFL5Q9UL49 500 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 CHKBQ9Y259 395 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 FNDC3AQ9Y2H6 1198 aaKnown RBP4.81□□□□□ -1.64
EPHA3-202ENST00000452448 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.81□□□□□ -1.64
EPHA3-202ENST00000452448 KCNK7Q9Y2U2 307 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 POLR3HQ9Y535 204 aaPredicted RBP4.81□□□□□ -1.64
EPHA3-202ENST00000452448 HSPE1-MOB4S4R3N1 261 aa4.81□□□□□ -1.64
EPHA3-202ENST00000452448 NFAT5O94916 1531 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 COL14A1Q05707 1796 aaKnown RBP4.8□□□□□ -1.64
EPHA3-202ENST00000452448 A0A0D9SFI3 127 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 A0A1W2PQ27 194 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 A0A1W2PQ64 194 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 A0A1W2PQD8 194 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 G3V2T6 193 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 M0R296 226 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 CES2O00748 559 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 SNX3O60493 162 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 ITGA10O75578 1167 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 RGS9O75916 674 aaPredicted RBP4.8□□□□□ -1.64
EPHA3-202ENST00000452448 SLC22A5O76082 557 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 MMP10P09238 476 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 OR2T7P0C7T2 308 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 INSRRP14616 1297 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 MUC1P15941 1255 aaPredicted RBP4.8□□□□□ -1.64
EPHA3-202ENST00000452448 PNLIPP16233 465 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 MARK3P27448 753 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 ACADLP28330 430 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 ECHS1P30084 290 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 THBS4P35443 961 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 HPCAL1P37235 193 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 ACOT2P49753 483 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 SUOXP51687 545 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 PRKAA2P54646 552 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 UGT2B15P54855 530 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 ARPP19P56211 112 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 PER3P56645 1201 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 YPEL5P62699 121 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 SIM1P81133 766 aaPredicted RBP4.8□□□□□ -1.64
EPHA3-202ENST00000452448 MRPS11P82912 194 aaKnown RBP4.8□□□□□ -1.64
EPHA3-202ENST00000452448 SP3Q02447 781 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 STX4Q12846 297 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 AQP6Q13520 282 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 APOFQ13790 326 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 KCNJ11Q14654 390 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 SOWAHAQ2M3V2 549 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 ZBED5Q49AG3 693 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 FASTKD1Q53R41 847 aaKnown RBP4.8□□□□□ -1.64
EPHA3-202ENST00000452448 ACSBG2Q5FVE4 666 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 COQ5Q5HYK3 327 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 ATAD3CQ5T2N8 411 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 MARC1Q5VT66 337 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 FSTL4Q6MZW2 842 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 COLCA1Q6ZS62 124 aa4.8□□□□□ -1.64
EPHA3-202ENST00000452448 FAM92BQ6ZTR7 304 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms