RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 ANXA4P09525 319 aaPredicted RBP8.53□□□□□ -1.04
RTN4-206ENST00000394611 HTR1EP28566 365 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 DAPP51397 102 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 DNAJB13P59910 316 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 EMX2Q04743 252 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 TARDBPQ13148 414 aaKnown RBP eCLIP8.53□□□□□ -1.043e-9■■■■■ 47
RTN4-206ENST00000394611 CTF1Q16619 201 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 SPRED1Q7Z699 444 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 FGD2Q7Z6J4 655 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 ADAMTSL2Q86TH1 951 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 ZFAND4Q86XD8 727 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 SLC38A6Q8IZM9 456 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 C3orf58Q8NDZ4 430 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 FOXJ1Q92949 421 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 MUL1Q969V5 352 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 DNAJA3Q96EY1 480 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 FAM129BQ96TA1 746 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 TM9SF2Q99805 663 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 TUBA1CQ9BQE3 449 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 BRD7Q9NPI1 651 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 CCDC177Q9NQR7 707 aaPredicted RBP8.53□□□□□ -1.04
RTN4-206ENST00000394611 STARD7Q9NQZ5 370 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 CLCA2Q9UQC9 943 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 A0A1W2PQL4 384 aaPredicted RBP8.53□□□□□ -1.04
RTN4-206ENST00000394611 ZBTB42B2RXF5 422 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 FGF10O15520 208 aaPredicted RBP8.53□□□□□ -1.04
RTN4-206ENST00000394611 GATBO75879 557 aaKnown RBP8.53□□□□□ -1.04
RTN4-206ENST00000394611 SLITRK5O94991 958 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 FGF1P05230 155 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 CKMP06732 381 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 IL7P13232 177 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 GJA1P17302 382 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 DNAJA1P31689 397 aaKnown RBP8.53□□□□□ -1.04
RTN4-206ENST00000394611 FNTBP49356 437 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 SLC26A2P50443 739 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 FGL2Q14314 439 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 TOR1AIP1Q5JTV8 583 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 C10orf62Q5T681 223 aaPredicted RBP8.53□□□□□ -1.04
RTN4-206ENST00000394611 ZNF438Q7Z4V0 828 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 ELMOD1Q8N336 334 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 YIPF7Q8N8F6 280 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 ZMIZ2Q8NF64 920 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 NFKBIDQ8NI38 313 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 ADAMTS16Q8TE57 1224 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 AKAP1Q92667 903 aaKnown RBP eCLIP8.53□□□□□ -1.04
RTN4-206ENST00000394611 TMCO6Q96DC7 493 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 ZNF419Q96HQ0 510 aaPredicted RBP8.53□□□□□ -1.04
RTN4-206ENST00000394611 TSPAN18Q96SJ8 248 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 MBOAT4Q96T53 435 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 C1QTNF6Q9BXI9 259 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 MMP27Q9H306 513 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 GPN2Q9H9Y4 310 aaPredicted RBP8.53□□□□□ -1.04
RTN4-206ENST00000394611 NTN4Q9HB63 628 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 SMURF1Q9HCE7 757 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 FAM105AQ9NUU6 356 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 ZFP37Q9Y6Q3 630 aaPredicted RBP8.53□□□□□ -1.04
RTN4-206ENST00000394611 C2orf92A0A1B0GVN3 265 aa8.52□□□□□ -1.04
RTN4-206ENST00000394611 HAS3O00219 553 aa8.52□□□□□ -1.04
RTN4-206ENST00000394611 PLD2O14939 933 aa8.52□□□□□ -1.04
RTN4-206ENST00000394611 NME6O75414 186 aaPredicted RBP8.52□□□□□ -1.04
RTN4-206ENST00000394611 EEDO75530 441 aaKnown RBP8.52□□□□□ -1.04
RTN4-206ENST00000394611 GADD45GO95257 159 aa8.52□□□□□ -1.04
RTN4-206ENST00000394611 IGFBP1P08833 259 aaPredicted RBP8.52□□□□□ -1.04
RTN4-206ENST00000394611 PRKACAP17612 351 aa8.52□□□□□ -1.04
RTN4-206ENST00000394611 ALAS2P22557 587 aa8.52□□□□□ -1.04
RTN4-206ENST00000394611 AVPR1BP47901 424 aa8.52□□□□□ -1.04
RTN4-206ENST00000394611 HOXC5Q00444 222 aa8.52□□□□□ -1.04
RTN4-206ENST00000394611 KCNC4Q03721 635 aa8.52□□□□□ -1.04
RTN4-206ENST00000394611 EXOC3L2Q2M3D2 409 aa8.52□□□□□ -1.04
RTN4-206ENST00000394611 TTLL9Q3SXZ7 439 aa8.52□□□□□ -1.04
RTN4-206ENST00000394611 BCL2L15Q5TBC7 163 aa8.52□□□□□ -1.04
RTN4-206ENST00000394611 RANBP10Q6VN20 620 aa8.52□□□□□ -1.04
RTN4-206ENST00000394611 Q6ZSR9 355 aa8.52□□□□□ -1.04
RTN4-206ENST00000394611 BEND5Q7L4P6 421 aa8.52□□□□□ -1.04
RTN4-206ENST00000394611 TRMT11Q7Z4G4 463 aaKnown RBP8.52□□□□□ -1.04
RTN4-206ENST00000394611 ZZZ3Q8IYH5 903 aa8.52□□□□□ -1.04
RTN4-206ENST00000394611 PCSK9Q8NBP7 692 aaKnown RBP8.52□□□□□ -1.04
RTN4-206ENST00000394611 NLGN4YQ8NFZ3 816 aaPredicted RBP8.52□□□□□ -1.04
RTN4-206ENST00000394611 ZNF671Q8TAW3 534 aa8.52□□□□□ -1.04
RTN4-206ENST00000394611 MRPS31Q92665 395 aaKnown RBP8.52□□□□□ -1.04
RTN4-206ENST00000394611 KIAA1191Q96A73 305 aa8.52□□□□□ -1.04
RTN4-206ENST00000394611 ITPKCQ96DU7 683 aa8.52□□□□□ -1.04
RTN4-206ENST00000394611 ARSGQ96EG1 525 aa8.52□□□□□ -1.04
RTN4-206ENST00000394611 CTRCQ99895 268 aa8.52□□□□□ -1.04
RTN4-206ENST00000394611 LRFN2Q9ULH4 789 aa8.52□□□□□ -1.04
RTN4-206ENST00000394611 TRIP12Q14669 1992 aaPredicted RBP8.52□□□□□ -1.05
RTN4-206ENST00000394611 CIB4A0PJX0 185 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 HOXC11O43248 304 aaPredicted RBP8.52□□□□□ -1.05
RTN4-206ENST00000394611 PRSS23O95084 383 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 NDST3O95803 873 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 PRKAR1AP10644 381 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 ETFAP13804 333 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 CST5P28325 142 aaPredicted RBP8.52□□□□□ -1.05
RTN4-206ENST00000394611 HOXA11P31270 313 aaPredicted RBP8.52□□□□□ -1.05
RTN4-206ENST00000394611 EIF2DP41214 584 aaKnown RBP8.52□□□□□ -1.05
RTN4-206ENST00000394611 RPL35P42766 123 aaKnown RBP8.52□□□□□ -1.05
RTN4-206ENST00000394611 GPLD1P80108 840 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 DEFA5Q01523 94 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 CPTPQ5TA50 214 aa8.52□□□□□ -1.05
RTN4-206ENST00000394611 PAQR6Q6TCH4 344 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms