RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 SLC46A3Q7Z3Q1 461 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 THOC6Q86W42 341 aaKnown RBP17.29■□□□□ 0.36
PHF1-201ENST00000374512 PSMA8Q8TAA3 256 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 HPS1Q92902 700 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 CRELD1Q96HD1 420 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 ATG10Q9H0Y0 220 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 PCDH12Q9NPG4 1184 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 ENOPH1Q9UHY7 261 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 HS3ST2Q9Y278 367 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 HTR3EA5X5Y0 456 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 GABRR3A8MPY1 467 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 ZBBXA8MT70 800 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 M0R082 166 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 QSOX1O00391 747 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 PLK4O00444 970 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 RNASET2O00584 256 aaKnown RBP17.29■□□□□ 0.36
PHF1-201ENST00000374512 SLCO2B1O94956 709 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 C1QCP02747 245 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 CCL5P13501 91 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 ITGA2P17301 1181 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 CD22P20273 847 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 MAPK9P45984 424 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 POLR2LP62875 67 aaKnown RBP17.29■□□□□ 0.36
PHF1-201ENST00000374512 PRKCDQ05655 676 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 RBBP4Q09028 425 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 GPR153Q6NV75 609 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 GAREM2Q75VX8 874 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 DDX53Q86TM3 631 aaKnown RBP17.29■□□□□ 0.36
PHF1-201ENST00000374512 SNX29P2Q8IUI4 249 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 LYSMD2Q8IV50 215 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 VWCEQ96DN2 955 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 COL21A1Q96P44 957 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 SAGE1Q9NXZ1 904 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 TMPRSS11EQ9UL52 423 aa17.29■□□□□ 0.36
PHF1-201ENST00000374512 MN1Q10571 1320 aaPredicted RBP17.29■□□□□ 0.36
PHF1-201ENST00000374512 YY2O15391 372 aa17.28■□□□□ 0.36
PHF1-201ENST00000374512 POP4O95707 220 aaKnown RBP17.28■□□□□ 0.36
PHF1-201ENST00000374512 C1SP09871 688 aa17.28■□□□□ 0.36
PHF1-201ENST00000374512 STK19P49842 368 aaPredicted RBP17.28■□□□□ 0.36
PHF1-201ENST00000374512 PNLIPRP1P54315 467 aa17.28■□□□□ 0.36
PHF1-201ENST00000374512 PPIGQ13427 754 aaKnown RBP eCLIP17.28■□□□□ 0.368e-8■■■■■ 28.5
PHF1-201ENST00000374512 DOC2AQ14183 400 aa17.28■□□□□ 0.36
PHF1-201ENST00000374512 PNCKQ6P2M8 343 aa17.28■□□□□ 0.36
PHF1-201ENST00000374512 GOT1L1Q8NHS2 421 aaPredicted RBP17.28■□□□□ 0.36
PHF1-201ENST00000374512 FEVQ99581 238 aa17.28■□□□□ 0.36
PHF1-201ENST00000374512 SPG21Q9NZD8 308 aa17.28■□□□□ 0.36
PHF1-201ENST00000374512 NDUFAF4Q9P032 175 aa17.28■□□□□ 0.36
PHF1-201ENST00000374512 ZNF229Q9UJW7 825 aa17.28■□□□□ 0.36
PHF1-201ENST00000374512 TBX21Q9UL17 535 aa17.28■□□□□ 0.36
PHF1-201ENST00000374512 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.28■□□□□ 0.36
PHF1-201ENST00000374512 BNIP3LO60238 219 aa17.28■□□□□ 0.36
PHF1-201ENST00000374512 PSIP1O75475 530 aaKnown RBP17.28■□□□□ 0.36
PHF1-201ENST00000374512 PTTG1O95997 202 aa17.28■□□□□ 0.36
PHF1-201ENST00000374512 SRPRAP08240 638 aaKnown RBP17.28■□□□□ 0.36
PHF1-201ENST00000374512 ANXA4P09525 319 aaPredicted RBP17.28■□□□□ 0.36
PHF1-201ENST00000374512 LAG3P18627 525 aa17.28■□□□□ 0.36
PHF1-201ENST00000374512 CTSOP43234 321 aaPredicted RBP17.28■□□□□ 0.36
PHF1-201ENST00000374512 CD300CQ08708 224 aa17.28■□□□□ 0.36
PHF1-201ENST00000374512 SYT16Q17RD7 645 aa17.28■□□□□ 0.36
PHF1-201ENST00000374512 C10orf62Q5T681 223 aaPredicted RBP17.28■□□□□ 0.36
PHF1-201ENST00000374512 C22orf39Q6P5X5 142 aa17.28■□□□□ 0.36
PHF1-201ENST00000374512 ZNF605Q86T29 641 aa17.28■□□□□ 0.36
PHF1-201ENST00000374512 C9orf43Q8TAL5 461 aaPredicted RBP17.28■□□□□ 0.36
PHF1-201ENST00000374512 ELMO1Q92556 727 aa17.28■□□□□ 0.36
PHF1-201ENST00000374512 GGHQ92820 318 aa17.28■□□□□ 0.36
PHF1-201ENST00000374512 SLC35B4Q969S0 331 aa17.28■□□□□ 0.36
PHF1-201ENST00000374512 TIFAQ96CG3 184 aa17.28■□□□□ 0.36
PHF1-201ENST00000374512 TXNDC15Q96J42 360 aa17.28■□□□□ 0.36
PHF1-201ENST00000374512 KCNC2Q96PR1 638 aa17.28■□□□□ 0.36
PHF1-201ENST00000374512 MTERF1Q99551 399 aaKnown RBP17.28■□□□□ 0.36
PHF1-201ENST00000374512 FAM83CQ9BQN1 747 aa17.28■□□□□ 0.36
PHF1-201ENST00000374512 BHLHE41Q9C0J9 482 aaPredicted RBP17.28■□□□□ 0.36
PHF1-201ENST00000374512 ABCG8Q9H221 673 aa17.28■□□□□ 0.36
PHF1-201ENST00000374512 BRD9Q9H8M2 597 aa17.28■□□□□ 0.36
PHF1-201ENST00000374512 ZBTB20Q9HC78 741 aaPredicted RBP17.28■□□□□ 0.36
PHF1-201ENST00000374512 THSD1Q9NS62 852 aa17.28■□□□□ 0.36
PHF1-201ENST00000374512 PNMA8BQ9ULN7 279 aaPredicted RBP17.28■□□□□ 0.36
PHF1-201ENST00000374512 BTBD3Q9Y2F9 522 aa17.28■□□□□ 0.36
PHF1-201ENST00000374512 LTBP2Q14767 1821 aa17.27■□□□□ 0.36
PHF1-201ENST00000374512 NUP214P35658 2090 aaPredicted RBP17.27■□□□□ 0.36
PHF1-201ENST00000374512 MGAT4DA6NG13 374 aa17.27■□□□□ 0.36
PHF1-201ENST00000374512 TMEM229AB2RXF0 380 aa17.27■□□□□ 0.36
PHF1-201ENST00000374512 TEX28O15482 410 aa17.27■□□□□ 0.36
PHF1-201ENST00000374512 ZNF30P17039 623 aa17.27■□□□□ 0.36
PHF1-201ENST00000374512 POLR2EP19388 210 aaKnown RBP17.27■□□□□ 0.36
PHF1-201ENST00000374512 IDSP22304 550 aa17.27■□□□□ 0.36
PHF1-201ENST00000374512 S100A5P33763 92 aa17.27■□□□□ 0.36
PHF1-201ENST00000374512 IFI44LQ53G44 452 aa17.27■□□□□ 0.36
PHF1-201ENST00000374512 OR10G2Q8NGC3 310 aa17.27■□□□□ 0.36
PHF1-201ENST00000374512 KLHL25Q9H0H3 589 aa17.27■□□□□ 0.36
PHF1-201ENST00000374512 RC3H2Q9HBD1 1191 aaKnown RBP17.27■□□□□ 0.36
PHF1-201ENST00000374512 PCDHGA2Q9Y5H1 932 aa17.27■□□□□ 0.36
PHF1-201ENST00000374512 KLK4Q9Y5K2 254 aa17.27■□□□□ 0.36
PHF1-201ENST00000374512 ABHD14A-ACY1A0A1B0GW23 586 aa17.27■□□□□ 0.35
PHF1-201ENST00000374512 NUDT7P0C024 238 aa17.27■□□□□ 0.35
PHF1-201ENST00000374512 GADD45AP24522 165 aa17.27■□□□□ 0.35
PHF1-201ENST00000374512 C21orf33P30042 268 aaPredicted RBP17.27■□□□□ 0.35
PHF1-201ENST00000374512 DCDC1P59894 354 aa17.27■□□□□ 0.35
PHF1-201ENST00000374512 RAE1P78406 368 aaKnown RBP17.27■□□□□ 0.35
PHF1-201ENST00000374512 BCL2A1Q16548 175 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms