RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 UMODP07911 640 aa17.57■□□□□ 0.4
CHTOP-202ENST00000368687 MTHFD2P13995 350 aa17.57■□□□□ 0.4
CHTOP-202ENST00000368687 EPB42P16452 691 aa17.57■□□□□ 0.4
CHTOP-202ENST00000368687 ZNF10P21506 573 aaPredicted RBP17.57■□□□□ 0.4
CHTOP-202ENST00000368687 SERPINB1P30740 379 aa17.57■□□□□ 0.4
CHTOP-202ENST00000368687 CASP2P42575 452 aa17.57■□□□□ 0.4
CHTOP-202ENST00000368687 KCNC1P48547 511 aa17.57■□□□□ 0.4
CHTOP-202ENST00000368687 MEF2AQ02078 507 aaPredicted RBP17.57■□□□□ 0.4
CHTOP-202ENST00000368687 IRF8Q02556 426 aa17.57■□□□□ 0.4
CHTOP-202ENST00000368687 C19orf57Q0VDD7 668 aa17.57■□□□□ 0.4
CHTOP-202ENST00000368687 NAA30Q147X3 362 aaPredicted RBP17.57■□□□□ 0.4
CHTOP-202ENST00000368687 RBBP5Q15291 538 aaKnown RBP17.57■□□□□ 0.4
CHTOP-202ENST00000368687 XKR6Q5GH73 641 aa17.57■□□□□ 0.4
CHTOP-202ENST00000368687 TECRLQ5HYJ1 363 aa17.57■□□□□ 0.4
CHTOP-202ENST00000368687 GSPT2Q8IYD1 628 aaKnown RBP17.57■□□□□ 0.4
CHTOP-202ENST00000368687 AMER3Q8N944 861 aa17.57■□□□□ 0.4
CHTOP-202ENST00000368687 EXD3Q8N9H8 876 aa17.57■□□□□ 0.4
CHTOP-202ENST00000368687 CLEC1AQ8NC01 280 aa17.57■□□□□ 0.4
CHTOP-202ENST00000368687 C9orf43Q8TAL5 461 aaPredicted RBP17.57■□□□□ 0.4
CHTOP-202ENST00000368687 UBLCP1Q8WVY7 318 aaPredicted RBP17.57■□□□□ 0.4
CHTOP-202ENST00000368687 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.57■□□□□ 0.4
CHTOP-202ENST00000368687 MRPL57Q9BQC6 102 aaKnown RBP17.57■□□□□ 0.4
CHTOP-202ENST00000368687 CRB3Q9BUF7 120 aa17.57■□□□□ 0.4
CHTOP-202ENST00000368687 ANGPTL3Q9Y5C1 460 aa17.57■□□□□ 0.4
CHTOP-202ENST00000368687 PCDHGA9Q9Y5G4 932 aaKnown RBP17.57■□□□□ 0.4
CHTOP-202ENST00000368687 GCN1Q92616 2671 aaKnown RBP17.57■□□□□ 0.4
CHTOP-202ENST00000368687 ANKDD1BA6NHY2 528 aa17.56■□□□□ 0.4
CHTOP-202ENST00000368687 AGPSO00116 658 aa17.56■□□□□ 0.4
CHTOP-202ENST00000368687 CNOT3O75175 753 aaKnown RBP17.56■□□□□ 0.4
CHTOP-202ENST00000368687 SMIM24O75264 130 aa17.56■□□□□ 0.4
CHTOP-202ENST00000368687 SERPIND1P05546 499 aa17.56■□□□□ 0.4
CHTOP-202ENST00000368687 TUBBP07437 444 aa17.56■□□□□ 0.4
CHTOP-202ENST00000368687 MYBL2P10244 700 aa17.56■□□□□ 0.4
CHTOP-202ENST00000368687 ALOX12P18054 663 aa17.56■□□□□ 0.4
CHTOP-202ENST00000368687 ATP1A4Q13733 1029 aa17.56■□□□□ 0.4
CHTOP-202ENST00000368687 E2F2Q14209 437 aa17.56■□□□□ 0.4
CHTOP-202ENST00000368687 SLBPQ14493 270 aaKnown RBP eCLIP17.56■□□□□ 0.4
CHTOP-202ENST00000368687 RASA2Q15283 850 aa17.56■□□□□ 0.4
CHTOP-202ENST00000368687 PCBP2Q15366 365 aaKnown RBP eCLIP17.56■□□□□ 0.4
CHTOP-202ENST00000368687 RBBP7Q16576 425 aa17.56■□□□□ 0.4
CHTOP-202ENST00000368687 PFKFB4Q16877 469 aa17.56■□□□□ 0.4
CHTOP-202ENST00000368687 C18orf21Q32NC0 220 aaPredicted RBP17.56■□□□□ 0.4
CHTOP-202ENST00000368687 WDR93Q6P2C0 686 aa17.56■□□□□ 0.4
CHTOP-202ENST00000368687 EMBQ6PCB8 327 aa17.56■□□□□ 0.4
CHTOP-202ENST00000368687 AFAP1L2Q8N4X5 818 aa17.56■□□□□ 0.4
CHTOP-202ENST00000368687 KCT2Q8NC54 265 aa17.56■□□□□ 0.4
CHTOP-202ENST00000368687 ZNF740Q8NDX6 193 aa17.56■□□□□ 0.4
CHTOP-202ENST00000368687 SCYL1Q96KG9 808 aa17.56■□□□□ 0.4
CHTOP-202ENST00000368687 YIPF2Q9BWQ6 316 aa17.56■□□□□ 0.4
CHTOP-202ENST00000368687 SLC6A16Q9GZN6 736 aa17.56■□□□□ 0.4
CHTOP-202ENST00000368687 MRPL46Q9H2W6 279 aaKnown RBP17.56■□□□□ 0.4
CHTOP-202ENST00000368687 EPB41L4BQ9H329 900 aa17.56■□□□□ 0.4
CHTOP-202ENST00000368687 P4HTMQ9NXG6 502 aa17.56■□□□□ 0.4
CHTOP-202ENST00000368687 PCDHGB7Q9Y5F8 929 aa17.56■□□□□ 0.4
CHTOP-202ENST00000368687 ARGFXA6NJG6 315 aa17.55■□□□□ 0.4
CHTOP-202ENST00000368687 STX16-NPEPL1H3BU86 382 aa17.55■□□□□ 0.4
CHTOP-202ENST00000368687 STX16O14662 325 aa17.55■□□□□ 0.4
CHTOP-202ENST00000368687 UGDHO60701 494 aa17.55■□□□□ 0.4
CHTOP-202ENST00000368687 CLEC3AO75596 197 aa17.55■□□□□ 0.4
CHTOP-202ENST00000368687 VARSP26640 1264 aaKnown RBP17.55■□□□□ 0.4
CHTOP-202ENST00000368687 GCAP28676 217 aa17.55■□□□□ 0.4
CHTOP-202ENST00000368687 KLC1Q07866 573 aa17.55■□□□□ 0.4
CHTOP-202ENST00000368687 DCAF10Q5QP82 559 aa17.55■□□□□ 0.4
CHTOP-202ENST00000368687 TCTN3Q6NUS6 607 aa17.55■□□□□ 0.4
CHTOP-202ENST00000368687 PPP1R32Q7Z5V6 425 aa17.55■□□□□ 0.4
CHTOP-202ENST00000368687 TDRPQ86YL5 185 aa17.55■□□□□ 0.4
CHTOP-202ENST00000368687 HPS6Q86YV9 775 aa17.55■□□□□ 0.4
CHTOP-202ENST00000368687 ANKRD53Q8N9V6 530 aa17.55■□□□□ 0.4
CHTOP-202ENST00000368687 OR9A4Q8NGU2 314 aa17.55■□□□□ 0.4
CHTOP-202ENST00000368687 ZCCHC10Q8TBK6 192 aa17.55■□□□□ 0.4
CHTOP-202ENST00000368687 OR1F2PQ96R84 312 aa17.55■□□□□ 0.4
CHTOP-202ENST00000368687 SPNS1Q9H2V7 528 aa17.55■□□□□ 0.4
CHTOP-202ENST00000368687 SOX17Q9H6I2 414 aaPredicted RBP17.55■□□□□ 0.4
CHTOP-202ENST00000368687 CPSF2Q9P2I0 782 aaKnown RBP17.55■□□□□ 0.4
CHTOP-202ENST00000368687 XPR1Q9UBH6 696 aa17.55■□□□□ 0.4
CHTOP-202ENST00000368687 ADGRE2Q9UHX3 823 aa17.55■□□□□ 0.4
CHTOP-202ENST00000368687 C3orf18Q9UK00 162 aa17.55■□□□□ 0.4
CHTOP-202ENST00000368687 KLHL18O94889 574 aa17.54■□□□□ 0.4
CHTOP-202ENST00000368687 GSTA1P08263 222 aa17.54■□□□□ 0.4
CHTOP-202ENST00000368687 ATXN8OSP0DMR3 200 aa17.54■□□□□ 0.4
CHTOP-202ENST00000368687 IL1RNP18510 177 aa17.54■□□□□ 0.4
CHTOP-202ENST00000368687 GMPRP36959 345 aa17.54■□□□□ 0.4
CHTOP-202ENST00000368687 HNF4AP41235 474 aa17.54■□□□□ 0.4
CHTOP-202ENST00000368687 AP2B1P63010 937 aa17.54■□□□□ 0.4
CHTOP-202ENST00000368687 TGM3Q08188 693 aa17.54■□□□□ 0.4
CHTOP-202ENST00000368687 AIMP2Q13155 320 aaKnown RBP17.54■□□□□ 0.4
CHTOP-202ENST00000368687 CHIT1Q13231 466 aa17.54■□□□□ 0.4
CHTOP-202ENST00000368687 LACTB2Q53H82 288 aaPredicted RBP17.54■□□□□ 0.4
CHTOP-202ENST00000368687 FAM69BQ5VUD6 431 aa17.54■□□□□ 0.4
CHTOP-202ENST00000368687 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.54■□□□□ 0.4
CHTOP-202ENST00000368687 PLD6Q8N2A8 252 aaKnown RBP17.54■□□□□ 0.4
CHTOP-202ENST00000368687 CREB3L4Q8TEY5 395 aa17.54■□□□□ 0.4
CHTOP-202ENST00000368687 GAL3ST3Q96A11 431 aa17.54■□□□□ 0.4
CHTOP-202ENST00000368687 REPS1Q96D71 796 aa17.54■□□□□ 0.4
CHTOP-202ENST00000368687 ABHD17AQ96GS6 310 aa17.54■□□□□ 0.4
CHTOP-202ENST00000368687 RHBGQ9H310 441 aa17.54■□□□□ 0.4
CHTOP-202ENST00000368687 NAALAD2Q9Y3Q0 740 aa17.54■□□□□ 0.4
CHTOP-202ENST00000368687 HELZ2Q9BYK8 2649 aaKnown RBP17.54■□□□□ 0.4
CHTOP-202ENST00000368687 MED13Q9UHV7 2174 aa17.53■□□□□ 0.4
CHTOP-202ENST00000368687 IDSB3KWA1 339 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms