RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 CERS4Q9HA82 394 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 RBMX2Q9Y388 322 aaKnown RBP16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 CFAP20Q9Y6A4 193 aaKnown RBP16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 ANKRD12Q6UB98 2062 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 GBAP04062 536 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 LINGO3P0C6S8 592 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 ACSL1P33121 698 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 LMAN2Q12907 356 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 CBLBQ13191 982 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 GPM6BQ13491 265 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 OR4D1Q15615 310 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 TSTQ16762 297 aaKnown RBP16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 TCEAL5Q5H9L2 206 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 OR52B6Q8NGF0 335 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 TRIB2Q92519 343 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 GPER1Q99527 375 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 CCDC59Q9P031 241 aaKnown RBP16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 STOML2Q9UJZ1 356 aa16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 MRPS17Q9Y2R5 130 aaKnown RBP16.53■□□□□ 0.24
TRAPPC11-201ENST00000334690 ANXA2P2A6NMY6 339 aa16.52■□□□□ 0.24
TRAPPC11-201ENST00000334690 TLX2O43763 284 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC11-201ENST00000334690 AOC2O75106 756 aa16.52■□□□□ 0.24
TRAPPC11-201ENST00000334690 ANXA2P07355 339 aaKnown RBP16.52■□□□□ 0.24
TRAPPC11-201ENST00000334690 FGF4P08620 206 aa16.52■□□□□ 0.24
TRAPPC11-201ENST00000334690 ACVR2AP27037 513 aa16.52■□□□□ 0.24
TRAPPC11-201ENST00000334690 GATMP50440 423 aa16.52■□□□□ 0.24
TRAPPC11-201ENST00000334690 HLCSP50747 726 aa16.52■□□□□ 0.24
TRAPPC11-201ENST00000334690 CLCN7P51798 805 aa16.52■□□□□ 0.24
TRAPPC11-201ENST00000334690 CLDN8P56748 225 aa16.52■□□□□ 0.24
TRAPPC11-201ENST00000334690 FPGSQ05932 587 aa16.52■□□□□ 0.24
TRAPPC11-201ENST00000334690 ZNF776Q68DI1 518 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC11-201ENST00000334690 ZNF598Q86UK7 904 aaKnown RBP16.52■□□□□ 0.24
TRAPPC11-201ENST00000334690 TRAM1L1Q8N609 369 aa16.52■□□□□ 0.24
TRAPPC11-201ENST00000334690 UBR2Q8IWV8 1755 aa16.52■□□□□ 0.24
TRAPPC11-201ENST00000334690 MYO18AQ92614 2054 aaKnown RBP16.52■□□□□ 0.24
TRAPPC11-201ENST00000334690 EIF3FO00303 357 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC11-201ENST00000334690 C1GALT1C1LP0DN25 315 aa16.52■□□□□ 0.24
TRAPPC11-201ENST00000334690 ZNF182P17025 639 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC11-201ENST00000334690 RNF130Q86XS8 419 aa16.52■□□□□ 0.24
TRAPPC11-201ENST00000334690 SPATA9Q9BWV2 254 aa16.52■□□□□ 0.24
TRAPPC11-201ENST00000334690 CRYBG1Q9Y4K1 1723 aa16.52■□□□□ 0.24
TRAPPC11-201ENST00000334690 JUPP14923 745 aa16.52■□□□□ 0.23
TRAPPC11-201ENST00000334690 ZNF8P17098 575 aaPredicted RBP16.52■□□□□ 0.23
TRAPPC11-201ENST00000334690 GLDCP23378 1020 aa16.52■□□□□ 0.23
TRAPPC11-201ENST00000334690 RPL10P27635 214 aaKnown RBP16.52■□□□□ 0.23
TRAPPC11-201ENST00000334690 TIA1P31483 386 aaKnown RBP eCLIP16.52■□□□□ 0.23
TRAPPC11-201ENST00000334690 DNASE1L1P49184 302 aa16.52■□□□□ 0.23
TRAPPC11-201ENST00000334690 PRPF38BQ5VTL8 546 aaKnown RBP16.52■□□□□ 0.23
TRAPPC11-201ENST00000334690 SUSD1Q6UWL2 747 aa16.52■□□□□ 0.23
TRAPPC11-201ENST00000334690 GSDMCQ9BYG8 508 aa16.52■□□□□ 0.23
TRAPPC11-201ENST00000334690 SDR39U1Q9NRG7 319 aaPredicted RBP16.52■□□□□ 0.23
TRAPPC11-201ENST00000334690 C14orf105Q9NVL8 296 aa16.52■□□□□ 0.23
TRAPPC11-201ENST00000334690 MALT1Q9UDY8 824 aa16.52■□□□□ 0.23
TRAPPC11-201ENST00000334690 GPN3Q9UHW5 284 aaPredicted RBP16.52■□□□□ 0.23
TRAPPC11-201ENST00000334690 ACSL5Q9ULC5 683 aa16.52■□□□□ 0.23
TRAPPC11-201ENST00000334690 GABRQQ9UN88 632 aa16.52■□□□□ 0.23
TRAPPC11-201ENST00000334690 ZNF3P17036 446 aa16.52■□□□□ 0.23
TRAPPC11-201ENST00000334690 IL12BP29460 328 aa16.52■□□□□ 0.23
TRAPPC11-201ENST00000334690 ENTPD1P49961 510 aa16.52■□□□□ 0.23
TRAPPC11-201ENST00000334690 CDH11P55287 796 aa16.52■□□□□ 0.23
TRAPPC11-201ENST00000334690 HSF2Q03933 536 aa16.52■□□□□ 0.23
TRAPPC11-201ENST00000334690 LAPTM4AQ15012 233 aa16.52■□□□□ 0.23
TRAPPC11-201ENST00000334690 ABRAXAS2Q15018 415 aa16.52■□□□□ 0.23
TRAPPC11-201ENST00000334690 XKR4Q5GH76 650 aa16.52■□□□□ 0.23
TRAPPC11-201ENST00000334690 TMCO2Q7Z6W1 182 aaPredicted RBP16.52■□□□□ 0.23
TRAPPC11-201ENST00000334690 MARCH9Q86YJ5 346 aa16.52■□□□□ 0.23
TRAPPC11-201ENST00000334690 FUBP1Q96AE4 644 aaKnown RBP16.52■□□□□ 0.23
TRAPPC11-201ENST00000334690 SLC35C2Q9NQQ7 365 aa16.52■□□□□ 0.23
TRAPPC11-201ENST00000334690 TMLHEQ9NVH6 421 aa16.52■□□□□ 0.23
TRAPPC11-201ENST00000334690 TMEM45AQ9NWC5 275 aa16.52■□□□□ 0.23
TRAPPC11-201ENST00000334690 PTGDR2Q9Y5Y4 395 aa16.52■□□□□ 0.23
TRAPPC11-201ENST00000334690 IQCMA0A1B0GVH7 501 aa16.51■□□□□ 0.23
TRAPPC11-201ENST00000334690 LEFTY1O75610 366 aa16.51■□□□□ 0.23
TRAPPC11-201ENST00000334690 PDYNP01213 254 aa16.51■□□□□ 0.23
TRAPPC11-201ENST00000334690 BMP2P12643 396 aa16.51■□□□□ 0.23
TRAPPC11-201ENST00000334690 OR4D2P58180 307 aa16.51■□□□□ 0.23
TRAPPC11-201ENST00000334690 LASP1Q14847 261 aaKnown RBP16.51■□□□□ 0.23
TRAPPC11-201ENST00000334690 KANK2Q63ZY3 851 aa16.51■□□□□ 0.23
TRAPPC11-201ENST00000334690 SLC8B1Q6J4K2 584 aa16.51■□□□□ 0.23
TRAPPC11-201ENST00000334690 CCDC36Q8IYA8 594 aa16.51■□□□□ 0.23
TRAPPC11-201ENST00000334690 HSPBAP1Q96EW2 488 aa16.51■□□□□ 0.23
TRAPPC11-201ENST00000334690 BTBD1Q9H0C5 482 aa16.51■□□□□ 0.23
TRAPPC11-201ENST00000334690 MMP27Q9H306 513 aa16.51■□□□□ 0.23
TRAPPC11-201ENST00000334690 PCTPQ9UKL6 214 aa16.51■□□□□ 0.23
TRAPPC11-201ENST00000334690 PCDHGA10Q9Y5H3 936 aa16.51■□□□□ 0.23
TRAPPC11-201ENST00000334690 A0A0J9YVX5 310 aa16.51■□□□□ 0.23
TRAPPC11-201ENST00000334690 A0A1W2PQ72 361 aa16.51■□□□□ 0.23
TRAPPC11-201ENST00000334690 TSPAN6O43657 245 aa16.51■□□□□ 0.23
TRAPPC11-201ENST00000334690 GSTT2BP0CG30 244 aa16.51■□□□□ 0.23
TRAPPC11-201ENST00000334690 SLC2A2P11168 524 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC11-201ENST00000334690 PPP3R1P63098 170 aa16.51■□□□□ 0.23
TRAPPC11-201ENST00000334690 OLFML2AQ68BL7 652 aa16.51■□□□□ 0.23
TRAPPC11-201ENST00000334690 UBE2J2Q8N2K1 259 aa16.51■□□□□ 0.23
TRAPPC11-201ENST00000334690 MGME1Q9BQP7 344 aa16.51■□□□□ 0.23
TRAPPC11-201ENST00000334690 DOHHQ9BU89 302 aa16.51■□□□□ 0.23
TRAPPC11-201ENST00000334690 FBXL12Q9NXK8 326 aa16.51■□□□□ 0.23
TRAPPC11-201ENST00000334690 PRAMEF33A0A0G2JMD5 474 aa16.51■□□□□ 0.23
TRAPPC11-201ENST00000334690 ELOA3DA6NLF2 546 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC11-201ENST00000334690 PRAMEF10O60809 474 aa16.51■□□□□ 0.23
TRAPPC11-201ENST00000334690 ARL6IP5O75915 188 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms