RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 CAPN14A8MX76 684 aa16.31■□□□□ 0.2
TSPAN3-201ENST00000267970 BTBD19C9JJ37 291 aa16.31■□□□□ 0.2
TSPAN3-201ENST00000267970 CREG1O75629 220 aa16.31■□□□□ 0.2
TSPAN3-201ENST00000267970 SLC24A5Q71RS6 500 aa16.31■□□□□ 0.2
TSPAN3-201ENST00000267970 THOC6Q86W42 341 aaKnown RBP16.31■□□□□ 0.2
TSPAN3-201ENST00000267970 PHOSPHO1Q8TCT1 267 aa16.31■□□□□ 0.2
TSPAN3-201ENST00000267970 MAGEH1Q9H213 219 aa16.31■□□□□ 0.2
TSPAN3-201ENST00000267970 TP63Q9H3D4 680 aaPredicted RBP16.31■□□□□ 0.2
TSPAN3-201ENST00000267970 WDR37Q9Y2I8 494 aa16.31■□□□□ 0.2
TSPAN3-201ENST00000267970 TLX3O43711 291 aaPredicted RBP16.31■□□□□ 0.2
TSPAN3-201ENST00000267970 MATN1P21941 496 aa16.31■□□□□ 0.2
TSPAN3-201ENST00000267970 PLGLB1Q02325 96 aa16.31■□□□□ 0.2
TSPAN3-201ENST00000267970 UBXN2BQ14CS0 331 aa16.31■□□□□ 0.2
TSPAN3-201ENST00000267970 USP50Q70EL3 339 aaPredicted RBP16.31■□□□□ 0.2
TSPAN3-201ENST00000267970 RASGRP3Q8IV61 690 aa16.31■□□□□ 0.2
TSPAN3-201ENST00000267970 PNLDC1Q8NA58 520 aaKnown RBP16.31■□□□□ 0.2
TSPAN3-201ENST00000267970 TMEM185BQ9H7F4 350 aa16.31■□□□□ 0.2
TSPAN3-201ENST00000267970 BRF2Q9HAW0 419 aa16.31■□□□□ 0.2
TSPAN3-201ENST00000267970 FZD3Q9NPG1 666 aa16.31■□□□□ 0.2
TSPAN3-201ENST00000267970 MLIPQ5VWP3 458 aa16.31■□□□□ 0.2
TSPAN3-201ENST00000267970 CCDC28AQ8IWP9 274 aa16.31■□□□□ 0.2
TSPAN3-201ENST00000267970 NDC1Q9BTX1 674 aa16.31■□□□□ 0.2
TSPAN3-201ENST00000267970 PIGVQ9NUD9 493 aa16.31■□□□□ 0.2
TSPAN3-201ENST00000267970 H0YJX3 145 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 SNAP29O95721 258 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 MECP2P51608 486 aaKnown RBP16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 CDH11P55287 796 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 GPAT4Q86UL3 456 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 PLD6Q8N2A8 252 aaKnown RBP16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 ZNF565Q8N9K5 539 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 HNRNPABQ99729 332 aaKnown RBP16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 C14orf166Q9Y224 244 aaKnown RBP16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 NPIPA5E9PKD4 350 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 STMND1H3BQB6 276 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 NNATQ16517 81 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 DUOXA1Q1HG43 343 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 TIGD5Q53EQ6 642 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 FAM180BQ6P0A1 224 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 Q6ZVU0 165 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 KRTCAP2Q8N6L1 136 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 OR51G2Q8NGK0 314 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 TTYH3Q9C0H2 523 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 NPIPA1Q9UND3 350 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 CFL2Q9Y281 166 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 UBXN7O94888 489 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 KAT7O95251 611 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 TACSTD2P09758 323 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 NCEH1Q6PIU2 408 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 IGDCC3Q8IVU1 814 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 MFSD8Q8NHS3 518 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 SSX3Q99909 188 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 KCNK6Q9Y257 313 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 POFUT2Q9Y2G5 429 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 ZNF860A6NHJ4 632 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 NFATC1O95644 943 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 UNGP13051 313 aaPredicted RBP16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 ANXA8P13928 327 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 ZNF227Q86WZ6 799 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 CD99L2Q8TCZ2 262 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 EIF5A2Q9GZV4 153 aaKnown RBP16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 TFB2MQ9H5Q4 396 aaKnown RBP16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 KLRF1Q9NZS2 232 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 HCN2Q9UL51 889 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 DNMT3AQ9Y6K1 912 aaPredicted RBP16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 KIF20BQ96Q89 1820 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 TRIM64BA6NI03 449 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 TYRP1P17643 537 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 OGNP20774 298 aaKnown RBP16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 PREPP48147 710 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 SMSP52788 366 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 ALG10Q5BKT4 473 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 PRAMEF14Q5SWL7 426 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 PRAMEF13Q5VWM6 474 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 TMEM17Q86X19 198 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 GEMIN6Q8WXD5 167 aaKnown RBP16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 TMEM80Q96HE8 168 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 RPF2Q9H7B2 306 aaKnown RBP16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 MAN2C1Q9NTJ4 1040 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 RABL2AQ9UBK7 228 aaPredicted RBP16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 ATRNL1Q5VV63 1379 aa16.3■□□□□ 0.2
TSPAN3-201ENST00000267970 HSPA12AO43301 675 aa16.29■□□□□ 0.2
TSPAN3-201ENST00000267970 CLCN2P51788 898 aa16.29■□□□□ 0.2
TSPAN3-201ENST00000267970 MBOAT1Q6ZNC8 495 aa16.29■□□□□ 0.2
TSPAN3-201ENST00000267970 ELMOD2Q8IZ81 293 aa16.29■□□□□ 0.2
TSPAN3-201ENST00000267970 GJD3Q8N144 294 aa16.29■□□□□ 0.2
TSPAN3-201ENST00000267970 MFSD2AQ8NA29 543 aa16.29■□□□□ 0.2
TSPAN3-201ENST00000267970 THAP3Q8WTV1 239 aaPredicted RBP16.29■□□□□ 0.2
TSPAN3-201ENST00000267970 DPCDQ9BVM2 203 aaPredicted RBP16.29■□□□□ 0.2
TSPAN3-201ENST00000267970 SPATA7Q9P0W8 599 aa16.29■□□□□ 0.2
TSPAN3-201ENST00000267970 GJD2Q9UKL4 321 aa16.29■□□□□ 0.2
TSPAN3-201ENST00000267970 DIP2BQ9P265 1576 aa16.29■□□□□ 0.2
TSPAN3-201ENST00000267970 SLC26A5P58743 744 aa16.29■□□□□ 0.2
TSPAN3-201ENST00000267970 CDK6Q00534 326 aa16.29■□□□□ 0.2
TSPAN3-201ENST00000267970 NOXRED1Q6NXP6 359 aa16.29■□□□□ 0.2
TSPAN3-201ENST00000267970 NCCRP1Q6ZVX7 275 aaPredicted RBP16.29■□□□□ 0.2
TSPAN3-201ENST00000267970 SAMD12Q8N8I0 201 aa16.29■□□□□ 0.2
TSPAN3-201ENST00000267970 SHKBP1Q8TBC3 707 aa16.29■□□□□ 0.2
TSPAN3-201ENST00000267970 ISOC1Q96CN7 298 aa16.29■□□□□ 0.2
TSPAN3-201ENST00000267970 TBC1D14Q9P2M4 693 aa16.29■□□□□ 0.2
TSPAN3-201ENST00000267970 MMP20O60882 483 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms