RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 T-ENOLP0DO92 83 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 IDO1P14902 403 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 PVRP15151 417 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 EZRP15311 586 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 PTX3P26022 381 aaPredicted RBP14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 PIK3R1P27986 724 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 CD1CP29017 333 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 PRDX6P30041 224 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 GPLD1P80108 840 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 CFHR1Q03591 330 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 BNIP1Q12981 228 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 HERC3Q15034 1050 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 SPRED3Q2MJR0 410 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 ADPRMQ3LIE5 342 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 PDCD4Q53EL6 469 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 LACTB2Q53H82 288 aaPredicted RBP14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 DEPDC1Q5TB30 811 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 IL23RQ5VWK5 629 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 RNF44Q7L0R7 432 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 VN1R4Q7Z5H5 301 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 SPRED1Q7Z699 444 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 YTHDF3Q7Z739 585 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 PARP9Q8IXQ6 854 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 METTL4Q8N3J2 472 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 OR2A5Q96R48 311 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 CD180Q99467 661 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 C1orf50Q9BV19 199 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 AICDAQ9GZX7 198 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 OR51B5Q9H339 312 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 SDR39U1Q9NRG7 319 aaPredicted RBP14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 C1GALT1Q9NS00 363 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 NMRK1Q9NWW6 199 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 NOP53Q9NZM5 478 aaKnown RBP14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 SEMA5BQ9P283 1151 aa14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 POLR3HQ9Y535 204 aaPredicted RBP14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 MN1Q10571 1320 aaPredicted RBP14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 NUP214P35658 2090 aaPredicted RBP14.1□□□□□ -0.15
SHKBP1-211ENST00000595945 ANKRD28O15084 1053 aa14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 CAPN5O15484 640 aaPredicted RBP14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 TGFB1P01137 390 aa14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 CKMT1AP12532 417 aa14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 CD1EP15812 388 aa14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 ST6GAL1P15907 406 aa14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 ALDH4A1P30038 563 aa14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 ACADVLP49748 655 aa14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 GFERP55789 205 aa14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 CYP4F2P78329 520 aa14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 RAE1P78406 368 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 HYAL2Q12891 473 aa14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 SPIN4Q56A73 249 aa14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 PERM1Q5SV97 790 aa14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 KHDRBS2Q5VWX1 349 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 NKAIN2Q5VXU1 208 aa14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 IRGCQ6NXR0 463 aa14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 GUSBP11Q6P575 273 aa14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 GALNT18Q6P9A2 607 aa14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 CYP20A1Q6UW02 462 aa14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 CCDC121Q6ZUS5 278 aa14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 C19orf47Q8N9M1 422 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 NAT6Q93015 286 aa14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 TM4SF19Q96DZ7 209 aa14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 NSL1Q96IY1 281 aa14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 MAP3K3Q99759 626 aa14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 CHRNA10Q9GZZ6 450 aa14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 ACTL8Q9H568 366 aa14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 TMEM45AQ9NWC5 275 aa14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 ZIM2Q9NZV7 527 aa14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 EIF3LQ9Y262 564 aaKnown RBP14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 BTBD3Q9Y2F9 522 aa14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 DLGAP4Q9Y2H0 992 aa14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 COL27A1Q8IZC6 1860 aaPredicted RBP14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 FRYLO94915 3013 aa14.09□□□□□ -0.15
SHKBP1-211ENST00000595945 ZNF292O60281 2723 aa14.08□□□□□ -0.15
SHKBP1-211ENST00000595945 TLCD2A6NGC4 264 aa14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 ERICH4A6NGS2 130 aa14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 PSMD12O00232 456 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 CDX4O14627 284 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 DUX1O43812 170 aa14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 KIF1CO43896 1103 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 PRAMEF10O60809 474 aa14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 SH3BGRLO75368 114 aa14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 CBX6O95503 412 aa14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 G6PDP11413 515 aa14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 PRPS2P11908 318 aa14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 BCKDHAP12694 445 aa14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 PCSK2P16519 638 aa14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 CDH3P22223 829 aa14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 MAPK1P28482 360 aa14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 CSF2RBP32927 897 aa14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 ZFP36L2P47974 494 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 ATXN3P54252 364 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 STX1BP61266 288 aa14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 CYP4F3Q08477 520 aa14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 SUZ12Q15022 739 aaKnown RBP14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 NOXRED1Q6NXP6 359 aa14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 ZNF771Q7L3S4 317 aaPredicted RBP14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 UBE3DQ7Z6J8 389 aa14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 FUNDC1Q8IVP5 155 aa14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 CARFQ8N187 725 aa14.08□□□□□ -0.16
SHKBP1-211ENST00000595945 MIER2Q8N344 545 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 202.4 ms