RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 CCT3P49368 545 aaKnown RBP16.76■□□□□ 0.27
PTPN21-208ENST00000556564 IRF4Q15306 451 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 TTLL10Q6ZVT0 673 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 CCDC116Q8IYX3 515 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 OR51V1Q9H2C8 321 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 CA5BQ9Y2D0 317 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 MED31Q9Y3C7 131 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 HCN1O60741 890 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 PCSK2P16519 638 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 MAOBP27338 520 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 SLAMF1Q13291 335 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 NR0B2Q15466 257 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 LIPJQ5W064 366 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 FRMD7Q6ZUT3 714 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 TRIM73Q86UV7 250 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 SNX33Q8WV41 574 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 NUAK2Q9H093 628 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 HSFX1Q9UBD0 423 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 RARRES3Q9UL19 164 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 HOXB6P17509 224 aaKnown RBP16.76■□□□□ 0.27
PTPN21-208ENST00000556564 HOXD9P28356 352 aaPredicted RBP16.76■□□□□ 0.27
PTPN21-208ENST00000556564 NDUFAF6Q330K2 333 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 NATD1Q8N6N6 113 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 OR4K14Q8NGD5 310 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 PRR11Q96HE9 360 aaPredicted RBP16.76■□□□□ 0.27
PTPN21-208ENST00000556564 MPP4Q96JB8 637 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 PLEKHG4BQ96PX9 1271 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 GFM1Q96RP9 751 aaKnown RBP16.76■□□□□ 0.27
PTPN21-208ENST00000556564 ZNF726A6NNF4 738 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 TDGQ13569 410 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 NADSYN1Q6IA69 706 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 CXorf57Q6NSI4 855 aaKnown RBP16.76■□□□□ 0.27
PTPN21-208ENST00000556564 OR2AJ1Q8NGZ0 328 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 DNAJB8Q8NHS0 232 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 SLC39A3Q9BRY0 314 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 STMN3Q9NZ72 180 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 NOBOXO60393 691 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 HLA-FP30511 346 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 OTX2P32243 289 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 ZCCHC12Q6PEW1 402 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 PAQR9Q6ZVX9 377 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 LRRC58Q96CX6 371 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 ACTL8Q9H568 366 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 THUMPD1Q9NXG2 353 aaKnown RBP16.76■□□□□ 0.27
PTPN21-208ENST00000556564 GALNT8Q9NY28 637 aa16.76■□□□□ 0.27
PTPN21-208ENST00000556564 WWP2O00308 870 aa16.75■□□□□ 0.27
PTPN21-208ENST00000556564 ZNF823P16415 610 aa16.75■□□□□ 0.27
PTPN21-208ENST00000556564 NUP62P37198 522 aaPredicted RBP16.75■□□□□ 0.27
PTPN21-208ENST00000556564 KRT77Q7Z794 578 aa16.75■□□□□ 0.27
PTPN21-208ENST00000556564 OR56A1Q8NGH5 318 aa16.75■□□□□ 0.27
PTPN21-208ENST00000556564 ZIM2Q9NZV7 527 aa16.75■□□□□ 0.27
PTPN21-208ENST00000556564 USP3Q9Y6I4 520 aa16.75■□□□□ 0.27
PTPN21-208ENST00000556564 LAMA4Q16363 1823 aa16.75■□□□□ 0.27
PTPN21-208ENST00000556564 H3BNC9 293 aa16.75■□□□□ 0.27
PTPN21-208ENST00000556564 MED26O95402 600 aa16.75■□□□□ 0.27
PTPN21-208ENST00000556564 RPS15AP62244 130 aaKnown RBP16.75■□□□□ 0.27
PTPN21-208ENST00000556564 FRRS1Q6ZNA5 592 aa16.75■□□□□ 0.27
PTPN21-208ENST00000556564 CXXC5Q7LFL8 322 aaKnown RBP16.75■□□□□ 0.27
PTPN21-208ENST00000556564 OR4K1Q8NGD4 311 aa16.75■□□□□ 0.27
PTPN21-208ENST00000556564 SH3YL1Q96HL8 342 aaPredicted RBP16.75■□□□□ 0.27
PTPN21-208ENST00000556564 ZNF41P51814 821 aaPredicted RBP16.75■□□□□ 0.27
PTPN21-208ENST00000556564 C10orf82Q8WW14 230 aa16.75■□□□□ 0.27
PTPN21-208ENST00000556564 DBTP11182 482 aaKnown RBP16.75■□□□□ 0.27
PTPN21-208ENST00000556564 TIMP2P16035 220 aa16.75■□□□□ 0.27
PTPN21-208ENST00000556564 ZNF763Q0D2J5 394 aa16.75■□□□□ 0.27
PTPN21-208ENST00000556564 LASP1Q14847 261 aaKnown RBP16.75■□□□□ 0.27
PTPN21-208ENST00000556564 PEX13Q92968 403 aa16.75■□□□□ 0.27
PTPN21-208ENST00000556564 PKP4Q99569 1192 aa16.75■□□□□ 0.27
PTPN21-208ENST00000556564 CDK5RAP2Q96SN8 1893 aa16.75■□□□□ 0.27
PTPN21-208ENST00000556564 ARHGEF33A8MVX0 844 aa16.75■□□□□ 0.27
PTPN21-208ENST00000556564 DNAJB1P25685 340 aa16.75■□□□□ 0.27
PTPN21-208ENST00000556564 SGSHP51688 502 aa16.75■□□□□ 0.27
PTPN21-208ENST00000556564 OLR1P78380 273 aa16.75■□□□□ 0.27
PTPN21-208ENST00000556564 SLC18A2Q05940 514 aa16.75■□□□□ 0.27
PTPN21-208ENST00000556564 ATCAYQ86WG3 371 aa16.75■□□□□ 0.27
PTPN21-208ENST00000556564 GPR65Q8IYL9 337 aa16.75■□□□□ 0.27
PTPN21-208ENST00000556564 ZNF483Q8TF39 744 aaPredicted RBP16.75■□□□□ 0.27
PTPN21-208ENST00000556564 EZH1Q92800 747 aaPredicted RBP16.75■□□□□ 0.27
PTPN21-208ENST00000556564 F2RL3Q96RI0 385 aa16.75■□□□□ 0.27
PTPN21-208ENST00000556564 PCDHAC1Q9H158 963 aa16.75■□□□□ 0.27
PTPN21-208ENST00000556564 IRGMA1A4Y4 181 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 PTNP21246 168 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 CD9P21926 228 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 KCNC1P48547 511 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 ADGRE1Q14246 886 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 ZSWIM7Q19AV6 140 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 LHX8Q68G74 356 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 GAREM2Q75VX8 874 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 GATSQ8NAP1 163 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 MDGA1Q8NFP4 955 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 OR52E4Q8NGH9 312 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 MOCOSQ96EN8 888 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 KCNC2Q96PR1 638 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 MTTPP55157 894 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 TMPRSS11AQ6ZMR5 421 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 DPPA4Q7L190 304 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 RNF130Q86XS8 419 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 LRRC3Q9BY71 257 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 ACVR2AP27037 513 aa16.74■□□□□ 0.27
PTPN21-208ENST00000556564 OR4D2P58180 307 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms