RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 PTRH1Q86Y79 214 aaKnown RBP6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 PLXDC1Q8IUK5 500 aa6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 ZNF619Q8N2I2 560 aa6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 ZBTB2Q8N680 514 aa6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 BVESQ8NE79 360 aa6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 ACVR1CQ8NER5 493 aa6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 OR4E2Q8NGC2 313 aa6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 OR5AR1Q8NGP9 310 aa6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 OR5K2Q8NHB8 316 aa6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 HDAC2Q92769 488 aaKnown RBP6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 KCNJ9Q92806 393 aa6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 INPP5DQ92835 1189 aa6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 FAM136AQ96C01 138 aa6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 ATP6V1G3Q96LB4 118 aa6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 HS6ST2Q96MM7 605 aa6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 CMTM3Q96MX0 182 aa6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 NSUN5Q96P11 429 aaKnown RBP6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 SLC30A3Q99726 388 aa6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 AIFM2Q9BRQ8 373 aa6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 GPATCH1Q9BRR8 931 aaKnown RBP6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 MCMBPQ9BTE3 642 aa6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 NRSN2Q9GZP1 204 aa6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 KLHL25Q9H0H3 589 aa6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 SEMA6CQ9H3T2 930 aa6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 SYNDIG1Q9H7V2 258 aa6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 C8orf4Q9NR00 106 aa6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 NSMCE4AQ9NXX6 385 aa6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 TAS2R13Q9NYV9 303 aa6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 GPRC5BQ9NZH0 403 aa6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 SLC17A6Q9P2U8 582 aa6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 EPHA6Q9UF33 1036 aa6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 CORO1CQ9ULV4 474 aaPredicted RBP6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 POLHQ9Y253 713 aa6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 ASF1AQ9Y294 204 aa6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 VWA7Q9Y334 891 aa6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 PSAT1Q9Y617 370 aa6.06□□□□□ -1.44
ATPAF1-209ENST00000529214 A0A1W2PNU3 283 aaPredicted RBP6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 BIRC5O15392 142 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 CAPN5O15484 640 aaPredicted RBP6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 RIPK2O43353 540 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 SPAG6O75602 509 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 PIAS1O75925 651 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 TSPAN9O75954 239 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 C1orf105O95561 183 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 CBSLP0DN79 551 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 CSF2RBP32927 897 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 CBSP35520 551 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 SSTP61278 116 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 TUBB4BP68371 445 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 ILF2Q12905 390 aaKnown RBP6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 EIF3IQ13347 325 aaKnown RBP6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 TRA2AQ13595 282 aaKnown RBP eCLIP6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 PLCL1Q15111 1095 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 TMED2Q15363 201 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 KLHL38Q2WGJ6 581 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 TTLL9Q3SXZ7 439 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 RBM20Q5T481 1227 aaKnown RBP6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 HECTD2Q5U5R9 776 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 ABHD17CQ6PCB6 329 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 KLHL35Q6PF15 583 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 SHQ1Q6PI26 577 aaKnown RBP6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 B3GNT6Q6ZMB0 384 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 OVCH2Q7RTZ1 564 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 STK32CQ86UX6 486 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 ZC3HC1Q86WB0 502 aaKnown RBP6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 AMIGO1Q86WK6 493 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 CYP4X1Q8N118 509 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 EIF1ADQ8N9N8 165 aaKnown RBP6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 SIDT2Q8NBJ9 832 aaKnown RBP6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 OR52E1Q8NGJ3 308 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 CFAP61Q8NHU2 1237 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 RFWD2Q8NHY2 731 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 CD200R1Q8TD46 325 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 CHTF18Q8WVB6 975 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 LCN9Q8WX39 176 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 RSC1A1Q92681 617 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 GATA6Q92908 595 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 PLPPR2Q96GM1 343 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 ZDHHC12Q96GR4 267 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 ATXN7L3BQ96GX2 97 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 LIN37Q96GY3 246 aaPredicted RBP6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 PRR11Q96HE9 360 aaPredicted RBP6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 UBXN10Q96LJ8 280 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 FMO2Q99518 471 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 NDNQ99608 321 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 GPR21Q99679 349 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 COQ7Q99807 217 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 GAL3ST1Q99999 423 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 FUT8Q9BYC5 575 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 STRADBQ9C0K7 418 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 TWSG1Q9GZX9 223 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 TRIT1Q9H3H1 467 aaKnown RBP6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 HRASLS2Q9NWW9 162 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 TMEM9Q9P0T7 183 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 MBD2Q9UBB5 411 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 NFU1Q9UMS0 254 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 PTPRBP23467 1997 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 KNTC1P50748 2209 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 WDFY3Q8IZQ1 3526 aa6.05□□□□□ -1.44
ATPAF1-209ENST00000529214 CACNA1AO00555 2505 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms