RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	TBC1D3D	A0A087WVF3	549 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	TBC1D3I	A0A087WXS9	549 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	TBC1D3E	A0A087X179	549 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	TBC1D3K	A0A087X1G2	549 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006		A0A1W2PQU0	124 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	TBC1D3F	A6NER0	549 aa	Predicted RBP	10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	TMEM221	A6NGB7	291 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	CCDC160	A6NGH7	325 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	TBC1D3L	B9A6J9	549 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006		M0R296	226 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	CLIC1	O00299	241 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	SOCS2	O14508	198 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	KCNJ13	O60928	360 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	CREG1	O75629	220 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	CLPTM1	O96005	669 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	SERPINA1	P01009	418 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	MT-ND1	P03886	318 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	TBC1D3H	P0C7X1	549 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	ZNF26	P17031	533 aa	Predicted RBP	10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	CKMT2	P17540	419 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	ENG	P17813	658 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	IDS	P22304	550 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	PTX3	P26022	381 aa	Predicted RBP	10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	ACADL	P28330	430 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	GRK3	P35626	688 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	CHI3L1	P36222	383 aa	Predicted RBP	10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	RPS9	P46781	194 aa	Known RBP	10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	GALK1	P51570	392 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	ARHGDIA	P52565	204 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	ZXDA	P98168	799 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	TAP2	Q03519	686 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	EPS8	Q12929	822 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	MTAP	Q13126	283 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	FXN	Q16595	210 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	ZNF658B	Q4V348	819 aa	Predicted RBP	10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	CATSPERE	Q5SY80	951 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	TBC1D3G	Q6DHY5	549 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	TBC1D3C	Q6IPX1	549 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	ZCCHC8	Q6NZY4	707 aa	Known RBP	10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	TTC33	Q6PID6	262 aa	Predicted RBP	10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	KIAA1324	Q6UXG2	1013 aa	Known RBP	10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	TMIGD1	Q6UXZ0	262 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	IKBIP	Q70UQ0	350 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	COMMD6	Q7Z4G1	85 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	BMP8A	Q7Z5Y6	402 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	SERPINA11	Q86U17	422 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	ZDHHC13	Q8IUH4	622 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	ZNF547	Q8IVP9	402 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	LAS2	Q8IYD9	372 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	TBC1D3	Q8IZP1	549 aa	Predicted RBP	10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	DHRSX	Q8N5I4	330 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	PAPD5	Q8NDF8	572 aa	Known RBP	10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	ZNF555	Q8NEP9	628 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	OR8J2	Q8NGG1	315 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	OR5K2	Q8NHB8	316 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	FGF14	Q92915	247 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	ZNF583	Q96ND8	569 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	IL17F	Q96PD4	163 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	TSC22D3	Q99576	134 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	ADI1	Q9BV57	179 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	TEX101	Q9BY14	249 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	BHLHE41	Q9C0J9	482 aa	Predicted RBP	10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	YIPF3	Q9GZM5	350 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	REEP4	Q9H6H4	257 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	IMP3	Q9NV31	184 aa	Known RBP	10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	GEMIN8	Q9NWZ8	242 aa	Known RBP	10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	SLC25A37	Q9NYZ2	338 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	DNAJB9	Q9UBS3	223 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	TAC3	Q9UHF0	121 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	BTNL2	Q9UIR0	455 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	MYRF	Q9Y2G1	1151 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	GPSM3	Q9Y4H4	160 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	OR1A2	Q9Y585	309 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	HEBP2	Q9Y5Z4	205 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	MDC1	Q14676	2089 aa	Known RBP	10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	LRP4	O75096	1905 aa		10.36	□□□□□ -0.75
SPIDR-222	ENST00000524006	TRBV5-3	A0A0A0MS03	114 aa		10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	EI24	O14681	340 aa		10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	PLRG1	O43660	514 aa	Known RBP	10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	PRAMEF4	O60810	478 aa		10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	HPR	P00739	348 aa		10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	CST1	P01037	141 aa		10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	CAPNS1	P04632	268 aa		10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	ABCB1	P08183	1280 aa	Predicted RBP	10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	CAPG	P40121	348 aa		10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	RXRG	P48443	463 aa		10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	MEF2A	Q02078	507 aa	Predicted RBP	10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	C2orf80	Q0P641	193 aa		10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	BIRC2	Q13490	618 aa		10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	ENPP2	Q13822	863 aa		10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	AGER	Q15109	404 aa		10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	UGT8	Q16880	541 aa		10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	ZXDC	Q2QGD7	858 aa	Predicted RBP	10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	OTUD3	Q5T2D3	398 aa	Predicted RBP	10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	PRAMEF9	Q5VWM5	478 aa		10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	OR52E8	Q6IFG1	317 aa		10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	ANKRD26P1	Q6NSI1	321 aa		10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	SPRED1	Q7Z699	444 aa		10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	HORMAD1	Q86X24	394 aa		10.35	□□□□□ -0.75
SPIDR-222	ENST00000524006	CHERP	Q8IWX8	916 aa	Known RBP	10.35	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms