RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 SYNPO2LQ9H987 977 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 NHEJ1Q9H9Q4 299 aaPredicted RBP11.79□□□□□ -0.52
DDX41-215ENST00000512431 ANKHQ9HCJ1 492 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 FAM114A2Q9NRY5 505 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 RASSF1Q9NS23 344 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 ABCF3Q9NUQ8 709 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 SLC2A6Q9UGQ3 507 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 DUSP10Q9Y6W6 482 aa11.79□□□□□ -0.52
DDX41-215ENST00000512431 MAGEB17A8MXT2 336 aa11.78□□□□□ -0.52
DDX41-215ENST00000512431 HAT1O14929 419 aa11.78□□□□□ -0.52
DDX41-215ENST00000512431 PJA2O43164 708 aa11.78□□□□□ -0.52
DDX41-215ENST00000512431 KIF5CO60282 957 aa11.78□□□□□ -0.52
DDX41-215ENST00000512431 NDUFS3O75489 264 aa11.78□□□□□ -0.52
DDX41-215ENST00000512431 PTMAP06454 111 aaKnown RBP11.78□□□□□ -0.52
DDX41-215ENST00000512431 TPM1P09493 284 aa11.78□□□□□ -0.52
DDX41-215ENST00000512431 INHBBP09529 407 aa11.78□□□□□ -0.52
DDX41-215ENST00000512431 ERGP11308 486 aa11.78□□□□□ -0.52
DDX41-215ENST00000512431 ADRA1DP25100 572 aa11.78□□□□□ -0.52
DDX41-215ENST00000512431 TRHRP34981 398 aaPredicted RBP11.78□□□□□ -0.52
DDX41-215ENST00000512431 HADHBP55084 474 aaKnown RBP11.78□□□□□ -0.52
DDX41-215ENST00000512431 TRIM14Q14142 442 aa11.78□□□□□ -0.52
DDX41-215ENST00000512431 SEMA3AQ14563 771 aa11.78□□□□□ -0.52
DDX41-215ENST00000512431 THEMIS2Q5TEJ8 643 aa11.78□□□□□ -0.52
DDX41-215ENST00000512431 FBXW10Q5XX13 1052 aa11.78□□□□□ -0.52
DDX41-215ENST00000512431 TMEM198Q66K66 360 aa11.78□□□□□ -0.52
DDX41-215ENST00000512431 PPP1R21Q6ZMI0 780 aa11.78□□□□□ -0.52
DDX41-215ENST00000512431 ZNF534Q76KX8 674 aa11.78□□□□□ -0.52
DDX41-215ENST00000512431 LDB1Q86U70 411 aaPredicted RBP11.78□□□□□ -0.52
DDX41-215ENST00000512431 LRRC6Q86X45 466 aa11.78□□□□□ -0.52
DDX41-215ENST00000512431 FAM71DQ8N9W8 422 aa11.78□□□□□ -0.52
DDX41-215ENST00000512431 LRRN4CLQ8ND94 238 aa11.78□□□□□ -0.52
DDX41-215ENST00000512431 ELP5Q8TE02 316 aa11.78□□□□□ -0.52
DDX41-215ENST00000512431 NANOS1Q8WY41 292 aaKnown RBP11.78□□□□□ -0.52
DDX41-215ENST00000512431 KRT35Q92764 455 aa11.78□□□□□ -0.52
DDX41-215ENST00000512431 DNAJC7Q99615 494 aa11.78□□□□□ -0.52
DDX41-215ENST00000512431 CHP1Q99653 195 aa11.78□□□□□ -0.52
DDX41-215ENST00000512431 DEFB127Q9H1M4 99 aa11.78□□□□□ -0.52
DDX41-215ENST00000512431 CATSPERZQ9NTU4 200 aa11.78□□□□□ -0.52
DDX41-215ENST00000512431 IFNKQ9P0W0 207 aa11.78□□□□□ -0.52
DDX41-215ENST00000512431 TSR3Q9UJK0 312 aaKnown RBP11.78□□□□□ -0.52
DDX41-215ENST00000512431 RIMKLBQ9ULI2 386 aa11.78□□□□□ -0.52
DDX41-215ENST00000512431 MAP1AP78559 2803 aaPredicted RBP11.78□□□□□ -0.52
DDX41-215ENST00000512431 ZNF469Q96JG9 3925 aaPredicted RBP11.78□□□□□ -0.52
DDX41-215ENST00000512431 SCN2AQ99250 2005 aa11.77□□□□□ -0.52
DDX41-215ENST00000512431 FIGNL2A6NMB9 653 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 NPIPA2E9PIF3 369 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 NPIPA3F8WFD2 350 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 GOLGA6L19H0YKK7 550 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 SGK494L7N484 410 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 CD3EAPO15446 510 aaKnown RBP11.77□□□□□ -0.53
DDX41-215ENST00000512431 CDC123O75794 336 aaPredicted RBP11.77□□□□□ -0.53
DDX41-215ENST00000512431 MATN4O95460 622 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 CATP04040 527 aaKnown RBP11.77□□□□□ -0.53
DDX41-215ENST00000512431 RAF1P04049 648 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 IL1RNP18510 177 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 ACVR2AP27037 513 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 PNLIPRP1P54315 467 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 DLX5P56178 289 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 MLF1P58340 268 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 MPP1Q00013 466 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 RHAGQ02094 409 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 KEAP1Q14145 624 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 GXYLT1Q4G148 440 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 PRSS41Q7RTY9 318 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 ZNF227Q86WZ6 799 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 CDC20BQ86Y33 519 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 PLD3Q8IV08 490 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 CYP4X1Q8N118 509 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 KIF2BQ8N4N8 673 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 TMEM156Q8N614 296 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 ZFP62Q8NB50 900 aaPredicted RBP11.77□□□□□ -0.53
DDX41-215ENST00000512431 CAMKVQ8NCB2 501 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 OR52N2Q8NGI0 321 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 SPATA3Q8NHX4 192 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 CREB3L4Q8TEY5 395 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 OR1F2PQ96R84 312 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 PANX2Q96RD6 677 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 MDFIQ99750 246 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 SARGQ9BW04 601 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 DEFB126Q9BYW3 111 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 PLSCR2Q9NRY7 297 aa11.77□□□□□ -0.53
DDX41-215ENST00000512431 R3HDM2Q9Y2K5 976 aaKnown RBP11.77□□□□□ -0.53
DDX41-215ENST00000512431 GOLGA6L9A6NEM1 432 aa11.76□□□□□ -0.53
DDX41-215ENST00000512431 ERI2A8K979 691 aaKnown RBP11.76□□□□□ -0.53
DDX41-215ENST00000512431 FAM47E-STBD1D6RA91 191 aa11.76□□□□□ -0.53
DDX41-215ENST00000512431 H7BY64 318 aa11.76□□□□□ -0.53
DDX41-215ENST00000512431 ACOT7O00154 380 aa11.76□□□□□ -0.53
DDX41-215ENST00000512431 MYO1CO00159 1063 aa11.76□□□□□ -0.53
DDX41-215ENST00000512431 SMAPO00193 183 aa11.76□□□□□ -0.53
DDX41-215ENST00000512431 BCKDKO14874 412 aa11.76□□□□□ -0.53
DDX41-215ENST00000512431 STATHP02808 62 aa11.76□□□□□ -0.53
DDX41-215ENST00000512431 HEXAP06865 529 aa11.76□□□□□ -0.53
DDX41-215ENST00000512431 HRH2P25021 359 aa11.76□□□□□ -0.53
DDX41-215ENST00000512431 RPS15AP62244 130 aaKnown RBP11.76□□□□□ -0.53
DDX41-215ENST00000512431 MEF2AQ02078 507 aaPredicted RBP11.76□□□□□ -0.53
DDX41-215ENST00000512431 PLGLB1Q02325 96 aa11.76□□□□□ -0.53
DDX41-215ENST00000512431 ACVR1Q04771 509 aa11.76□□□□□ -0.53
DDX41-215ENST00000512431 DEFB113Q30KQ7 82 aa11.76□□□□□ -0.53
DDX41-215ENST00000512431 SLC25A35Q3KQZ1 300 aa11.76□□□□□ -0.53
DDX41-215ENST00000512431 EMC4Q5J8M3 183 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms