RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 CCM2Q9BSQ5 444 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 SPON2Q9BUD6 331 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 TPT1P8Q9HAU6 139 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 DIABLOQ9NR28 239 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 THSD1Q9NS62 852 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 IMPAD1Q9NX62 359 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 MAPRE3Q9UPY8 281 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 GPX5O75715 221 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 SCG5P05408 212 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 ZDHHC11BP0C7U3 371 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 COL6A1P12109 1028 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 IDH2P48735 452 aaKnown RBP17.13■□□□□ 0.33
NUP54-205ENST00000507257 P2RX3P56373 397 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 PSPHP78330 225 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 PURAQ00577 322 aaKnown RBP17.13■□□□□ 0.33
NUP54-205ENST00000507257 MGAT3Q09327 533 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 DSC3Q14574 896 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 ZNF79Q15937 498 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 TIGD3Q6B0B8 471 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 TRIM69Q86WT6 500 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 TCTE3Q8IZS6 198 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 CFAP52Q8N1V2 620 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 MTFMTQ96DP5 389 aaKnown RBP17.13■□□□□ 0.33
NUP54-205ENST00000507257 MS4A12Q9NXJ0 267 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 MUTYHQ9UIF7 546 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 BTNL2Q9UIR0 455 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 TSR3Q9UJK0 312 aaKnown RBP17.13■□□□□ 0.33
NUP54-205ENST00000507257 SNX7Q9UNH6 387 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 DUSP12Q9UNI6 340 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 ALPK3Q96L96 1907 aa17.13■□□□□ 0.33
NUP54-205ENST00000507257 KRT87PA6NCN2 255 aa17.12■□□□□ 0.33
NUP54-205ENST00000507257 ARRDC5A6NEK1 342 aa17.12■□□□□ 0.33
NUP54-205ENST00000507257 TMEM189-UBE2V1I3L0A0 370 aa17.12■□□□□ 0.33
NUP54-205ENST00000507257 GAPDHSO14556 408 aaPredicted RBP17.12■□□□□ 0.33
NUP54-205ENST00000507257 LGI1O95970 557 aa17.12■□□□□ 0.33
NUP54-205ENST00000507257 IGHA2P01877 340 aa17.12■□□□□ 0.33
NUP54-205ENST00000507257 ITGB7P26010 798 aa17.12■□□□□ 0.33
NUP54-205ENST00000507257 HLA-DMAP28067 261 aa17.12■□□□□ 0.33
NUP54-205ENST00000507257 SLC6A4P31645 630 aa17.12■□□□□ 0.33
NUP54-205ENST00000507257 RORCP51449 518 aa17.12■□□□□ 0.33
NUP54-205ENST00000507257 CRISP3P54108 245 aa17.12■□□□□ 0.33
NUP54-205ENST00000507257 HYAL2Q12891 473 aa17.12■□□□□ 0.33
NUP54-205ENST00000507257 SNAP47Q5SQN1 464 aa17.12■□□□□ 0.33
NUP54-205ENST00000507257 LDLRAD1Q5T700 205 aa17.12■□□□□ 0.33
NUP54-205ENST00000507257 PLAG1Q6DJT9 500 aa17.12■□□□□ 0.33
NUP54-205ENST00000507257 CHST9Q7L1S5 443 aa17.12■□□□□ 0.33
NUP54-205ENST00000507257 RASAL3Q86YV0 1011 aa17.12■□□□□ 0.33
NUP54-205ENST00000507257 SLC44A2Q8IWA5 706 aaPredicted RBP17.12■□□□□ 0.33
NUP54-205ENST00000507257 PEX5LQ8IYB4 626 aa17.12■□□□□ 0.33
NUP54-205ENST00000507257 EGLN2Q96KS0 407 aa17.12■□□□□ 0.33
NUP54-205ENST00000507257 OR5M11Q96RB7 305 aa17.12■□□□□ 0.33
NUP54-205ENST00000507257 KCNS3Q9BQ31 491 aa17.12■□□□□ 0.33
NUP54-205ENST00000507257 HTATIP2Q9BUP3 242 aa17.12■□□□□ 0.33
NUP54-205ENST00000507257 ASPNQ9BXN1 380 aa17.12■□□□□ 0.33
NUP54-205ENST00000507257 GPR63Q9BZJ6 419 aa17.12■□□□□ 0.33
NUP54-205ENST00000507257 AP5M1Q9H0R1 490 aa17.12■□□□□ 0.33
NUP54-205ENST00000507257 TMEM184CQ9NVA4 438 aa17.12■□□□□ 0.33
NUP54-205ENST00000507257 SEC14L4Q9UDX3 406 aa17.12■□□□□ 0.33
NUP54-205ENST00000507257 ZFP37Q9Y6Q3 630 aaPredicted RBP17.12■□□□□ 0.33
NUP54-205ENST00000507257 GPR39O43194 453 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 HSMCR30P0CW71 290 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 ERP29P30040 261 aaKnown RBP17.11■□□□□ 0.33
NUP54-205ENST00000507257 CDC42P60953 191 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 TAF10Q12962 218 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 PRAMEF19Q5SWL8 479 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 RNLSQ5VYX0 342 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 VWA5B2Q8N398 1253 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 KIAA1143Q96AT1 154 aaPredicted RBP17.11■□□□□ 0.33
NUP54-205ENST00000507257 EID2BQ96D98 161 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 APOLD1Q96LR9 279 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 OPALINQ96PE5 141 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 TSEN34Q9BSV6 310 aaKnown RBP17.11■□□□□ 0.33
NUP54-205ENST00000507257 FNDC3AQ9Y2H6 1198 aaKnown RBP17.11■□□□□ 0.33
NUP54-205ENST00000507257 PRSS21Q9Y6M0 314 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 C1orf226A1L170 272 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 NT5C1B-RDH14C9J2C7 533 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 LRATO95237 230 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 PRAMEF1O95521 474 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 C1QCP02747 245 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 ITGALP20701 1170 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 ACRV1P26436 265 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 GRK4P32298 578 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 HMGA2P52926 109 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 LRRC74AQ0VAA2 488 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 SLAMF1Q13291 335 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 NFATC2Q13469 925 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 ARHGEF7Q14155 803 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 MED22Q15528 200 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 BAK1Q16611 211 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 GLYR1Q49A26 553 aaPredicted RBP17.11■□□□□ 0.33
NUP54-205ENST00000507257 CAMKMTQ7Z624 323 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 GDPD1Q8N9F7 314 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 C11orf65Q8NCR3 313 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 ZFAND1Q8TCF1 268 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 HCAR2Q8TDS4 363 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 BTN2A2Q8WVV5 523 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 DMRTB1Q96MA1 342 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 DPH2Q9BQC3 489 aaPredicted RBP17.11■□□□□ 0.33
NUP54-205ENST00000507257 TTYH2Q9BSA4 534 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 BOCQ9BWV1 1114 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms