RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 KRT6CP48668 564 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 ACADVLP49748 655 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 HK2P52789 917 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 LIMK1P53667 647 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 AQP5P55064 265 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 ARF3P61204 181 aaPredicted RBP5.69□□□□□ -1.5
USP39-213ENST00000467885 REEP5Q00765 189 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 E2F1Q01094 437 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 TBL3Q12788 808 aaKnown RBP5.69□□□□□ -1.5
USP39-213ENST00000467885 BIRC2Q13490 618 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 SLBPQ14493 270 aaKnown RBP eCLIP5.69□□□□□ -1.5
USP39-213ENST00000467885 RBBP5Q15291 538 aaKnown RBP5.69□□□□□ -1.5
USP39-213ENST00000467885 TERF2Q15554 542 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 TRIP6Q15654 476 aaKnown RBP5.69□□□□□ -1.5
USP39-213ENST00000467885 CLPPQ16740 277 aaPredicted RBP5.69□□□□□ -1.5
USP39-213ENST00000467885 HIST2H2ACQ16777 129 aaPredicted RBP5.69□□□□□ -1.5
USP39-213ENST00000467885 LSM12Q3MHD2 195 aaKnown RBP5.69□□□□□ -1.5
USP39-213ENST00000467885 RFTN2Q52LD8 501 aaPredicted RBP5.69□□□□□ -1.5
USP39-213ENST00000467885 SGO1Q5FBB7 561 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 XKR7Q5GH72 579 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 PAGE2BQ5JRK9 111 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 C6orf136Q5SQH8 315 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 MANEAQ5SRI9 462 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 CACHD1Q5VU97 1274 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 METTL21CQ5VZV1 264 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 HIST2H2AA3Q6FI13 130 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 FRMPD2BQ6IN97 320 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 ARMC6Q6NXE6 501 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 IRGCQ6NXR0 463 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 FAM92BQ6ZTR7 304 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 CHSY3Q70JA7 882 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 VN1R4Q7Z5H5 301 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 TMPRSS11BQ86T26 416 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 NAXDQ8IW45 347 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 CARFQ8N187 725 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 KRT78Q8N1N4 520 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 ARHGEF39Q8N4T4 335 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 ANKS4BQ8N8V4 417 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 OR4D9Q8NGE8 314 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 ACTRT2Q8TDY3 377 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 TWIST2Q8WVJ9 160 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 NAT6Q93015 286 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 AHCYL2Q96HN2 611 aaKnown RBP5.69□□□□□ -1.5
USP39-213ENST00000467885 SLC41A2Q96JW4 573 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 MAGEB10Q96LZ2 347 aaPredicted RBP5.69□□□□□ -1.5
USP39-213ENST00000467885 OR52B2Q96RD2 323 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 F2RL3Q96RI0 385 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 CD180Q99467 661 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 MTERF1Q99551 399 aaKnown RBP5.69□□□□□ -1.5
USP39-213ENST00000467885 CDC6Q99741 560 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 CCT7Q99832 543 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 TRIM55Q9BYV6 548 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 NUF2Q9BZD4 464 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 SPRTNQ9H040 489 aaPredicted RBP5.69□□□□□ -1.5
USP39-213ENST00000467885 KLHL31Q9H511 634 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 AKTIPQ9H8T0 292 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 NPHS2Q9NP85 383 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 PRDM7Q9NQW5 492 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 SIRT5Q9NXA8 310 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 KLHL14Q9P2G3 628 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 ANKMY1Q9P2S6 941 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 MARCOQ9UEW3 520 aaPredicted RBP5.69□□□□□ -1.5
USP39-213ENST00000467885 ADGRE2Q9UHX3 823 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 ZFP69BQ9UJL9 534 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 DCTN4Q9UJW0 460 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 PPT2Q9UMR5 302 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 SNX6Q9UNH7 406 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 BTRCQ9Y297 605 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 PTGDR2Q9Y5Y4 395 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 ZFHX2Q9C0A1 2572 aaPredicted RBP5.69□□□□□ -1.5
USP39-213ENST00000467885 CACNA1EQ15878 2313 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 USP34Q70CQ2 3546 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 FANCMQ8IYD8 2048 aa5.69□□□□□ -1.5
USP39-213ENST00000467885 A0A0J9YVX5 310 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 ANKDD1BA6NHY2 528 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 TRPC5OSA6NMA1 111 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 ZW10O43264 779 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 PEX11AO75192 247 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 CLEC3AO75596 197 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 ZBTB11O95625 1053 aaPredicted RBP5.68□□□□□ -1.5
USP39-213ENST00000467885 RPLP0P05388 317 aaKnown RBP5.68□□□□□ -1.5
USP39-213ENST00000467885 SERPINA6P08185 405 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 MSL3P1P0C860 447 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 NELFEP18615 380 aaKnown RBP5.68□□□□□ -1.5
USP39-213ENST00000467885 CDH3P22223 829 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 PRPH2P23942 346 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 HMOX2P30519 316 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 GSK3AP49840 483 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 ARFIP2P53365 341 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 RPS15AP62244 130 aaKnown RBP5.68□□□□□ -1.5
USP39-213ENST00000467885 RPS13P62277 151 aaKnown RBP5.68□□□□□ -1.5
USP39-213ENST00000467885 RAE1P78406 368 aaKnown RBP5.68□□□□□ -1.5
USP39-213ENST00000467885 HSD11B2P80365 405 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 DAB2P98082 770 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 HMGCS1Q01581 520 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 EMX2Q04743 252 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 IFT88Q13099 833 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 ILKQ13418 452 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 CUL3Q13618 768 aa5.68□□□□□ -1.5
USP39-213ENST00000467885 SMU1Q2TAY7 513 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 257.8 ms