RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 MS4A12Q9NXJ0 267 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 CCDC59Q9P031 241 aaKnown RBP11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 NDUFAF4Q9P032 175 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 TBC1D24Q9ULP9 559 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 N6AMT1Q9Y5N5 214 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 CFAP20Q9Y6A4 193 aaKnown RBP11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 NPIPB15A6NHN6 443 aaPredicted RBP11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 MED26O95402 600 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 ETHE1O95571 254 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 SLC10A3P09131 477 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 CYBAP13498 195 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 PTPN2P17706 415 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 GABRB1P18505 474 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 PRPH2P23942 346 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 MAPK1P28482 360 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 RACK1P63244 317 aaKnown RBP11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 DMPKQ09013 629 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 CHIT1Q13231 466 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 MED22Q15528 200 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 TSTQ16762 297 aaKnown RBP11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 EXOC3L2Q2M3D2 409 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 ATAD3CQ5T2N8 411 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 ERICH5Q6P6B1 374 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 ANGPTL8Q6UXH0 198 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 SLC24A5Q71RS6 500 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 B3GNT7Q8NFL0 401 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 KBTBD8Q8NFY9 601 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 DMRTB1Q96MA1 342 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 COPS8Q99627 209 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 BOLA1Q9Y3E2 137 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 PCDHB11Q9Y5F2 797 aa11.32□□□□□ -0.6
PDZRN3-203ENST00000462146 AOC2O75106 756 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 PRPS1L1P21108 318 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 SLC6A12P48065 614 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 SPIBQ01892 262 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 BOP1Q14137 746 aaKnown RBP11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 GGTA1PQ4G0N0 100 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 ATP13A5Q4VNC0 1218 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 COX20Q5RI15 118 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 HECTD3Q5T447 861 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 C10orf62Q5T681 223 aaPredicted RBP11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 AGAP6Q5VW22 663 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 ZNF605Q86T29 641 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 FOXJ1Q92949 421 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 AGAP4Q96P64 663 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 TMEM121BQ9BXQ6 578 aaPredicted RBP11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 PLCXD1Q9NUJ7 323 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 PCDHGB3Q9Y5G1 929 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 LINC00854A0A1B0GVQ3 168 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 IDH3BO43837 385 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 MTX2O75431 263 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 SPAM1P38567 509 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 PIK3CBP42338 1070 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 TGM4P49221 684 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 OR2B6P58173 313 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 HKDC1Q2TB90 917 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 SERPINA13PQ6UXR4 307 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 TPGS1Q6ZTW0 290 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 LRRC70Q7Z2Q7 622 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 NRARPQ7Z6K4 114 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 CCDC190Q86UF4 302 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 LGI4Q8N135 537 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 L3MBTL4Q8NA19 623 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 OR6F1Q8NGZ6 308 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 GTPBP3Q969Y2 492 aaKnown RBP11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 COL21A1Q96P44 957 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 YME1L1Q96TA2 773 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 DUSP26Q9BV47 211 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 CWH43Q9H720 699 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 KCTD5Q9NXV2 234 aa11.31□□□□□ -0.6
PDZRN3-203ENST00000462146 C1orf226A1L170 272 aa11.3□□□□□ -0.6
PDZRN3-203ENST00000462146 ANKRD34BA5PLL1 514 aa11.3□□□□□ -0.6
PDZRN3-203ENST00000462146 H3BM21 787 aa11.3□□□□□ -0.6
PDZRN3-203ENST00000462146 ZW10O43264 779 aa11.3□□□□□ -0.6
PDZRN3-203ENST00000462146 BNIP3LO60238 219 aa11.3□□□□□ -0.6
PDZRN3-203ENST00000462146 ADAMTS4O75173 837 aa11.3□□□□□ -0.6
PDZRN3-203ENST00000462146 MFN2O95140 757 aa11.3□□□□□ -0.6
PDZRN3-203ENST00000462146 EIF2S1P05198 315 aaKnown RBP11.3□□□□□ -0.6
PDZRN3-203ENST00000462146 SLC11A1P49279 550 aa11.3□□□□□ -0.6
PDZRN3-203ENST00000462146 RGNQ15493 299 aa11.3□□□□□ -0.6
PDZRN3-203ENST00000462146 LRRC26Q2I0M4 334 aa11.3□□□□□ -0.6
PDZRN3-203ENST00000462146 FUT10Q6P4F1 479 aa11.3□□□□□ -0.6
PDZRN3-203ENST00000462146 CPA6Q8N4T0 437 aa11.3□□□□□ -0.6
PDZRN3-203ENST00000462146 BCL7CQ8WUZ0 217 aaPredicted RBP11.3□□□□□ -0.6
PDZRN3-203ENST00000462146 POP5Q969H6 163 aaKnown RBP11.3□□□□□ -0.6
PDZRN3-203ENST00000462146 DOHHQ9BU89 302 aa11.3□□□□□ -0.6
PDZRN3-203ENST00000462146 TTLL2Q9BWV7 592 aa11.3□□□□□ -0.6
PDZRN3-203ENST00000462146 CEP44Q9C0F1 390 aa11.3□□□□□ -0.6
PDZRN3-203ENST00000462146 GPATCH2Q9NW75 528 aa11.3□□□□□ -0.6
PDZRN3-203ENST00000462146 DUSP12Q9UNI6 340 aa11.3□□□□□ -0.6
PDZRN3-203ENST00000462146 TMEM98Q9Y2Y6 226 aa11.3□□□□□ -0.6
PDZRN3-203ENST00000462146 OR51B4Q9Y5P0 310 aa11.3□□□□□ -0.6
PDZRN3-203ENST00000462146 GABRR3A8MPY1 467 aa11.3□□□□□ -0.6
PDZRN3-203ENST00000462146 FAM227AF5H4B4 570 aa11.3□□□□□ -0.6
PDZRN3-203ENST00000462146 PCDH17O14917 1159 aa11.3□□□□□ -0.6
PDZRN3-203ENST00000462146 RGS13O14921 159 aa11.3□□□□□ -0.6
PDZRN3-203ENST00000462146 HOXC11O43248 304 aaPredicted RBP11.3□□□□□ -0.6
PDZRN3-203ENST00000462146 NDUFB5O43674 189 aa11.3□□□□□ -0.6
PDZRN3-203ENST00000462146 GUCY1B2O75343 617 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 170.6 ms