RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 GALPQ9UBC7 116 aa16.12■□□□□ 0.17
UBE2D4-209ENST00000454428 TCAF1Q9Y4C2 921 aa16.12■□□□□ 0.17
UBE2D4-209ENST00000454428 CDK2AP1O14519 115 aa16.11■□□□□ 0.17
UBE2D4-209ENST00000454428 TFECO14948 347 aaPredicted RBP16.11■□□□□ 0.17
UBE2D4-209ENST00000454428 KPNA5O15131 536 aa16.11■□□□□ 0.17
UBE2D4-209ENST00000454428 CD3EAPO15446 510 aaKnown RBP16.11■□□□□ 0.17
UBE2D4-209ENST00000454428 PSIP1O75475 530 aaKnown RBP16.11■□□□□ 0.17
UBE2D4-209ENST00000454428 TRHRP34981 398 aaPredicted RBP16.11■□□□□ 0.17
UBE2D4-209ENST00000454428 PPARGP37231 505 aaPredicted RBP16.11■□□□□ 0.17
UBE2D4-209ENST00000454428 CYB561P49447 251 aa16.11■□□□□ 0.17
UBE2D4-209ENST00000454428 TTPAP49638 278 aa16.11■□□□□ 0.17
UBE2D4-209ENST00000454428 ITGA8P53708 1063 aa16.11■□□□□ 0.17
UBE2D4-209ENST00000454428 MLF1P58340 268 aa16.11■□□□□ 0.17
UBE2D4-209ENST00000454428 PRAMEP78395 509 aa16.11■□□□□ 0.17
UBE2D4-209ENST00000454428 TSTA3Q13630 321 aaPredicted RBP16.11■□□□□ 0.17
UBE2D4-209ENST00000454428 TRIM14Q14142 442 aa16.11■□□□□ 0.17
UBE2D4-209ENST00000454428 ARHGAP19Q14CB8 494 aa16.11■□□□□ 0.17
UBE2D4-209ENST00000454428 NSDHLQ15738 373 aa16.11■□□□□ 0.17
UBE2D4-209ENST00000454428 ANKRD20A4Q4UJ75 823 aa16.11■□□□□ 0.17
UBE2D4-209ENST00000454428 AARS2Q5JTZ9 985 aaKnown RBP16.11■□□□□ 0.17
UBE2D4-209ENST00000454428 TMEM214Q6NUQ4 689 aaKnown RBP16.11■□□□□ 0.17
UBE2D4-209ENST00000454428 SPNS2Q8IVW8 549 aa16.11■□□□□ 0.17
UBE2D4-209ENST00000454428 LRRC56Q8IYG6 542 aaPredicted RBP16.11■□□□□ 0.17
UBE2D4-209ENST00000454428 PKP4Q99569 1192 aa16.11■□□□□ 0.17
UBE2D4-209ENST00000454428 LPAR4Q99677 370 aa16.11■□□□□ 0.17
UBE2D4-209ENST00000454428 RBCK1Q9BYM8 510 aa16.11■□□□□ 0.17
UBE2D4-209ENST00000454428 PLEKHA6Q9Y2H5 1048 aa16.11■□□□□ 0.17
UBE2D4-209ENST00000454428 FAM237BA0A1B0GVD1 139 aa16.1■□□□□ 0.17
UBE2D4-209ENST00000454428 E7ENX8 843 aa16.1■□□□□ 0.17
UBE2D4-209ENST00000454428 CDC40O60508 579 aaKnown RBP eCLIP16.1■□□□□ 0.17
UBE2D4-209ENST00000454428 RDH16O75452 317 aa16.1■□□□□ 0.17
UBE2D4-209ENST00000454428 CDC123O75794 336 aaPredicted RBP16.1■□□□□ 0.17
UBE2D4-209ENST00000454428 TJP3O95049 919 aa16.1■□□□□ 0.17
UBE2D4-209ENST00000454428 SLC16A8O95907 504 aa16.1■□□□□ 0.17
UBE2D4-209ENST00000454428 MAGEA1P43355 309 aa16.1■□□□□ 0.17
UBE2D4-209ENST00000454428 HLCSP50747 726 aa16.1■□□□□ 0.17
UBE2D4-209ENST00000454428 PNLIPRP1P54315 467 aa16.1■□□□□ 0.17
UBE2D4-209ENST00000454428 TAS2R50P59544 299 aa16.1■□□□□ 0.17
UBE2D4-209ENST00000454428 TAP2Q03519 686 aa16.1■□□□□ 0.17
UBE2D4-209ENST00000454428 Q71RC1 249 aaPredicted RBP16.1■□□□□ 0.17
UBE2D4-209ENST00000454428 OR52N2Q8NGI0 321 aa16.1■□□□□ 0.17
UBE2D4-209ENST00000454428 ZNF480Q8WV37 535 aa16.1■□□□□ 0.17
UBE2D4-209ENST00000454428 MRFAP1L1Q96HT8 127 aa16.1■□□□□ 0.17
UBE2D4-209ENST00000454428 ALPK1Q96QP1 1244 aa16.1■□□□□ 0.17
UBE2D4-209ENST00000454428 MDFIQ99750 246 aa16.1■□□□□ 0.17
UBE2D4-209ENST00000454428 POLDIP3Q9BY77 421 aaKnown RBP16.1■□□□□ 0.17
UBE2D4-209ENST00000454428 CHRAC1Q9NRG0 131 aa16.1■□□□□ 0.17
UBE2D4-209ENST00000454428 ANK3Q12955 4377 aaKnown RBP16.09■□□□□ 0.17
UBE2D4-209ENST00000454428 KCNE1BA0A087WTH5 132 aa16.09■□□□□ 0.17
UBE2D4-209ENST00000454428 MAGEB17A8MXT2 336 aa16.09■□□□□ 0.17
UBE2D4-209ENST00000454428 GOLGA6L22H0YM25 854 aa16.09■□□□□ 0.17
UBE2D4-209ENST00000454428 H7BY64 318 aa16.09■□□□□ 0.17
UBE2D4-209ENST00000454428 NIPSNAP2O75323 286 aa16.09■□□□□ 0.17
UBE2D4-209ENST00000454428 ZNF189O75820 626 aaPredicted RBP16.09■□□□□ 0.17
UBE2D4-209ENST00000454428 PDE9AO76083 593 aa16.09■□□□□ 0.17
UBE2D4-209ENST00000454428 CCNDBP1O95273 360 aa16.09■□□□□ 0.17
UBE2D4-209ENST00000454428 ATP5DP30049 168 aa16.09■□□□□ 0.17
UBE2D4-209ENST00000454428 ACTN3Q08043 901 aaPredicted RBP16.09■□□□□ 0.17
UBE2D4-209ENST00000454428 ACSBG2Q5FVE4 666 aa16.09■□□□□ 0.17
UBE2D4-209ENST00000454428 ADCK2Q7Z695 626 aa16.09■□□□□ 0.17
UBE2D4-209ENST00000454428 ARMC10Q8N2F6 343 aa16.09■□□□□ 0.17
UBE2D4-209ENST00000454428 SLC35B2Q8TB61 432 aa16.09■□□□□ 0.17
UBE2D4-209ENST00000454428 PEX13Q92968 403 aa16.09■□□□□ 0.17
UBE2D4-209ENST00000454428 FAM136AQ96C01 138 aa16.09■□□□□ 0.17
UBE2D4-209ENST00000454428 PRAP1Q96NZ9 151 aa16.09■□□□□ 0.17
UBE2D4-209ENST00000454428 GPATCH1Q9BRR8 931 aaKnown RBP16.09■□□□□ 0.17
UBE2D4-209ENST00000454428 ETNK1Q9HBU6 452 aa16.09■□□□□ 0.17
UBE2D4-209ENST00000454428 UTP6Q9NYH9 597 aaKnown RBP16.09■□□□□ 0.17
UBE2D4-209ENST00000454428 FEZF1A0PJY2 475 aa16.08■□□□□ 0.16
UBE2D4-209ENST00000454428 SMAPO00193 183 aa16.08■□□□□ 0.16
UBE2D4-209ENST00000454428 PEX1O43933 1283 aa16.08■□□□□ 0.16
UBE2D4-209ENST00000454428 PRMT3O60678 531 aa16.08■□□□□ 0.16
UBE2D4-209ENST00000454428 DNAJB6O75190 326 aa16.08■□□□□ 0.16
UBE2D4-209ENST00000454428 EIF3BP55884 814 aaKnown RBP16.08■□□□□ 0.16
UBE2D4-209ENST00000454428 RWDD2BP57060 319 aa16.08■□□□□ 0.16
UBE2D4-209ENST00000454428 OR4D2P58180 307 aa16.08■□□□□ 0.16
UBE2D4-209ENST00000454428 ABATP80404 500 aa16.08■□□□□ 0.16
UBE2D4-209ENST00000454428 KLF1Q13351 362 aaPredicted RBP16.08■□□□□ 0.16
UBE2D4-209ENST00000454428 KCNJ11Q14654 390 aa16.08■□□□□ 0.16
UBE2D4-209ENST00000454428 LRRC6Q86X45 466 aa16.08■□□□□ 0.16
UBE2D4-209ENST00000454428 LIX1LQ8IVB5 337 aa16.08■□□□□ 0.16
UBE2D4-209ENST00000454428 VSTM4Q8IW00 320 aa16.08■□□□□ 0.16
UBE2D4-209ENST00000454428 ZZZ3Q8IYH5 903 aa16.08■□□□□ 0.16
UBE2D4-209ENST00000454428 CLYBLQ8N0X4 340 aa16.08■□□□□ 0.16
UBE2D4-209ENST00000454428 ZFP62Q8NB50 900 aaPredicted RBP16.08■□□□□ 0.16
UBE2D4-209ENST00000454428 KCT2Q8NC54 265 aa16.08■□□□□ 0.16
UBE2D4-209ENST00000454428 OR5T3Q8NGG3 340 aa16.08■□□□□ 0.16
UBE2D4-209ENST00000454428 TM4SF19Q96DZ7 209 aa16.08■□□□□ 0.16
UBE2D4-209ENST00000454428 PEX11GQ96HA9 241 aa16.08■□□□□ 0.16
UBE2D4-209ENST00000454428 SLC24A3Q9HC58 644 aa16.08■□□□□ 0.16
UBE2D4-209ENST00000454428 TREX1Q9NSU2 369 aa16.08■□□□□ 0.16
UBE2D4-209ENST00000454428 ABCF3Q9NUQ8 709 aa16.08■□□□□ 0.16
UBE2D4-209ENST00000454428 ANAPC5Q9UJX4 755 aa16.08■□□□□ 0.16
UBE2D4-209ENST00000454428 KLF13Q9Y2Y9 288 aaPredicted RBP16.08■□□□□ 0.16
UBE2D4-209ENST00000454428 GTF3C3Q9Y5Q9 886 aa16.08■□□□□ 0.16
UBE2D4-209ENST00000454428 FBN1P35555 2871 aaKnown RBP16.08■□□□□ 0.16
UBE2D4-209ENST00000454428 TCRBV7S2A1N4TA0A589 114 aa16.07■□□□□ 0.16
UBE2D4-209ENST00000454428 SYCE3A1L190 88 aa16.07■□□□□ 0.16
UBE2D4-209ENST00000454428 USP27XA6NNY8 438 aa16.07■□□□□ 0.16
UBE2D4-209ENST00000454428 ERI2A8K979 691 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms